Basic Information

Insect: Glossina fuscipes
Gene Symbol: -
Assembly: None
Location: Scaffold455:191620-209693[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.017 15.7 3.4 1 23 207 229 207 229 0.98

2 11 0.0011 0.086 13.5 10.5 1 23 235 257 235 257 0.96

3 11 8e-05 0.0064 17.0 6.6 1 23 263 285 263 285 0.98

4 11 0.00011 0.0087 16.6 1.5 1 23 291 313 291 313 0.95

5 11 1.6e-05 0.0013 19.2 0.5 1 23 319 341 319 341 0.97

6 11 3.9e-06 0.00031 21.2 0.2 1 23 347 369 347 369 0.98

7 11 0.00013 0.011 16.3 2.0 1 23 374 397 374 397 0.97

8 11 0.00077 0.062 13.9 0.4 1 23 403 426 403 426 0.91

9 11 0.0036 0.29 11.8 0.2 3 23 510 530 508 530 0.97

10 11 0.016 1.3 9.8 2.7 1 23 650 672 650 672 0.95

11 11 0.0047 0.38 11.4 4.9 5 23 685 703 677 703 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.017	15.7	3.4	1	23	207	229	207	229	0.98
2	11	0.0011	0.086	13.5	10.5	1	23	235	257	235	257	0.96
3	11	8e-05	0.0064	17.0	6.6	1	23	263	285	263	285	0.98
4	11	0.00011	0.0087	16.6	1.5	1	23	291	313	291	313	0.95
5	11	1.6e-05	0.0013	19.2	0.5	1	23	319	341	319	341	0.97
6	11	3.9e-06	0.00031	21.2	0.2	1	23	347	369	347	369	0.98
7	11	0.00013	0.011	16.3	2.0	1	23	374	397	374	397	0.97
8	11	0.00077	0.062	13.9	0.4	1	23	403	426	403	426	0.91
9	11	0.0036	0.29	11.8	0.2	3	23	510	530	508	530	0.97
10	11	0.016	1.3	9.8	2.7	1	23	650	672	650	672	0.95
11	11	0.0047	0.38	11.4	4.9	5	23	685	703	677	703	0.92

Sequence Information

Coding Sequence: ATGTGTGCTGCCCAAAGCAATCCAGCCCAGAGTTTCGGTGGTTACACCTGGGGTTTTGCGGATAATAGTCGAGCCGAATCAGTTTTGGAAATATCACCGAATATTAATTATACCGTCAGTAGTGAATCTATGCCCTATTTATTGTCAACAGATGGATCTTTAACGGTACAAAAAGACGTGAAGGGTGCTTTGGCTGCTAATAAAGGCGTTGTACGCCGTATGGTATTGGTGAACGATCCCTTTGCAACAGGAGCTCAGAGAGTTATAACGGGTGCCTCGTCGTCGGTTGTCAAGAAGCCAGATCAACAAGTTTTGAGTTTAAATTGCGATAAAAACTATCTTCTTGTAGACCAAACGGATCAATCTCATTCTCTTGCCAATGGCATTGTGGATCCCAAGGCTCAGACAATATTAACAACCGCTGCAGGTGATATATTGCCTGGCATATCAGTGCAAGTACAAAAAGTCATACAGGGTCTTGAGGACAATGATGAATCGCAAGGCGAAGCCCCTAACTTGAAGTTGGAACCGGGCACTTTAGACATGTCACCGAAAGCCGAATTACAAGAAAATATCAACTTTAGTGATAATGATACCACTATTAAAAAGGAACGTCCTTACAGTTGCGAGGAATGTGGAAAATCATTTCTATTAAAACATCATTTAACTACACACGCTCGCGTTCATACCGGTGAACGCCCCCACATCTGTACACATTGCGGCAAAAGTTTTGCCCACAAACATTGTCTCAATACACATTTGTTATTGCACTCCACCGATCGTCCCTATCAGTGCACCGAGTGCAAGAAGAGTTTTACGCTGAAACATCATCTGTTAACACACTCACGTGTACATTCGCGTGATCGGCCGTTTATATGTCCAGAATGCGGGCGTTCTTTCCCCCTCAAACGCCATCTGGTAACACATAGCAAATTCCACGCTGGTGAGAGGCCGTATGTATGCGAGGATTGCGGTGAAAGCTTTGCCCAAGAAAATCATCTAATTATGCATTCACGATTCCATGGTTCAGTGAATCCGTTCGTTTGTCAGGATTGTGGTGTTACATTTCCCCGCAAGTTTCAATTAGTGAACCATGCACGCATTCACGGCAAAATACCTCACTCGTGCACAGTTTGTGGCAAAGAATTCTTACAGAAACGTACTCTAGTGTCGCACATGCGTAGAGTTCATACGGGCGATCAGCCCTATCCTTGCATTAGTTGTGGCGAGGGCTTTATGACGAAGGCAGATTTGAATCATCATATACGTAGTACTCACGGTGGTGTTAATCCGAATTCCTCAAATACCGCCATAGTACCAACAAATACCATGATAAGCTCCCAACAGCCCACCCAACCAATACAGCAAATACATCAGACTCAGGCTCACACGACACAGCAGCAGCATCAACAGCAGACGCATCAATCACAAAACAATCATCCACAAACCATAACGGTTGTCAGCAATCCCAACAGTTCGGCTTTATTAACGGTAACATCAAACGATCCCAATCGACCTCAATACGGATGCCGTGAATGTGGAAGTGCCTTTAACAGTCGTGAAGCCTTTGCTTTACATCAGCGTTTGCACACGGGCGATAAAAATTTGATGACCGATTTGTGTGCACTGACGGCCGCACTACCGCCACATTTCCTCAGTACGGCTAGTTTAAATCCGGGTGCTGTACCTGTTGTAGCCAATCCAAGCATTATAGCGCAAAATCAGATGCCAGTGCAAATCATATCATCGACGGGTCAGGTAATGTCACAAACAACATTGGTGCAGGCTGCTGCCACTACACATCCACAGTCAGTTGTGGCCGCTGTACCCACCGTAACGGTACAGCCTCATCATCATACCAATACCCAGCAATTGCAAAATGGTAATACTACGGCCCAACATCAACAGCCACAGCATCAACAGCAGACGCAGAATAAACCGAAATCACATTTCTGTGCCAGTTGTGGTAAAGGATTTGCGGCTAAACATGGCCTTATGCAGCATAATCGACGCCATCCGAACGGCGGTTGCACCGTACGTACACACGTTTGCGAGTGCGGTAAAGCATTCTTCCAAAAGAATCACTTAATGTTGCATCAGCGTCAGCATTTGGAAACTAAACCTGCCATTTCCCAACAACAGCAGAATGCGAATgcacagcagcagcagcagcaacagcaacagcagcagcaacaacaacaacagttagtccaacagcagcaacaaagtcaacaacaacaacaacaacaacaacagcagcagcagcagcatcaacagcaacaacaacaacaacaacaacaacaaATGAATACTAGAGAAGTTATGATTGGCAATCAAGCGGTACACGTGCAAGTATTGCAAGGAACAAATACCGCACAAGTTATTAAATATGAACTTAACCTACCACGTGGTGAACCaaagcattaa
Protein Sequence: MCAAQSNPAQSFGGYTWGFADNSRAESVLEISPNINYTVSSESMPYLLSTDGSLTVQKDVKGALAANKGVVRRMVLVNDPFATGAQRVITGASSSVVKKPDQQVLSLNCDKNYLLVDQTDQSHSLANGIVDPKAQTILTTAAGDILPGISVQVQKVIQGLEDNDESQGEAPNLKLEPGTLDMSPKAELQENINFSDNDTTIKKERPYSCEECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTDRPYQCTECKKSFTLKHHLLTHSRVHSRDRPFICPECGRSFPLKRHLVTHSKFHAGERPYVCEDCGESFAQENHLIMHSRFHGSVNPFVCQDCGVTFPRKFQLVNHARIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGDQPYPCISCGEGFMTKADLNHHIRSTHGGVNPNSSNTAIVPTNTMISSQQPTQPIQQIHQTQAHTTQQQHQQQTHQSQNNHPQTITVVSNPNSSALLTVTSNDPNRPQYGCRECGSAFNSREAFALHQRLHTGDKNLMTDLCALTAALPPHFLSTASLNPGAVPVVANPSIIAQNQMPVQIISSTGQVMSQTTLVQAAATTHPQSVVAAVPTVTVQPHHHTNTQQLQNGNTTAQHQQPQHQQQTQNKPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPAISQQQQNANAQQQQQQQQQQQQQQQQLVQQQQQSQQQQQQQQQQQQQHQQQQQQQQQQQMNTREVMIGNQAVHVQVLQGTNTAQVIKYELNLPRGEPKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01114441;
90% Identity: iTF_00747654;
80% Identity: iTF_00749144;