Basic Information

Insect: Ornithomya chloropus
Gene Symbol: -
Assembly: GCA_963971445.1
Location: OZ020529.1:942547-946901[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00016 0.014 16.2 1.3 1 23 200 222 200 222 0.95

2 15 0.62 52 5.0 2.5 3 23 230 250 228 250 0.95

3 15 0.00049 0.041 14.7 0.1 1 23 391 413 391 413 0.98

4 15 0.0016 0.14 13.1 0.4 1 23 419 441 419 441 0.99

5 15 0.00038 0.032 15.1 3.8 1 23 477 499 477 499 0.97

6 15 0.0039 0.32 11.9 0.6 1 23 523 545 523 545 0.94

7 15 0.0049 0.4 11.6 0.1 1 23 551 574 551 574 0.97

8 15 0.34 28 5.8 0.3 5 19 585 599 582 600 0.91

9 15 0.0004 0.033 15.0 6.8 1 23 609 631 609 631 0.97

10 15 0.076 6.3 7.9 0.7 2 23 637 658 636 658 0.97

11 15 1e-05 0.00087 20.0 1.0 1 23 666 688 666 688 0.98

12 15 0.0012 0.098 13.5 0.1 3 23 696 716 694 716 0.97

13 15 0.00036 0.03 15.2 0.5 3 23 724 744 722 745 0.95

14 15 0.16 13 6.9 0.1 1 23 755 777 755 777 0.96

15 15 0.0054 0.44 11.5 0.0 1 20 1288 1307 1288 1310 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00016	0.014	16.2	1.3	1	23	200	222	200	222	0.95
2	15	0.62	52	5.0	2.5	3	23	230	250	228	250	0.95
3	15	0.00049	0.041	14.7	0.1	1	23	391	413	391	413	0.98
4	15	0.0016	0.14	13.1	0.4	1	23	419	441	419	441	0.99
5	15	0.00038	0.032	15.1	3.8	1	23	477	499	477	499	0.97
6	15	0.0039	0.32	11.9	0.6	1	23	523	545	523	545	0.94
7	15	0.0049	0.4	11.6	0.1	1	23	551	574	551	574	0.97
8	15	0.34	28	5.8	0.3	5	19	585	599	582	600	0.91
9	15	0.0004	0.033	15.0	6.8	1	23	609	631	609	631	0.97
10	15	0.076	6.3	7.9	0.7	2	23	637	658	636	658	0.97
11	15	1e-05	0.00087	20.0	1.0	1	23	666	688	666	688	0.98
12	15	0.0012	0.098	13.5	0.1	3	23	696	716	694	716	0.97
13	15	0.00036	0.03	15.2	0.5	3	23	724	744	722	745	0.95
14	15	0.16	13	6.9	0.1	1	23	755	777	755	777	0.96
15	15	0.0054	0.44	11.5	0.0	1	20	1288	1307	1288	1310	0.93

Sequence Information

Coding Sequence: atggATAATAGTGAATATGTTGGTAATAGCATACAATGGATACAACAAGCGGTTACAAGTGCAGCAGATGAGACCACCACAACGACGTCTCAATTATTAATAGATTCGCAATCGTCACAGCCTGATGACCTGATAGTAAATAATAGTTCAACGTGCAGTTTTTTGGGTGTGGGAAATGATGCGGATATAACCAATCTGGACCAAATAGCTGCcgaaaatttaatatttatggcACGTGATGGCAAAGTGACTGAAATTATTACTACGGCTGATACCAATGAAAATGATGTTCTTGTGGTGGCAGCTAGCGATGGTACACAAATTAATTGTGATGGTATTTTGCAACAAGCTGCTTTAATTCAGAATGAAGAATCAAATGATGGAGTTTATGCTGACCATGATCATGTTGATCATTACACCGACAATACACCGCAAATGGTGACGGAAGAAATTATAACAGATGATTGGGTACAACATCAGGGTGAAGAAAGagttGAAATACCAGCCGAGCAAATTATTGGCTCGggttcacatatattattagaTATGGAAGTGCCTTTATCTACTGTACAGGATGAGTATTCAGTTCTTCGACCATACCCTTGTGATTTTTGTAGTCGACGATTTCGCAAAAAAACCAGCCTAATGAATCATATGGTGGCTCATCAAAGTGATCGCCCgcatttatgtaaattatgtAACTCTCGTTTTTTGCGGCGACAAGATTTAATCAATCACCTAAAAGCACATGCCGAAGAAGAACTTCCCATGGAAGATAATGATTACATACATTTCGATGGTGGGGGATCGCCTGGACAGCGCCAAACAAATGATCAATTCTATGAGCAAAGTTGGAGTGTGCCAAGTGAATCGTTACTGGTAAAAAGTAACCTTAAATATAATATCTCAGATATAAACCCTACAACTGCCACCAGTTTAATTCGAGTAAGTCCGCCTAGTGGTTCAAGGGGTCGGATTAGCAGATTAAAGCTTAAGGAAGGAATTTCATATCTAGAGAATTCGCACAATAGCGATATTGGCCAACTGAGCTATGAGAATGATCAACCGATTACCGCCTTGGAGAGTGGCTTGCATTTACAGGATGATTCTAAAGCAAATGTTCAAATGGAATTGCATCGAAAGAGTCTCACGATGGGGAGAAATAAACCGTTTGTGTGTCAACAGTGTGGCTTAGCATTCGCCCGTGAAAAGGCTTTTGTGTCTCATGCCAAGACTCACCGCCAAGATTCGCCGTATGAGTGCAATCAGTGCAATGAACTGTTTTGGGATAACGAGAGCTTGCAGGAACATCAAAAAACTCATTTTTTCGAAGACAGCAACTCTGAATATGATCCCAATGAAGGTGAAAAGGATGATGACGAAGAAACTCAAACGGAATCGGAGGCTGGACAGAAATTATATGGTGATTTTTTTTGCAGCTACTGTGGCATATCGTTTCATCGGTTCGATCTATTGAAGAAACATGCCAAATCGCATAAGGGTGCAGAAATGGATGCTGTGGAGGataaaaacaaagcaaataccagcaacaacaacaaagatcATCATTGCTGTAATACGTGCGGGGAAACATTTACTGAAGCTTTAGATTTATTGGCCCATGCTGAGGTTCATGCCAGATGTCCGCCCTTTAAATGTGTTCTGTGCGGTGAGACGTTTATTGAAGAGCCCACTATAAAGCGGCATCTGCAAGTGCAGCATAGCAGTGAAATGACGGAGAATTCTTGCATACTGTGTGGGAAAGGGTGTCGAGATCGTAAAGCGTTGATTAAGCATGCCTGGGATCATTCACGTGAAAAATGTCACTCATGCTCGAAGTGtggtaaaaattttcataataagGCGCGTCTGAAGCGGCACATGACGTCACATCGTGACAAATCGGTGCAGTGTGAAGTGTGCCGTGAAGAATTCCCAGATGGGCGTACGCTGTCGAATCATCGTCACAGTCACAGCAGCACATCGGGTAAGTTGTTTCCCTGCCACGAGTGCGGCAAAACATTTGGTTCGCGCAGTTCACAGCAGATTCATGTCCGTATACATACTGGGGAACGGCCGTACGGTTGCCGGTACTGTTGGAAGGCATTTGCTGATGGTGGTACTTTACGCAAACACGAACGCATTCATACGGGAGAGAAACCGTATGGCTGTTCGGTGTGTCCCCGGGCCTTTAACCAAAGGGTTGTGTTGCGGGAACACATACGTTCGCATCACTCGGGTTTGGACAATAAACGTGGCACTTACTATTGTACGGTATGCTCTGCTGAAATGTCCTCCTCCCGGGACCTGATACAACATCTCATTGAGCATAGTGATAAGAACACTGCTAAACAAAGGCAGCCGGTGGCTGGCCCACGCAAATATAAACGTCGCCGCAAACTGAAGCCGCACGAGTTGGCTCGCTTGAAGCGCGAAGGTAAATGTTTCGATCTTGAGAATTTCAGTGATTTTGATTTATCGGACATTGACGATTTGCTGTGTTTGAATGACTCCTCTACTGCCACCAATGACAATGAACAATCAGTTAATAAGCAAATCAACTCAaaaaccaacaataacaacaacaataacaatcacattaaacataaatcaCAGCAATCCTACTTGGAAATGGATGCGGATGCGGTAAATCGTGAggatattaataaaaaaagcgcTACAACAACCAGAACGCGGAACATTGGAAAAtctttattaaagaaaaatatccTGCCGACCACGTCTGATTTAGAGATGGACGTAACAGCTAGTACAGAACAACAGAattcaacaacaatgaaaacaacaaatagtttACGCCGTAAATCGAAACAAAATTCCAACGTAACGGAACAGTTACAACCAACTGAGGCACTAGGAAAAGGGAgcaaaattaaaacaataacatCTGTAACGAATCGCCCTCAAATGATACACACAGAAAAACGCAAGGCAACCGTTCCGATGACGGAAAATAGTAATGAAGGAAAtaaaggtaaaaagaaaaaaagaaacatatcaACGCGTGCCATCATTCGCTCGAATATACCTACTCTGCCCAAAACCTCGACAATATTAGACGATTATGATATAATTTCACCACAATCACAACCACCCAATCAAATCAGTTCCAGTCCGTTACGTGTTAAACAagaacacaaacaacaacaaacatatgaacaaaaatctgGCAGCCGGATGAACAGTTGTTCACGTCTAATACAGCAATCAGCAACCAATGATCTGTATGATGCTCATTTATTGTTAGAAGCTTCCGGTTTGCGTCACGATTTGGACGATATGCTGCATTCACCATTGAAGGCGGAAAAGAATGGCGGTCGTCAACGTTTTATCAGTGAGTCGTCATCACAGTTCATGACAGATCGGCCGGAAGAAGAGCAACATCTTATTAAAATCGAACCTACCTCACCCGATTTACGAGAAATCGTTAATTGTGTTAGCACCACCACCAACGATGTAGATCTGGAGTCCTCCTCAATACGCACAAACACAAGATCCAGTGTTCGCGCAGAGCACCTAAGACGTGGCAACGGTAAAGTGGGACAGCAAACGGTGCATACTTCAAAATTTCTGTCATTTCCCACAAACATGGCCAATTCGAATGATATTAATACAAAGTCAAGTACTGCCAACAGCAGCCATTCAAACGCTACTACCTCAAAGTCTGCCTCATCATCGTCCTTTCTAGATTACGGTTATGGCCAAACAGATGTAACGTCTTCTACAAGTAGTGCTAATAGTTCCTTCTCTTCTATAAATGCTGTAGTGTCAGCGGCTGATGCCAATGCAGCAGCGGTTGCTCAACAGAATCCTGCCAATTTGCGTAGACCACGAAGATATTTTGAGTGTGAGATGTGTTCAGCTGTGTTCTCTGATCGTGCCCAACTGCTCGATCATGTGCCCATACACATTTAG
Protein Sequence: MDNSEYVGNSIQWIQQAVTSAADETTTTTSQLLIDSQSSQPDDLIVNNSSTCSFLGVGNDADITNLDQIAAENLIFMARDGKVTEIITTADTNENDVLVVAASDGTQINCDGILQQAALIQNEESNDGVYADHDHVDHYTDNTPQMVTEEIITDDWVQHQGEERVEIPAEQIIGSGSHILLDMEVPLSTVQDEYSVLRPYPCDFCSRRFRKKTSLMNHMVAHQSDRPHLCKLCNSRFLRRQDLINHLKAHAEEELPMEDNDYIHFDGGGSPGQRQTNDQFYEQSWSVPSESLLVKSNLKYNISDINPTTATSLIRVSPPSGSRGRISRLKLKEGISYLENSHNSDIGQLSYENDQPITALESGLHLQDDSKANVQMELHRKSLTMGRNKPFVCQQCGLAFAREKAFVSHAKTHRQDSPYECNQCNELFWDNESLQEHQKTHFFEDSNSEYDPNEGEKDDDEETQTESEAGQKLYGDFFCSYCGISFHRFDLLKKHAKSHKGAEMDAVEDKNKANTSNNNKDHHCCNTCGETFTEALDLLAHAEVHARCPPFKCVLCGETFIEEPTIKRHLQVQHSSEMTENSCILCGKGCRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMTSHRDKSVQCEVCREEFPDGRTLSNHRHSHSSTSGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYGCSVCPRAFNQRVVLREHIRSHHSGLDNKRGTYYCTVCSAEMSSSRDLIQHLIEHSDKNTAKQRQPVAGPRKYKRRRKLKPHELARLKREGKCFDLENFSDFDLSDIDDLLCLNDSSTATNDNEQSVNKQINSKTNNNNNNNNHIKHKSQQSYLEMDADAVNREDINKKSATTTRTRNIGKSLLKKNILPTTSDLEMDVTASTEQQNSTTMKTTNSLRRKSKQNSNVTEQLQPTEALGKGSKIKTITSVTNRPQMIHTEKRKATVPMTENSNEGNKGKKKKRNISTRAIIRSNIPTLPKTSTILDDYDIISPQSQPPNQISSSPLRVKQEHKQQQTYEQKSGSRMNSCSRLIQQSATNDLYDAHLLLEASGLRHDLDDMLHSPLKAEKNGGRQRFISESSSQFMTDRPEEEQHLIKIEPTSPDLREIVNCVSTTTNDVDLESSSIRTNTRSSVRAEHLRRGNGKVGQQTVHTSKFLSFPTNMANSNDINTKSSTANSSHSNATTSKSASSSSFLDYGYGQTDVTSSTSSANSSFSSINAVVSAADANAAAVAQQNPANLRRPRRYFECEMCSAVFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115171;
90% Identity: iTF_00384728;
80% Identity: -