Ochl001105.1
Basic Information
- Insect
- Ornithomya chloropus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963971445.1
- Location
- OZ020529.1:12329936-12333634[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6 4.4e+03 -1.7 0.0 34 43 203 212 202 212 0.87 2 2 2.8e-14 3.5e-11 43.4 0.1 3 44 647 688 645 690 0.95
Sequence Information
- Coding Sequence
- atgtcGAATTTGGGACCTAAAAAGGATGGTGGTCCGAATATTGAATTCTTTAATACATCAGAGTCATTACAAGGCTTTGAAACGATTCGATTATGGTTGcagaaaaattgcaaaaaatATCTGGCAAATAGTAGTGAACCAATAAGCAAGGAAAGCTTAGCCCAGTTAATTATTCAATTTCTTCAATATGTTGAAGCGAAATTGGGAAAGAACTCTATAGAGCCACCAGCGACTCGTATACCGATGCGTTGTTTCTTGGATTTTAAGCCCAGTGGAGGTTTATGCGTAATATTTTCGACCATGTTTCGCTTTCGTGCCGAGCAGAGGGGTAAAAAGTTTGACTTTTCTGTTGGAAAAAATCCTACCCGTAAGGATCCGAACATTCAATTACTTATCGATATTGAACAGGCGCTTGTGGAAGCTGATCTATATCGCattccttatatatatataagatcCGAAGTCGATAAACAATTGTCGACACGATTGCGTGAAATTTTGGCTACTAGACGGGTGGAAATTGTATCAGATGAAGAAGATGCTACACATATAATTTATCCTGTTGTGGATCCCCATCCAGATGAGTATGCACGACCGATTTTTAAGCGTGGTAACCATGTCATGTTGCATTGGTATTGTTTCCCGGAATCATATGACACTTGGATCGTTAATACATTCGGACTGCCGGATAATGTACCAGAAAATCCCGAATCTCCGCTTGAACGTTGGCGCGTATCAGCGTCATGGCTCTTAGACTTGGAGCAATATAACGAATGGATGGCTGAGGAGGATTATGAAGTAGATGAGTTAGGGAAGAAAAAAATGCACAAACAGTGTTTGTCTGTGGAGGATATTATGTCATTTGGTGTGGATGAAAAGAAAAAGTCGAGCAGTTCAAGTGCAGccaaacaaaaacgaaaaagatCACCATCCCCTTGTTCATCCAAGTCTGGTAAACGCAAGCGATCCCCGGCAGTTCTCCATAAAAAGTCTCGCAACGAGGACGATGACGAGGATCTCACCCGTGACATGGATGATCCACCATCGGAAACTAATCTGCAAGAAGTTATGAAGTCATCATCGTTACAATCCACAGCTAGCCCAGCTCCCGGTAATAAATCTCGCATTGATAGTGAAATGATGCCCATTAAAGGTGGCACTATAACTGATTTGGATGATGAAATGACGGGCGGTAGTGCTGCACAGGCCTTGTCCACGTGTGACGGTGAAAACTCACAAACTGGCAAAACAAGCGACAACAGCAATACCCAAGAATTCTCATCATCGGTTAAGGAGGATATGGAAGATAATGTGACCGAACAAACCCATCACATAATTGTTCCCTCCTACTCGGCCTGGTTTGATTACAATTCCATACACGTTATTGAAAAGCGCGCCATGCCCGAGTTCTTCAATTCGAAAAACAAATCCAAGACACCCGAAATTTATATGGCCTACCGTAATTTCATGATTGATACTTATCGCCTCAATCCAACCGAGTACTTGACTAGTACGGCTTGTCGTCGCAACTTGGCCGGCGATGTATGCGCCATTATGCGCGTACACGCCTTCCTGGAGCAGTGGGGTCTCATCAATTATCAAATTGATGCAGAACTGCGCCCTACTCCAATGGGTCCACCACCCACATCTCATTTCCATATCCTATCCGATACCCCGTCGGGTTTGCAATCATTAAATCCTCAAAAAACTCAACAGCCGTCAGCAGCGAAAAGTTTACTTGATTTGGATAAGAAGCCAATTGTTGCTGGTGCCATAAAAGAAAGTAAAGAGGATTCATTGGATAAAGCACCGCTCACTATCAAAACTGAGCCCATAGAAAATGGCTCAACTGCCTCGGGTCAGTTTGGTTTAAAGTTGGATCAGTATGCAAAGAAACCGGCAGCAATGAAAAATCGCACGGCAGCCAGCATGTCACGTGATTGGACTGATCAAGAAACTCTTCTGCTTCTGGAGGGCTTGGAATTATATAAGGACGATTGGAATAAAGTGTGCGAGCATGTAGGCACACGCACTCAAGATGAATgcattttacattttctacGCTTACCCATAGAAGATCCATACTTGGAGGATGATGGCGGCTTCCTTGGTCCTTTGGGCTGCCAACCAATACCTTTCAGTAAGTCTGGCAATCCCATAATGTCAACGGTTGCTTTTCTCGCCTCAGTAGTAGATCCGCGAGTGGCTGCCGCAGCAGCTAAAGCTGCCATGGAAGAATTTTCTGCAATAAAGGACGAGGTGCCGGCCACCATTATGGACAgtcatatgaaaaatgtcGAAAAAGCTTCCGCTGCCGGGAAATTTAATCCTACCTATGGATTGGCGAACAGCGGCATTGCCGGTACTGGAATAGATAAAGAAGATCCAAATGATCCAAATTCAATTAGCGCAGGTTCAGCGGAAGAGGATGGCATGAAAGATATATCTAAAAAGGATGATGTTGGCGGCCCCATAAATgtaaaagatataaaaaatgagGAAAACAATGTTGAGAGTGAGGGTGGTTCAAACACAAAGGACAACGATCCCGCCAAACAAGTCTTTAACGAAGCCAATGTACAAACCGCAGCCGCAGCTGCATTGGCCTCTGCTGCCGTTAAAGCTAAACACTTGGCTTCTCTGGAAGAACGTAAAATTAAGTCCTTGGTGGCGTTGCTAGTAGAGACTCAAATGAAAAAATTGGAAATCAAATTGCGTCACTTTGAAGAATTGGAAACTACAATGGAAAGAGAGCGAGAAGGTCTGGAATATCAACGGCAACAATTAATAACAGAACGTCAACAATTCCATTTGGAGCAGTTGAAAGCAGCTGAGTTTCGAGCTCGCCAGCAAGCTCATCATCGTTTACAGCAAGAGCAACAATGGCAAATAGCACCAGGTGCTCCcagtggtagtggtggtggtattaGTGGCAGTGGCGGTGCCGGTGCCGGTCCCTCTGGAGCTTTAGCTTCGGGTCATGCACTTAGTGGAAGCGGAATGGGGGTTGGTGGCTCTTCAGTTGGTGTTGTCAACATGCCCGGTGGAAATGGCGCTACATCTGCACCTTCTCAAGGGGCCGCATCAACTACAACAAACATTTCTCATACTCCTGGAGCACCAGGTGCCGTAAGTGCTCCATCATCTGGGCCAGCAGTAAATCCCATAGATACCAATGCGCCAGGCATGTCCCTACCATCATCTGATGGCCCTATCGGATCATCAGTTATTGGTCAAcaattaccacaaataaacGCTGCGGCGACAATTCCATCAGCTCACATTGCAGCAACTATCCAATCACCAAATGTTACCGTACCATCGGCTACCAACATCACTACTTCTTAA
- Protein Sequence
- MSNLGPKKDGGPNIEFFNTSESLQGFETIRLWLQKNCKKYLANSSEPISKESLAQLIIQFLQYVEAKLGKNSIEPPATRIPMRCFLDFKPSGGLCVIFSTMFRFRAEQRGKKFDFSVGKNPTRKDPNIQLLIDIEQALVEADLYRIPYIYIRSEVDKQLSTRLREILATRRVEIVSDEEDATHIIYPVVDPHPDEYARPIFKRGNHVMLHWYCFPESYDTWIVNTFGLPDNVPENPESPLERWRVSASWLLDLEQYNEWMAEEDYEVDELGKKKMHKQCLSVEDIMSFGVDEKKKSSSSSAAKQKRKRSPSPCSSKSGKRKRSPAVLHKKSRNEDDDEDLTRDMDDPPSETNLQEVMKSSSLQSTASPAPGNKSRIDSEMMPIKGGTITDLDDEMTGGSAAQALSTCDGENSQTGKTSDNSNTQEFSSSVKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKSLLDLDKKPIVAGAIKESKEDSLDKAPLTIKTEPIENGSTASGQFGLKLDQYAKKPAAMKNRTAASMSRDWTDQETLLLLEGLELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFSAIKDEVPATIMDSHMKNVEKASAAGKFNPTYGLANSGIAGTGIDKEDPNDPNSISAGSAEEDGMKDISKKDDVGGPINVKDIKNEENNVESEGGSNTKDNDPAKQVFNEANVQTAAAAALASAAVKAKHLASLEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQIAPGAPSGSGGGISGSGGAGAGPSGALASGHALSGSGMGVGGSSVGVVNMPGGNGATSAPSQGAASTTTNISHTPGAPGAVSAPSSGPAVNPIDTNAPGMSLPSSDGPIGSSVIGQQLPQINAAATIPSAHIAATIQSPNVTVPSATNITTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114946; iTF_00384510;
- 90% Identity
- iTF_01114946;
- 80% Identity
- -