Ochl000622.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ornithomya chloropus
Gene Symbol
dl
Assembly
GCA_963971445.1
Location
OZ020529.1:5994802-6001239[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-52 5.6e-49 166.7 0.2 1 168 8 177 8 178 0.99
2 2 4.1 1.4e+04 -3.8 0.1 149 169 534 554 531 554 0.83

Sequence Information

Coding Sequence
ATGGAGCAAACGAAACCTTATGTGAGGATCATAGAACAGCCAGCCAGCAAAGCATTAagattttcttcaaaaaatGATAAAGATTCCATTAGCACCATAGTAGGTGTACATTCTACAGCGGATAAGAAAACGTATCCAACAATTGAAGTGATTGGCTACAAGGGTGAAGCGGTTGTAGTAGTTTCATGCGTTACCGAGAATCAACCCTATCGTCCGCATCCCAACAACTTGGTCGGCAACAAGGGTTGTAAGAAAGGTGTTTgcacaataaaaatcaatccAGATACTATGCGTGCGGTATTCAGTGATTTGAGTGTTCAGTGCATTAATGAAGGTGACATTGATGCGGCTTTGGAGACTCGCGCTAAAGTCCGTGTGGATCCTTTTAAAACCGGCTTTTCTCACCGTTTACAGCCGCacaatattaatttaaatgcTGTTCGACTGTGCTTTCAAGTGATAATCGAGGGTAAGACGAAAGGATCTTTCACGCAAGCCCTGGAGCCAGTGGTGACAGAGCCCATTTACAATTTAGTGATATGTCGTTTGGGTAATTATGCCTCCAGCGCTATGGGTAACACGGAGGTTATATTGTTGTGCGGCAAGGTAGCTAAAGATGACATTTCCGTACGCTTCTACGAGGAGCAGAACGGTCAAATGGTTTGGGAGGCAATCGCCAACGCCAATATTTATAGCGAAACCGCCATCGTTTTAAAGACGCCCACCTATCACACATTAACTATAACGAAACCGGTTCAAGTTTTCATCCAATTGAAGCAGCCATCGGACGGTAGTACCAGTGTCCCATTATCTTTTCAATACCTGCCCCTGTCTATGGAAACGAAGAATTTCATTACCCAGCAAGTGTTGTTGACGCCGTATCATTGTTTTAGTCATTATCCAAGACACAAAACTGCCACCTTTTCACCCGACTCCAATTACTCTCAATTGAAGGCACAATGCGGTGCAGGAACTGGTAGCAAACGTGACATGTCTCACATGTCAGATCTGACTGTGCAACCACTGAACGAGAACAACTCAAAgacattaaacaatttaaatattgcCGCAAGCTTGCATGAATTGAAGCAACAGCGTAGTAATAATTTGTTGGAATCGGCAGTTGGCAGGGAAAAGCATTCCAATTGGGACAATCCAACACTCAAACGCACACCACTGGAAGAACAGAAACAACGAGAACTGTCACTCTCACCCATTACCACAGACACGCTTCAGGACACATCACATTATCATCCAGAATCATTTTGcaatattataaacataacCGCTGCTGCCGCTGCCGCtgccaacaccaacaccaccactaCCGCCACCACGACCAAAACATTAATAACAGCGAATACGACACATTCACAGAACGGCATGAACGCCAACAAGATCAAAAAACGCCTGGGCGGCAGTGGCAGTGGCAGCGGTAGCCGTTATAAAGTAACGGCTAGTTGTGTGCCGGAAGTAAATATAACATCAAGCAAAATCAGCCATGAAGCTTTGTCACTAAAGCCAACACAAgcacaaccaccaccaccgccaccgcTACCATCACTAGTAACATtctcatcatcattatcacatttggcatcatcatcaacaacaatgacaacaacaacgactGATGTAGTCACACAGTCAATAtattgtaacaacaacaacaataacaacaacaacaaatgtaaCAACACCGCAAATCAGAAAAGCGAGATAAATTGTAAAAGTAATACGCACACAAATGAACGATTCGCACTAGCgattaacaaaattattttctcaCCACCATTAGGAGCCACGCTAGTTGAAGAGGAGGATTTTAACGAACTAACCGCAGTACCAACTACCACCATTGTGATAGCCAACAATGTCAGAGGCGGTAGCAGTACGAAACTGATCCGCCAATTACCGCCCCCAAAACGGAACGGTAAAGCGAACGGTGTAGCCAAAAGACACGGTGGAGCTATAGCGGCAACATTGCGCAACGTATTGCAACGTCAGTCGGCCACAACGTTTAATGCTGCTTCGGGCAAGCAACCGGCCAATATAAGTGCTCCACCAAGTGAAGAGACTCAGGCCACTAACGAATTAACACCTTTAGTGGAACATCAGAGCAACAGTAGAGAGAATTTAGTCAAAACATCAGCATCGCCTTATGTAACAAACACCACTACGACTTATCAAGCGACAAACACAACTACTGCTGCAGCCGCAgcggctgctgctgctactgttGCCACCACTACCACCTATAGCCACAATTCCAAGACCACACGTTACTGGCCAGTTATTTATAGGAATCCTCATCACTACGATTACGAGGCTCTACACGCCCAATCACAAGCTGCAAACAATCTGATTCAGTCACCGTATGTGCCACCTGCCAGTTCTGCATCGTTTCGTCAAAACTGCTATTCGAATCAATTCCAACAATCGATTGTGTATTCCTCCAGCAATGAGGATCTAACCACTATAAATGAGTGCGTGGCTAACGGCGGGGACGAGGATAGtagcggtggtggtggtagtggtggcgGCAGCGCTGATGGTTTGTTTGATCCAAATGGTAgaggcagcagcagcagtggACGCAACAACCACCGTCAACAGCAGCAGACGACCTGTTATTATTTTGCATCCAGTCGTCACAACAGCATTTATGAACAACCCCCGACCATTTTGGGCAATAGCACTCTACATTTCGATCCTACAAACGCAGCCACCGTTGAGTCGTTGCgtcacaataacaacatactCTTGCGCAACAGCAGTTGCTCTTCAAAAATCATGCAACAAACCGCAACCAGTGGATGTAGTGGTACCGTAGATGTATCCAATTCAATAACGGCTATAAGTGGTGGAATTCAGGGCGACACCACAACATGCTGCGCAAATTGTTGCATGGGACCACCTCCCGTTCTCTTTCTATTCGTTACATTGCTTATGACCACAAGTGCAACGGCTATGTTATGTGCTGCCATAATGACTGATCACTGGGAACATGTAACTTGGGATCGTGAGAGTCTTGATAAATATACCAATCGTTCTGGTCTACGCTTGGATTGGATTATGGATGAAAAGATAGCCATGCTGAAGCCATATAAAAGAGTTGATTATCGCTTTCGGCGTGATACACTATTTCTGGTGCCGATGCATGGTGGTATTTGGACGTTGTGCATAGACTTGCCATTACGTGAACTGCAAGAGTTGAGGCGTCATCCGAAATTTCCGCCCAGTGCTCCAACATGTCTCAATTATTTGGCGGGATCATCGGAAAATGCACGAGGCGAAGAACAGCGTAACGATTGGCAACATAGTGAGTCACAGAGATCATTGCAACCTCATTTACGTACGTATATGGTACAATCTACGTGTGTTCTTAATCTTCTTTCTTTCAACCCTACAATCGAAGCTATCTAccttattaaataa
Protein Sequence
MEQTKPYVRIIEQPASKALRFSSKNDKDSISTIVGVHSTADKKTYPTIEVIGYKGEAVVVVSCVTENQPYRPHPNNLVGNKGCKKGVCTIKINPDTMRAVFSDLSVQCINEGDIDAALETRAKVRVDPFKTGFSHRLQPHNINLNAVRLCFQVIIEGKTKGSFTQALEPVVTEPIYNLVICRLGNYASSAMGNTEVILLCGKVAKDDISVRFYEEQNGQMVWEAIANANIYSETAIVLKTPTYHTLTITKPVQVFIQLKQPSDGSTSVPLSFQYLPLSMETKNFITQQVLLTPYHCFSHYPRHKTATFSPDSNYSQLKAQCGAGTGSKRDMSHMSDLTVQPLNENNSKTLNNLNIAASLHELKQQRSNNLLESAVGREKHSNWDNPTLKRTPLEEQKQRELSLSPITTDTLQDTSHYHPESFCNIINITAAAAAAANTNTTTTATTTKTLITANTTHSQNGMNANKIKKRLGGSGSGSGSRYKVTASCVPEVNITSSKISHEALSLKPTQAQPPPPPPLPSLVTFSSSLSHLASSSTTMTTTTTDVVTQSIYCNNNNNNNNNKCNNTANQKSEINCKSNTHTNERFALAINKIIFSPPLGATLVEEEDFNELTAVPTTTIVIANNVRGGSSTKLIRQLPPPKRNGKANGVAKRHGGAIAATLRNVLQRQSATTFNAASGKQPANISAPPSEETQATNELTPLVEHQSNSRENLVKTSASPYVTNTTTTYQATNTTTAAAAAAAAATVATTTTYSHNSKTTRYWPVIYRNPHHYDYEALHAQSQAANNLIQSPYVPPASSASFRQNCYSNQFQQSIVYSSSNEDLTTINECVANGGDEDSSGGGGSGGGSADGLFDPNGRGSSSSGRNNHRQQQQTTCYYFASSRHNSIYEQPPTILGNSTLHFDPTNAATVESLRHNNNILLRNSSCSSKIMQQTATSGCSGTVDVSNSITAISGGIQGDTTTCCANCCMGPPPVLFLFVTLLMTTSATAMLCAAIMTDHWEHVTWDRESLDKYTNRSGLRLDWIMDEKIAMLKPYKRVDYRFRRDTLFLVPMHGGIWTLCIDLPLRELQELRRHPKFPPSAPTCLNYLAGSSENARGEEQRNDWQHSESQRSLQPHLRTYMVQSTCVLNLLSFNPTIEAIYLIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00384347;
90% Identity
iTF_00384347;
80% Identity
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