Basic Information

Insect: Ormyrus thymus
Gene Symbol: -
Assembly: GCA_035582935.1
Location: JAWWEM010000027.1:18912586-18919255[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0042 0.56 11.7 0.5 1 21 162 182 162 185 0.89

2 28 0.47 64 5.2 2.0 1 23 194 217 194 217 0.96

3 28 0.0051 0.69 11.4 0.8 1 23 259 282 259 282 0.97

4 28 0.011 1.5 10.3 3.3 2 23 296 317 295 317 0.96

5 28 2.1e-06 0.00029 22.1 3.1 1 23 327 349 327 349 0.98

6 28 0.0025 0.33 12.4 0.0 1 23 355 377 355 377 0.96

7 28 0.0011 0.15 13.5 0.3 1 23 383 406 383 406 0.97

8 28 0.056 7.6 8.1 6.0 3 23 553 574 551 574 0.97

9 28 2.1e-05 0.0028 18.9 3.3 1 23 580 602 580 602 0.97

10 28 0.27 36 6.0 6.6 1 23 611 634 611 634 0.94

11 28 0.0015 0.2 13.1 3.1 1 23 640 662 640 662 0.96

12 28 0.00011 0.015 16.6 1.2 1 23 667 690 667 690 0.96

13 28 0.055 7.4 8.2 2.3 1 23 696 718 696 718 0.98

14 28 0.0022 0.3 12.5 4.4 1 23 722 745 722 745 0.96

15 28 0.0078 1.1 10.8 0.3 3 23 753 773 752 773 0.98

16 28 0.00017 0.023 16.0 1.3 1 23 779 802 779 802 0.95

17 28 0.00026 0.035 15.5 0.2 2 23 914 935 913 935 0.97

18 28 0.44 58 5.3 0.8 1 21 983 1003 983 1006 0.89

19 28 9.8 1.3e+03 1.1 4.8 1 23 1077 1100 1077 1100 0.95

20 28 0.042 5.6 8.6 6.9 1 23 1112 1134 1112 1134 0.99

21 28 0.0028 0.38 12.2 1.4 1 23 1153 1176 1153 1176 0.97

22 28 0.062 8.3 8.0 1.3 1 23 1192 1215 1192 1215 0.96

23 28 5.4e-05 0.0073 17.6 1.3 1 23 1221 1244 1221 1244 0.95

24 28 0.0015 0.2 13.1 0.7 3 23 1251 1272 1249 1272 0.93

25 28 0.0021 0.28 12.6 0.4 1 23 1277 1300 1277 1300 0.97

26 28 9.7e-08 1.3e-05 26.3 0.8 3 23 1308 1328 1307 1328 0.98

27 28 2.1e-05 0.0028 18.9 1.5 1 23 1334 1356 1334 1356 0.97

28 28 1.2e-06 0.00015 22.9 0.1 1 23 1362 1384 1362 1384 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0042	0.56	11.7	0.5	1	21	162	182	162	185	0.89
2	28	0.47	64	5.2	2.0	1	23	194	217	194	217	0.96
3	28	0.0051	0.69	11.4	0.8	1	23	259	282	259	282	0.97
4	28	0.011	1.5	10.3	3.3	2	23	296	317	295	317	0.96
5	28	2.1e-06	0.00029	22.1	3.1	1	23	327	349	327	349	0.98
6	28	0.0025	0.33	12.4	0.0	1	23	355	377	355	377	0.96
7	28	0.0011	0.15	13.5	0.3	1	23	383	406	383	406	0.97
8	28	0.056	7.6	8.1	6.0	3	23	553	574	551	574	0.97
9	28	2.1e-05	0.0028	18.9	3.3	1	23	580	602	580	602	0.97
10	28	0.27	36	6.0	6.6	1	23	611	634	611	634	0.94
11	28	0.0015	0.2	13.1	3.1	1	23	640	662	640	662	0.96
12	28	0.00011	0.015	16.6	1.2	1	23	667	690	667	690	0.96
13	28	0.055	7.4	8.2	2.3	1	23	696	718	696	718	0.98
14	28	0.0022	0.3	12.5	4.4	1	23	722	745	722	745	0.96
15	28	0.0078	1.1	10.8	0.3	3	23	753	773	752	773	0.98
16	28	0.00017	0.023	16.0	1.3	1	23	779	802	779	802	0.95
17	28	0.00026	0.035	15.5	0.2	2	23	914	935	913	935	0.97
18	28	0.44	58	5.3	0.8	1	21	983	1003	983	1006	0.89
19	28	9.8	1.3e+03	1.1	4.8	1	23	1077	1100	1077	1100	0.95
20	28	0.042	5.6	8.6	6.9	1	23	1112	1134	1112	1134	0.99
21	28	0.0028	0.38	12.2	1.4	1	23	1153	1176	1153	1176	0.97
22	28	0.062	8.3	8.0	1.3	1	23	1192	1215	1192	1215	0.96
23	28	5.4e-05	0.0073	17.6	1.3	1	23	1221	1244	1221	1244	0.95
24	28	0.0015	0.2	13.1	0.7	3	23	1251	1272	1249	1272	0.93
25	28	0.0021	0.28	12.6	0.4	1	23	1277	1300	1277	1300	0.97
26	28	9.7e-08	1.3e-05	26.3	0.8	3	23	1308	1328	1307	1328	0.98
27	28	2.1e-05	0.0028	18.9	1.5	1	23	1334	1356	1334	1356	0.97
28	28	1.2e-06	0.00015	22.9	0.1	1	23	1362	1384	1362	1384	0.98

Sequence Information

Coding Sequence: ATGCAAGATTGCAAGAGCAATTCGGCATCAGCAAGAATAGACGTCCACGCTGAGTCGTCTGCTACAGTCGCGAAGACAAgccgagaaagaaaagaagaaccTATATCGTCTCCTGTTTTCCtcggaaaaattaattccagGGAACCATTGGCATCCACCGACCTCACGGCGGACGACGACGCCAACAAGGAATCGCCAAACCCTTGTAAGTCTCCCGCAAAGAAACGTTCAGCCGAATCTCCCGAAACTCCCACTACCTTCAAAAGGTACTTCCTCCGTGACCCGACAAACGATAAGCCCGATAGCGGTGACGAGTCCGACGAAGACAAGGAAGACCTGATATCAAAGCTCTGCGTCTACAAGCAGCTATCGGACGGCACTTATTCCTGCGAGCTGTGCAACGCAAAGGGCGTGAAAGTGATCACGGAACAAAAGACGCCGATTGTACGTCATCTCCTAAGGGCGCACACCTACCACCATGGCTTCGAGTGCTCCAACTGTACGGAAACGTTCAGAAAAGAGAATTGGCTGAAGAACCACAATGTTATAGCACATCCGGAGCAGGACAGCAGCAAGTTCTTCCAGTGTGCCAGGTGCAAGCATAAGAGCAAGGACGAGGAGCTGCTCAGGCTTCACGCGCTGAGGAGGCATGCGGCATTGTTCAGATACGCGTGCAAGTGCTGCGCCAAATGCTTCAAGACCTGGAAAGCCAAGTATGAGCACGAGAGATTCATGGAGAGGGGAAAGAAGAAGTTTAACAGACCCAAGCCGAGGTATGTCTGCAATAAATGCAGCGTTATCTCCAAGACCAAGGCTGAATTCGTGAAGCATCTCAAGAGCACTCACTCTGTagacttttacaaaaatGGTCCAAGAATACTCTGTAACTGCAAGCAATGCAACAAAGTCTTCCTCTCGCGCAAGCTGCTCCGCGAGCACTTGGCCACACACGAGATCATAGAAAACGACGAGACGGACTACAGTTGCAAAGAATGCGGCAAACGGCTCTCCAGCAAAGACCACTTGAAAAAGCACGAGCGCGTGCATACCGGCGAGCGGCCCTATGCCTGTCCCGAATGTGGCCAGGCCTTTGCGCTGCGCACGACAATGAGGATCCACGCGCTTTCTCATCGCGGCATCAAACCCTACGTTTGCAGGCTCTGCAATCTTGGCTACTCGCAGAGGTCCGCGCTGATGATCCACTGGAAGAGCAAACACAAAAATCTACCGCCCCCTCCGCCCATCGAGATACACCAGTTCTTCGATGCCAAGGGCAGACTCGTCATTCCTTGTAAgaaaaatacGCGCTGGTCGAGAAAACAGAGTATCATCTCTCGAATAAGAGTACGAACATCTTTGGAATTGACAGACTCGAATTCACTTGAAGAGACAGTCAGCAAATCGACCATTAACAATATGCCGAAAAAATCTGCAACACTAATTtccaaaaggaaaaaatcagttccttcgaaaatttttcaggatgATAATGTTATTGAGCAAGGAGAAAAGGTCTCAGTCATTGAACATTCTTCGAAAATTGCAAGGTTGGAATGTGCACCTTCTATTTCGCAAGCACAAGAAAATCCTGCAAAAGTCAAGAAAGAACCCACTGAGCCTCTGCtctataaaaaacttaaagctGGTGGCTTTGGCTGTAAAGTCTGTCATCAAAAATACACTCATCGTTACAAAGTCAAGCAGCACATCAAAATGAAGCACGCACCAAGAGAAGTCTTCAAGTGTTCTGATTGCTCTAAAACCTTTAAATCTAAGTATCAATTTAATGTACATGCAAACCAACATCGTGAAAATTGCAATGATTATTTGTTCTGTTGCGATAAGTGTGACTACCGAGCGAAGTCGAAACATTATCTAAAGACCCACGAAATAAGAAAACATACAAACGAGTATAATTTCGAGTGCGATCATTGTGGAAAGCGTTTCAAAATGAAGATGGATCTAAAATTTCATCTGGGTACTCATGGAACCTCGCAGCATATGTGCGATGCTTGCGGTCGTATGTATACAAGTCAAGACTCACTCTACAAGCATCGTCGAGTGGTTCACTTAAATGATTACAAGTTCCAATGCGAAATCTGCCATCAGAAACTGCTTACGCAAGAAACGTTCAACAGCCACATGGAGTCACACAAAAACCTTCACAGCTGCGATGAATGCGATCTcaaatttacgaaaaagtaTTACGTCACGAGGCACAAGAAGCGTGTGCACAAAGTGGAAAAGACAAAGCTCTGCCCGGTTTGCGGCAAAGCGTTCGTGTGCATGGCTACTCTGAGGGTACACTACCTTACACATGCAAAAGTAAAGCCGTATCTGTGCAACGTCTGTGGCTTCAGCTTCACCCAACGATCCTCGATGATGTTACATTGGAAAAGGAAACATCCCGACGCCGAGGATCCACCTCCGCCAGTGatacttacaaattttttcgatgCCATACAATCCGAAGTCAACAAAATGGCGGAGAACCGTAACGAGTACAATAATGCTTCCAACGAGACTCATCAGTACATTGTTCCGGATTCGGACATCGAGTGCACGATCGACAGCAGCGGTAAAACTGTCAAGACTATCGTCACGTCGAAACAACCAGCATCTTCAATGAGACTATATCAGATTTCCTTCGTCAATGGCAAGACTTCGTACTCATTGTTACCTATCAAACAGAAGGTCCCAAAGTCTACGCCGGCAGTTCATCAAAACGAGGAAAGTTTGACTTGCGAGGAATGTGGTTTAAAGTTCGCTACAGAGGTTCGTCTTAAATGGCACCAATCGACCCACAATCCGCTCAAGAATTGTAAGAATTTTAGAAGACAAGCTAAGATTATGAAGCAGCAGGATGATCCGCTGGGAAAGAAggtggaaaaaaaagttaccgaCAAATGCGAAGAGCAGTTGAAAGAGGTGAAGAAAAATCTGATCTACATCTGTCCCTCTTGCGATTTCAGAACTACCAATCGCAATACGATGATCACTCATTTCACCGGTACGCATTACTTCAAAGCTAAGGATCAGTCTCACGACGCGGAAGAAACAGAGCAGCTCTTGCAGCAACCAAAAATGGAAGTCGAGGAAGAGAATCACGAAATCGTCGAAGAAAAAGTAGAAACGCTAGAGATAACCTGTGCCCAATGTGGATTTTCGAGCTTCAATCAGGACGATATCGACTTCCACACGTGTCACGATCCGGAGCAGTCGCAAATGTTCTCTTGCCATTTATGCACTTACGAGTGTCTAACTCGCATGGGATTGCAGAGCCATATTACCCGCAAACACAAGCCCAAAGCCGAAACTGGACAGCCTAGGGTCTTCCAATGCGACTTCTGCGAGTTTAAATGCTCAAACAAGAACACGTTGTACTCGCACAGACGTAAACATCGCAGGGATGACGATAAACCGGTGACAGAAGGTGAGGCTGAGCTCGATTGTAGCTATTTTTGCAACGAGTGCGATTTTTCCACGAAGAAGAAAGGAGCCCTTTATTTGCACATTCAAAGGCGGCATAAAAGTGCGGAGGAGAAGCAGCAAGTACCTTCTCGGCCAGAATACTATAGTTGTGATCAGTGCGATTATACCAATAAGAATAAGTACGAGATGAAGGTGCACGTAATTAGAAAGCACACGAACGAGTACAATCACGAATGCGAGATCTGCggtaaaaagtacaagatCCGTGGCGATCTTACGAATCACATCAGGTTCCAGCACAGGGAACAGCCGATCATCTGCGACGTTTGCGGCAAAACCTGCGGCAACAGCAATTCGCTTTACGTACACCAAAAGTTCGCTCACTACAAGGCTGAATTCGAGTGTCCAATCTGCCATCGGCGAATGGTCAGTCAGGCCAACCTGGATGACCATATCCTAAAGCAGCACGAACAACGAGAGGACGCCATCTGCGAGGAGTGCGGCAAGACCTTCACGAGGCAAAGTCGACTGAAGATTCACATGAGAATTCACACAGGTGTTAAACCGCACAGCTGTAAAATCTGCGCAAAGGCTTTCACCAGAAAGACGGCTCTCAGGCAACATCTGCTCATTCACACAGGTCAGAGACCCTACGTATGCGACATATGTGGAAAAGCCTTCACTCAGAAACCAGGACTGATCAGCCACAGGAAAAGCCATCCAGGCTCGCACCCACCTTTGCCAAGGGTTACGATCGATCACGTGCTCTCAGAACTGCTTACAGAGGAGAGTTGA
Protein Sequence: MQDCKSNSASARIDVHAESSATVAKTSRERKEEPISSPVFLGKINSREPLASTDLTADDDANKESPNPCKSPAKKRSAESPETPTTFKRYFLRDPTNDKPDSGDESDEDKEDLISKLCVYKQLSDGTYSCELCNAKGVKVITEQKTPIVRHLLRAHTYHHGFECSNCTETFRKENWLKNHNVIAHPEQDSSKFFQCARCKHKSKDEELLRLHALRRHAALFRYACKCCAKCFKTWKAKYEHERFMERGKKKFNRPKPRYVCNKCSVISKTKAEFVKHLKSTHSVDFYKNGPRILCNCKQCNKVFLSRKLLREHLATHEIIENDETDYSCKECGKRLSSKDHLKKHERVHTGERPYACPECGQAFALRTTMRIHALSHRGIKPYVCRLCNLGYSQRSALMIHWKSKHKNLPPPPPIEIHQFFDAKGRLVIPCKKNTRWSRKQSIISRIRVRTSLELTDSNSLEETVSKSTINNMPKKSATLISKRKKSVPSKIFQDDNVIEQGEKVSVIEHSSKIARLECAPSISQAQENPAKVKKEPTEPLLYKKLKAGGFGCKVCHQKYTHRYKVKQHIKMKHAPREVFKCSDCSKTFKSKYQFNVHANQHRENCNDYLFCCDKCDYRAKSKHYLKTHEIRKHTNEYNFECDHCGKRFKMKMDLKFHLGTHGTSQHMCDACGRMYTSQDSLYKHRRVVHLNDYKFQCEICHQKLLTQETFNSHMESHKNLHSCDECDLKFTKKYYVTRHKKRVHKVEKTKLCPVCGKAFVCMATLRVHYLTHAKVKPYLCNVCGFSFTQRSSMMLHWKRKHPDAEDPPPPVILTNFFDAIQSEVNKMAENRNEYNNASNETHQYIVPDSDIECTIDSSGKTVKTIVTSKQPASSMRLYQISFVNGKTSYSLLPIKQKVPKSTPAVHQNEESLTCEECGLKFATEVRLKWHQSTHNPLKNCKNFRRQAKIMKQQDDPLGKKVEKKVTDKCEEQLKEVKKNLIYICPSCDFRTTNRNTMITHFTGTHYFKAKDQSHDAEETEQLLQQPKMEVEEENHEIVEEKVETLEITCAQCGFSSFNQDDIDFHTCHDPEQSQMFSCHLCTYECLTRMGLQSHITRKHKPKAETGQPRVFQCDFCEFKCSNKNTLYSHRRKHRRDDDKPVTEGEAELDCSYFCNECDFSTKKKGALYLHIQRRHKSAEEKQQVPSRPEYYSCDQCDYTNKNKYEMKVHVIRKHTNEYNHECEICGKKYKIRGDLTNHIRFQHREQPIICDVCGKTCGNSNSLYVHQKFAHYKAEFECPICHRRMVSQANLDDHILKQHEQREDAICEECGKTFTRQSRLKIHMRIHTGVKPHSCKICAKAFTRKTALRQHLLIHTGQRPYVCDICGKAFTQKPGLISHRKSHPGSHPPLPRVTIDHVLSELLTEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01112028;
90% Identity: iTF_01111199;
80% Identity: -