Basic Information

Insect: Ormyrus nitidulus
Gene Symbol: -
Assembly: GCA_900474335.1
Location: UCOL01000025.1:60794-68509[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.014 1.9 9.9 0.2 1 23 117 140 117 140 0.93

2 28 0.56 73 4.9 1.6 1 23 149 172 149 172 0.95

3 28 0.0044 0.58 11.5 0.8 1 23 214 237 214 237 0.97

4 28 0.0098 1.3 10.4 3.3 2 23 251 272 250 272 0.96

5 28 2.4e-06 0.00032 21.7 2.8 1 23 282 304 282 304 0.98

6 28 0.017 2.2 9.7 0.0 1 20 310 329 310 331 0.91

7 28 0.00094 0.12 13.6 0.3 1 23 338 361 338 361 0.97

8 28 0.049 6.4 8.2 6.0 3 23 508 529 506 529 0.97

9 28 1.8e-05 0.0023 19.0 3.3 1 23 535 557 535 557 0.97

10 28 0.23 30 6.1 6.6 1 23 566 589 566 589 0.94

11 28 0.0013 0.17 13.2 3.1 1 23 595 617 595 617 0.96

12 28 9.9e-05 0.013 16.7 1.2 1 23 622 645 622 645 0.96

13 28 0.048 6.3 8.2 2.3 1 23 651 673 651 673 0.98

14 28 0.0019 0.25 12.6 4.4 1 23 677 700 677 700 0.96

15 28 0.0068 0.89 10.9 0.3 3 23 708 728 707 728 0.98

16 28 0.00015 0.02 16.1 1.3 1 23 734 757 734 757 0.95

17 28 0.00023 0.03 15.5 0.2 2 23 869 890 868 890 0.97

18 28 0.089 12 7.4 0.7 1 21 938 958 938 961 0.89

19 28 8.4 1.1e+03 1.1 4.8 1 23 1031 1054 1031 1054 0.95

20 28 0.036 4.7 8.6 6.9 1 23 1066 1088 1066 1088 0.99

21 28 0.0025 0.32 12.3 1.4 1 23 1107 1130 1107 1130 0.97

22 28 0.053 7 8.1 1.3 1 23 1146 1169 1146 1169 0.96

23 28 4.7e-05 0.0061 17.7 1.3 1 23 1175 1198 1175 1198 0.95

24 28 0.0013 0.17 13.2 0.7 3 23 1205 1226 1203 1226 0.93

25 28 0.0018 0.23 12.7 0.4 1 23 1231 1254 1231 1254 0.97

26 28 6.3e-08 8.2e-06 26.7 0.8 2 23 1261 1282 1261 1282 0.97

27 28 1.8e-05 0.0024 19.0 1.5 1 23 1288 1310 1288 1310 0.97

28 28 1e-06 0.00013 22.9 0.1 1 23 1316 1338 1316 1338 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.014	1.9	9.9	0.2	1	23	117	140	117	140	0.93
2	28	0.56	73	4.9	1.6	1	23	149	172	149	172	0.95
3	28	0.0044	0.58	11.5	0.8	1	23	214	237	214	237	0.97
4	28	0.0098	1.3	10.4	3.3	2	23	251	272	250	272	0.96
5	28	2.4e-06	0.00032	21.7	2.8	1	23	282	304	282	304	0.98
6	28	0.017	2.2	9.7	0.0	1	20	310	329	310	331	0.91
7	28	0.00094	0.12	13.6	0.3	1	23	338	361	338	361	0.97
8	28	0.049	6.4	8.2	6.0	3	23	508	529	506	529	0.97
9	28	1.8e-05	0.0023	19.0	3.3	1	23	535	557	535	557	0.97
10	28	0.23	30	6.1	6.6	1	23	566	589	566	589	0.94
11	28	0.0013	0.17	13.2	3.1	1	23	595	617	595	617	0.96
12	28	9.9e-05	0.013	16.7	1.2	1	23	622	645	622	645	0.96
13	28	0.048	6.3	8.2	2.3	1	23	651	673	651	673	0.98
14	28	0.0019	0.25	12.6	4.4	1	23	677	700	677	700	0.96
15	28	0.0068	0.89	10.9	0.3	3	23	708	728	707	728	0.98
16	28	0.00015	0.02	16.1	1.3	1	23	734	757	734	757	0.95
17	28	0.00023	0.03	15.5	0.2	2	23	869	890	868	890	0.97
18	28	0.089	12	7.4	0.7	1	21	938	958	938	961	0.89
19	28	8.4	1.1e+03	1.1	4.8	1	23	1031	1054	1031	1054	0.95
20	28	0.036	4.7	8.6	6.9	1	23	1066	1088	1066	1088	0.99
21	28	0.0025	0.32	12.3	1.4	1	23	1107	1130	1107	1130	0.97
22	28	0.053	7	8.1	1.3	1	23	1146	1169	1146	1169	0.96
23	28	4.7e-05	0.0061	17.7	1.3	1	23	1175	1198	1175	1198	0.95
24	28	0.0013	0.17	13.2	0.7	3	23	1205	1226	1203	1226	0.93
25	28	0.0018	0.23	12.7	0.4	1	23	1231	1254	1231	1254	0.97
26	28	6.3e-08	8.2e-06	26.7	0.8	2	23	1261	1282	1261	1282	0.97
27	28	1.8e-05	0.0024	19.0	1.5	1	23	1288	1310	1288	1310	0.97
28	28	1e-06	0.00013	22.9	0.1	1	23	1316	1338	1316	1338	0.98

Sequence Information

Coding Sequence: ATGAAGGAACCGTTGGCATCCATCGACCTCACAGCGGAGGACGACGCCAACAAGGAATCGGCAAACCGTTGTAAGTCTCCCGCGAAGAAACGTTCAACCGAATCTCCCGAAACTCGCACTACCTTTAGAAAGTACTTCCTCCGCGACGCGACAAACGATAAGCCCGATAGCGGTGACGAGTCCGACGAAGACAAGGAGGACCTGATATCAAAGCTCTGCGTCTACAAGCAACTATCAGACGGCAGTTACTCCTGCGAGCTCTGCAACGCAAAGGGCGTGAAAGTGATCACAGAACAAAAGACGCCGATTGTACGTCATCTCCTAAGGGCGCACACTTACCACCATGGCTACGAGTGCTCCAACTGTCCGGACACGTTTAGAAAAGAGAACTGGCTTAAGAACCACACTGTCATAGCGCATCCGGAGCAGGACAGCAGCAAGTTTTTCGAGTGTGCCAGATGCAAGCATAAGAGCAAGGACGAGGAGCTGCTCAGGCTTCACGCGTTGAGGAGGCATGCGGCATTGTTCAGGTACGCGTGCAAGTGCTGCGCCAAATGCTTCAAGACCTGGAAAGCCAAATACGAGCACGAGAGATTCATGGAGAGGGGAAAGAAGAAGTCTAACAGACCCAAGCCGAGGTATGTCTGCAATAAGTGCAGCGTTATCTCCAAGACCAAAGCTGAATTCGTGAAGCATCTCAAGAGTACTCACTCTGTagacttttacaaaaatGGTCCAAGAATACTCTGTAACTGCAAGCAATGCAACAAAGTCTTCCTCTCGCGCAAGCTGCTCCGCGAGCACTTGGCTACACACGAGATCATAGAAAACGACGAGACGGGCTACAGTTGCAAAGAATGCGGCAAACGGCTCTCCAGCAAAGATCACTTGAAAAAGCACGGACGCGTGCATACCGGCGAGCGGCCCTACGCCTGTCCTGAGTGTGGTCAGGCCTTTGCTCTGCGCACGACAATGAGGATCCACGCGCTTTCTAATCGCGGCATCAAACACTACGTTTGCAGGCTCTGCAATCTCGGCTACTCGCAGAGGTCCGCGCTGATGATCCACTGGAAAAGCAAACATAAAAATCTACCGCCCCCTCCGCCGATCGAGATACACCAGTTCTTCGATGCCAAGGGCAGACTCGTCATTCCTTGTAAGAAAAATACGCGCTGGTCGAGAAAACAGAGTATCATCTCTCGAATAAGAGTACGAACATCTTTGGAATTGACAGACTCGAATTCATTTGAAGAAACAGTCAGCAAATCGACCGTTAAAAATATGCCGAAAAAATCTGCAACATTAATTtccaaaaggaaaaaatcagTTCCTTCGAAAATTTTCCAGGATGATACTGTTATTGAGCAAGGAGAAAAGGTCTCAGTCATTGAACATTCTTCGAAAATTGCAAGGTTGGAATGTGCACCTTCTATTTCGCAAGCACAAGGAAATTCTGCGAAAGTCAAGAAAGAACCCACTGAGCCTCTGCtctataaaaaacttaaagctGGTGGTTTTGGCTGTAAAGTCTGTCATCAAAAATATACTCATCGTTACAAAGTCAAGCAGCACATCAAAATGAAACACGCACCAAGAGAAGTCTTTAAGTGTTCTGATTGCTCTAAAACCTTTAAATCTAAGTATCAATTTAATGTACATGCAAACCAACATCGTGAAAACTGCAACGATTATTTGTTCTGTTGCGATAAGTGTGACTACCGAGCGAAGTCGAAACATTATCTAAAGACCCACGAAATAAGAAAACATACAAACGAGTATAATTTCGAGTGTGATCATTGTGGAAAGCGTTTCAAAATGAAGATGGATCTAAAATTTCATCTGGGTACTCATGGAACGTCGCAGCATATGTGCGATGCTTGCGGTCGTATGTATACAAGTCAAGACTCACTCTACAAGCATCGTCGAGTGGTTCACTTAAATGATTACAAATTCCAATGCGAAATCTGCCATCAGAAACTGCTTACGCAAGAAACGTTCAACAGTCACATGGAGTCACACAAAAACCTTCACAGCTGCGATGAATGCGATCTCAAATTCACGAAAAAGTATTACGTCACGAGGCACAAGAAGCGTGTGCACAAAGTGGAAAAGACAAAGCTCTGTCCGGTTTGCGGCAAAGCGTTCGTGTGCATGGCCACTCTGAGGGTACACTACCTCACACACGCAAAAGTCAAACCGTATCTGTGCAACGTCTGTGGCTTTAGCTTCACCCAACGATCCTCGATGATGTTGCATTGGAAAAGGAAACATCCCGACGCCGAGGATCCACCTCCACCGGTGatacttacaaattttttcgatgCCATACAATCCGAAGTCAACAAAATGGTGGAGAACCGTAACGAGTACAATAATACTTCCAACGAGACTCATCAGTACATTGTTCCGGATTCGGACATCGAGTGCACGATCGACAGCAGCGGTAAAACTGTCAAGACTATCGTCACGCCGAAACAACCAGCATCATCAATGAGACTATATCAGATTTCCTATGTCAATGGCAAGACTTCGTACTCATTGTTACCTATCAAACAGAAGGTCACAAAATCTGCGCCGGAAGTTCATCTAAACGAGCAAAGTTTGACCTGCGAAGAATGTGGTTTAAAGTTCGCCACAGAGGTTCGTCTTAAATGGCACCAATCGACCCACAATCCGCTCAAGAATTGTAAGAATTCTAGAAGACAAGCTAAGATTATGAAGCAGCAGGATGATCCACTGGGGGAGacggtggaaaaaaaagttaccgACAAATGCGAAGAGCAGTTGAAAGAGGGGAAGAAAAATCTTATCTACATCTGTCCATCTTGCGATTTCAGAACTACCAATCGCAGTACGATGATCAGTCATTTCACTGGTACGCATTACTTCAAAGCTAAGGATCAGCCTCACGATGCGGAAGAAGCGGAGCTGCTTCAGCAACCAAAAATGGAAATCGATGAAGAGAATCATGAAATCGTCGAAGAAAAGGTAGAAACCCTAGAGATAACATGTGCCCAATGTGGGTTTTCGAGCTTCAATCAGGACGATATCGACTTCCATACGTGTCACGATCCGGAACAGTCGCAAATGTTCTCTTGCCATTTATGCACTTACGAGTGTCTAACTCGCATGGGATTGCAGAGCCATATTACCCGCAAACACAAGCCCAAAGCCGAAACTGGACAGCCGAGGGTCTTCCAATGCGACTTCTGCGAATTTAAGTGCTCAAACAAGAACACGTTGTACTCGCACAGACGTAAACATCGCAGGGATGACGATAAACCGGTGACAGAAGGTGAGGCTGAGCTCGATTGTAGCTATTTTTGCAACGAGTGTGATTTTTCCACGAAGAAGAAAGGAGCTCTTTATTTGCACATTCAAAGGCGGCATAAAAGTGCGGAGGAGAAGCAGCAAGTACCTTCTCGGCCAGAATACTACAGTTGCGATCAGTGCGATTataccaataaaaataagtacgAGATGAAGGTACACGTAATTAGGAAGCACACGAACGAGTACAATCACGAATGCGAAATCTGCGGTAAAAAGTACAAGATCCGTGGCGATCTTACGAATCACATCAGGTTCCAGCACAGGGAGCAGCCGATCATCTGCGACGTTTGCGGTAAAACCTGCGGCAACAGCAACTCACTTTACGTACACCAAAAGTTCGCTCACTACAAGGCTGAATTCGAGTGTCCAATCTGTCATCGGCGAATGGTCAGTCAGGCCAACCTGGATGAGCATATCTTAAAGCAGCACGAACAACGAGAGGACGCTGTCTGCGAGGAGTGCGGCAAGACCTTTACGAGGCAAAGTCGACTGAAGATTCACATGAGAATTCATACAGGTGTTAAACCGCACAGCTGTAAAATCTGCGCAAAGGCTTTCACCAGAAAGACGGCTCTCAGGCAGCATCTGCTCATTCACACAGGTCAGAGACCCTACGTATGCGATATATGTGGAAAAGCCTTCACTCAGAAACCAGGACTGATCAGCCATAGAAAAAGCCATCCAGGCTCGCATCCACCTTTGCCAAGGGTTACGATCGATCATGTGCTCTCAGAACTGCTTACGGAGGAGAGTTGA
Protein Sequence: MKEPLASIDLTAEDDANKESANRCKSPAKKRSTESPETRTTFRKYFLRDATNDKPDSGDESDEDKEDLISKLCVYKQLSDGSYSCELCNAKGVKVITEQKTPIVRHLLRAHTYHHGYECSNCPDTFRKENWLKNHTVIAHPEQDSSKFFECARCKHKSKDEELLRLHALRRHAALFRYACKCCAKCFKTWKAKYEHERFMERGKKKSNRPKPRYVCNKCSVISKTKAEFVKHLKSTHSVDFYKNGPRILCNCKQCNKVFLSRKLLREHLATHEIIENDETGYSCKECGKRLSSKDHLKKHGRVHTGERPYACPECGQAFALRTTMRIHALSNRGIKHYVCRLCNLGYSQRSALMIHWKSKHKNLPPPPPIEIHQFFDAKGRLVIPCKKNTRWSRKQSIISRIRVRTSLELTDSNSFEETVSKSTVKNMPKKSATLISKRKKSVPSKIFQDDTVIEQGEKVSVIEHSSKIARLECAPSISQAQGNSAKVKKEPTEPLLYKKLKAGGFGCKVCHQKYTHRYKVKQHIKMKHAPREVFKCSDCSKTFKSKYQFNVHANQHRENCNDYLFCCDKCDYRAKSKHYLKTHEIRKHTNEYNFECDHCGKRFKMKMDLKFHLGTHGTSQHMCDACGRMYTSQDSLYKHRRVVHLNDYKFQCEICHQKLLTQETFNSHMESHKNLHSCDECDLKFTKKYYVTRHKKRVHKVEKTKLCPVCGKAFVCMATLRVHYLTHAKVKPYLCNVCGFSFTQRSSMMLHWKRKHPDAEDPPPPVILTNFFDAIQSEVNKMVENRNEYNNTSNETHQYIVPDSDIECTIDSSGKTVKTIVTPKQPASSMRLYQISYVNGKTSYSLLPIKQKVTKSAPEVHLNEQSLTCEECGLKFATEVRLKWHQSTHNPLKNCKNSRRQAKIMKQQDDPLGETVEKKVTDKCEEQLKEGKKNLIYICPSCDFRTTNRSTMISHFTGTHYFKAKDQPHDAEEAELLQQPKMEIDEENHEIVEEKVETLEITCAQCGFSSFNQDDIDFHTCHDPEQSQMFSCHLCTYECLTRMGLQSHITRKHKPKAETGQPRVFQCDFCEFKCSNKNTLYSHRRKHRRDDDKPVTEGEAELDCSYFCNECDFSTKKKGALYLHIQRRHKSAEEKQQVPSRPEYYSCDQCDYTNKNKYEMKVHVIRKHTNEYNHECEICGKKYKIRGDLTNHIRFQHREQPIICDVCGKTCGNSNSLYVHQKFAHYKAEFECPICHRRMVSQANLDEHILKQHEQREDAVCEECGKTFTRQSRLKIHMRIHTGVKPHSCKICAKAFTRKTALRQHLLIHTGQRPYVCDICGKAFTQKPGLISHRKSHPGSHPPLPRVTIDHVLSELLTEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01112028;
90% Identity: iTF_01112028; iTF_01113635; iTF_01112858;
80% Identity: -