Oros001338.1
Basic Information
- Insect
- Ormyrus rosae
- Gene Symbol
- tfip11
- Assembly
- GCA_035047165.1
- Location
- JAWWML010000001.1:18850721-18852263[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-60 2.3e-56 192.3 21.5 37 275 2 233 1 233 0.95 2 2 0.00026 2.8 8.3 0.8 241 270 244 273 234 278 0.83
Sequence Information
- Coding Sequence
- atgAAGGAAAGTCTAGTAAATTGGGATCCATTACAAGAACCAAATTTTCCATTAGCTTCATTCAAAGAATGGAAACACATTCTGGAATATGGTCAACAAAATGTTGAATTTGAATCAAAGAGTTTTTATGATCAACTTGTATCAAATACTTGGTTACCAGTTGTCCGTGCTTCTATAAAAAATTGGGATTGTAGACAACCAGATAGCCTTATTAATTTAGTAAGAAGTTGGTTATTGATAATTCCTTCTTGGATGAAGGATAATATAGTCAGCAtgataattcatcaaaaattagTCATTGCTGTGGAAAATTGGAATCCTAATAGTAGTGACTTAATTCACAATTGGATTGACCCTTGGTTAACTGTAATGAgaGTTGAAATGGATACATTAATATGTCCAataattagaagaaaattatctTATGCTTTTGATGCATGGCATCCATCTGATTCATCTCTTAGAATAATGTTCAAAAACTgctcaaaaatattatctcaCTGTGATATAAATGACTTTCTAGTCAGATTTGTTGTACCAAAATTACAAATGGTTTTATCTAAATTAGTTATCAATCCACATCAGCAAAATTTAGAACAATGGGATTGGGTGATGAATGAATGGCAAGAGTTGATTCCTGTTAATATAATGGCAGCAacgctaaataaatttttttttcctaaatgGCTGCATGTTTTAGCACTTTGGTTAaatcattcaaataattatgaGCAAATGATTAATTGGTATAAGGCCTGGAAAGGAATGCTAAGTAAAAATCTACTTgcagaattaataattaaagAAAATTTGAACAAAGGTTTGGATATGATGAGCAGAACAATTAACATTCCACAATGCGTTGAAACGCACGTAATCGATCgagtattatatttaataactttagaGCGCGAACAATTGCTAACATCAAAAATTATCCACCCGAAGAAGGAAgTATCAACGGAGataaatacttcaaaattagttttagGTAGTTTTAAGGATTTAGTCCAAAGGAAATGTGAACaaaaagacGTATTATTTGTTTCTTGCAATGAAAAGTGGTCACCAACAAGACTAAAATCGTTACTGAAAAAGATCTAA
- Protein Sequence
- MKESLVNWDPLQEPNFPLASFKEWKHILEYGQQNVEFESKSFYDQLVSNTWLPVVRASIKNWDCRQPDSLINLVRSWLLIIPSWMKDNIVSMIIHQKLVIAVENWNPNSSDLIHNWIDPWLTVMRVEMDTLICPIIRRKLSYAFDAWHPSDSSLRIMFKNCSKILSHCDINDFLVRFVVPKLQMVLSKLVINPHQQNLEQWDWVMNEWQELIPVNIMAATLNKFFFPKWLHVLALWLNHSNNYEQMINWYKAWKGMLSKNLLAELIIKENLNKGLDMMSRTINIPQCVETHVIDRVLYLITLEREQLLTSKIIHPKKEVSTEINTSKLVLGSFKDLVQRKCEQKDVLFVSCNEKWSPTRLKSLLKKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01110115;
- 90% Identity
- iTF_01110115;
- 80% Identity
- -