Basic Information

Insect: Ormyrus pomaceus
Gene Symbol: -
Assembly: GCA_900474385.1
Location: UCOM01001181.1:24223-29831[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.036 3.5 8.6 0.2 1 23 767 790 767 790 0.95

2 13 0.011 1.1 10.2 0.8 2 21 801 820 800 821 0.95

3 13 0.0033 0.32 11.9 0.9 2 23 829 851 828 851 0.96

4 13 0.0066 0.64 10.9 0.6 2 21 936 955 935 956 0.93

5 13 0.00095 0.092 13.6 3.0 3 23 968 989 966 989 0.95

6 13 0.0013 0.13 13.1 0.7 2 20 999 1017 998 1019 0.93

7 13 0.041 4 8.4 3.9 2 23 1027 1049 1026 1049 0.94

8 13 5 4.8e+02 1.9 3.0 1 23 1143 1166 1143 1166 0.95

9 13 0.013 1.3 10.0 1.9 1 21 1171 1191 1171 1192 0.94

10 13 0.38 37 5.4 4.1 2 22 1200 1220 1199 1220 0.94

11 13 0.042 4.1 8.4 0.2 2 21 1238 1257 1237 1258 0.93

12 13 0.074 7.2 7.6 5.8 2 23 1267 1289 1266 1289 0.95

13 13 0.54 53 4.9 0.8 1 21 1300 1320 1300 1321 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.036	3.5	8.6	0.2	1	23	767	790	767	790	0.95
2	13	0.011	1.1	10.2	0.8	2	21	801	820	800	821	0.95
3	13	0.0033	0.32	11.9	0.9	2	23	829	851	828	851	0.96
4	13	0.0066	0.64	10.9	0.6	2	21	936	955	935	956	0.93
5	13	0.00095	0.092	13.6	3.0	3	23	968	989	966	989	0.95
6	13	0.0013	0.13	13.1	0.7	2	20	999	1017	998	1019	0.93
7	13	0.041	4	8.4	3.9	2	23	1027	1049	1026	1049	0.94
8	13	5	4.8e+02	1.9	3.0	1	23	1143	1166	1143	1166	0.95
9	13	0.013	1.3	10.0	1.9	1	21	1171	1191	1171	1192	0.94
10	13	0.38	37	5.4	4.1	2	22	1200	1220	1199	1220	0.94
11	13	0.042	4.1	8.4	0.2	2	21	1238	1257	1237	1258	0.93
12	13	0.074	7.2	7.6	5.8	2	23	1267	1289	1266	1289	0.95
13	13	0.54	53	4.9	0.8	1	21	1300	1320	1300	1321	0.93

Sequence Information

Coding Sequence: atgcCTTACCATCATCATAATACTATGATCTCACCAGTGGttGTTTTGGAAAGACTTCCTATACAAttcaaacaaaacaattgCCTTAAAGAAGTTAGAATTCCAAAAACAGaaaatgaattaaatcacagtaataaaaatagcttaaaattaaaaaaaatgaaaaagaagtcaacaagatttaaaagaaacctTACAAATATTGCAAATCATTCAGTAACACaaaaatcaaattacaacgataaaaatactttaattggaaaaatggaagctaaactattaaattttaagaaagcccatacaaaaagaaatgtatCTACAAACTCaggtGTATATGGAttgaggagaaaaaaaattttaccaaatGCTGATAAACAACTAAACATGAAATCACCAATAGaagaaaatataaaaaatgaaaacgtaaTGAACGTTGATGAGAATATCAATgtgatgaataaaaatatgatcaaaacaaaaaagagaattgaaaatttaaaaaaagctaagagcaatattggaaaaaaaattagaaataatacaaaaactgAAGatgagattataaataatagaaaaaatgATACTCAAATGATACGTTTAATTATAACTAAAGAATCATCaactaaagaattaaaagtgCAAGATTTTACAACTGAAATGGAACAtgttaaagatattttaacaGTAACTGAGTATGGGAAACAGATACAAACAGATGCTGATTTGATTATGCAAGTTGCAACGAAAGAATCATTTTCTAAAGAACTAGAAGAAGTACAAGATGttacaactaaaataaaatatgttaaagaTACTCTAACTGAGAGTAGAAAACAAATGCAAACAGATTCTATGATCCTTTCAGTTGTAACTAAGAAATCATTGGCTAAAGAACTGGAAGAAGTGCAAGATGTTACAACTGAAATGGAACATGTTAAAGGTATTCCAACAATAACTGAGAATAGGAAACAAATACAAACAGGCACTGGTTTGATTATTCCAGTTGTAACTAAAGAAACATTGGCTAAAGAACTGGAAGAAGTACAAGATGTTACAACTGAAATGGAACATGCTAaagatattgtaaaaataactgAGAATAGGGAACAGTTACAAGTAGACGTAGAAGATAGTAATGatGAAAAATCGGTCGATATTTCTAAGGAAGATTTgattgttgaaaataattcaaaatataaacgtcttaatcattttatcgacaatgaaaaaatagaGATGCAATCTCTAACTGATAAGGACAGAATTGAAAACTTACATGGGATAGatcaaaatacaaataatgaaaaaaatgataaacaaaaaattgaagaacaaatagaaattaatttagaaactgatataaatgtaaacataGTAGCtgagttaaatttaaattctgaagGAAATTCTTTATCTAATGATGAAATAGTTTCAACAGAAGAAAGGTCAATTCTCGAGTTAAATGAAACTAATACAATTAAAGATAAGGTAttagttaatatttcaaatgaaaacatAACTGTAAATGATAACTTAGACATTGCAAGAATTGCCTTTTCGGAATATAACGTAGTGCCTACAGAGAAACCTTCAATTTTTGAGATAAACGAAATGAACAAAAGCGAAGATAATGTTGCTAGCGCGTTAGTAATAAAACACGAAATTATTGAACAAGCGCTAGTTGACTCAAATATCAGTGatgacGGGGAAATTGACAATTTATGTACGAAGTTAACTGCTACCTCGCACTCTAAAAAAGGAATTCATACTGGAGAAacaaacgaaaataatttttatcagtcaGACAATAATGAGACTGATATTTTAACTGGCGATTTGATTATAGATGaacatattgaaaaaatagaaataaacgaaaatgaaGATGATTTGTCATGTAATAGTGAAATCtatgaagaagaaaatactaatttaagtCGTgTCATTGATGCTACAAATGATGATACTATGTGCAATAACGCGGAGTTGGGTAAAAGCAAATCAATTAGTTTAGAGCAAGTGTGTAAACAGATGTCAATTTCagGATTACAGAtgtttgaaaaacattttgatgCAAATGAATGGTCATATATTTCTGAAGAATCTGacGTACCATACGAATTTGTTGATATTCAAtctgttaataaaagtaatgcaAGTGGAACAGCTTCAAGTAGTAAAAGTAGaaGATCAAACATGAAATTTTATCGAGAAATTTGCATGAATTGCAACAAAGTACAAGAAAGAATTAATAACAAGGCTCTAAGTAAGTGCCAGACTTGTCAAGAAGATGTATATTATGCGTGTGTAGAATGCAATAAAGAGTACAAATATATATCTGGAGTATATAAACACGTAATGGTAAACCATACGAAAAATGAGAACCGTCCAAAACCTATTAAATGTTTGAGATGTGGCAGAGAGTTTAAAATGTCGTTTAATATGAAGGATCACTTGAGATTTTGCATGTTAGATGCATGCATACAATGTCCATTTTGTCCATTAAAGACGAAACGTAAATCTTCTGCAAGAAAGCATTTATTAAGAATGCATagtcataaatttaatgtggAAGAAATTGAAGATGTGCTTGAAAAAGTTGTTGAAAACTCGAAAGAGCTTAGAGataAAGCCGAGCAGAAATTAACCAATCAGTTTGGTAGTTCCCCGACTACCTCTCGATTGCGTCCTTTTCCTATCCGCAACTACATACAGCTCTATTGTGATCAGTGCAAGATAGTAATCAAGAAACAGAGCGGTAAGGACCAGCGTAGCTGCTTAAATTGTCGTACTAAACTGCAACTTGAGTGCAGAAAATGTGGTCGACGCTACAAGTATCGCAGCAGCATGTCAATTCACTTACAGAATCAGTGCCTACGAATGGAGCCGATAGTCATAAATTGCGACCAATGCGATTACGTTACCTGCACCAAGTCTCGGCTCACGAGGCACATCCAGCGGCGACACGCGTTCATTCTGCCTAGTGAATATGTTACGTGCAATAGATGTCAGAAGAGTTTTAGGCTGAAGGAAGATTTGAGGAACCACAAGTACATCTGTGGGAAGATTCCACACCTGCACTGTGAGTTTTGCGATTATAGGGCAAAGCATAAGAGTTTACTAAGGTCTCACATTGACAGTAAGCATCCAGAGACGAGAATGGGTATTATTCAGCCGACGAAGAACGGTGTTGGAGATGAGGGAGAAATCATTAGTGAGAGTATAGaaattttagaattcaaaACGGAAAGCGGGTTGGATATCACACCCAATATCATTAACGCTTCAGCAATTTTGTCATtcgaagaaaatttacaatcgcAATTTATATTCGACTCTATCAAAGCCTGCTGCACGAACTGCAACTTAGAAATCCGAGCAATGGAGAAGATAACAAAATGCCAGGTGTGCTGTACACCGTTTATCTACTGTTGCACCCGGTGCAATCAAATTCGTCGCAACTTCATCCTTTTACGTCTCCATGTGATCCGCAAACACAGCGAGAAAACACATCACTGCCCGTCCTGTCAACGCAGTTTCGCCTACGAGAATGACTACCGACAGCACCAAAAAATTTGCAACCTAGCGCCGTATCTTCACTGTCATCGCTGTTCATTTCAAACCAAATACAAAAGCACCTTCCAGGCGCACATCAGACGCGGAACTTGCGTGGTAAATCAAAAACTGATTGTACGAAAGCGTGATAGAGTTTACTGTTATAAGTGCGGAAAAGATTTCGGGTCTCAGCTGATGATGTCGAAGCACATCAATCGGTGCGGATTGTCTAAGAAAATACTCAATTGTAgtcattgtaattttatgacTGCGCATAAGCACCTGCTTATTAATCATATCCAATCTAAACATGCTTCTAGGCTGTTTAGAAATGTTGATGCCTTTCAGTGTAGCGCTTGCACGCTAATGTTCAAGAACTACTTCGTGTACAGTAGACATATTGAGAAAAGAAAGTgccgcgaaaagaaaaagtaa
Protein Sequence: MPYHHHNTMISPVVVLERLPIQFKQNNCLKEVRIPKTENELNHSNKNSLKLKKMKKKSTRFKRNLTNIANHSVTQKSNYNDKNTLIGKMEAKLLNFKKAHTKRNVSTNSGVYGLRRKKILPNADKQLNMKSPIEENIKNENVMNVDENINVMNKNMIKTKKRIENLKKAKSNIGKKIRNNTKTEDEIINNRKNDTQMIRLIITKESSTKELKVQDFTTEMEHVKDILTVTEYGKQIQTDADLIMQVATKESFSKELEEVQDVTTKIKYVKDTLTESRKQMQTDSMILSVVTKKSLAKELEEVQDVTTEMEHVKGIPTITENRKQIQTGTGLIIPVVTKETLAKELEEVQDVTTEMEHAKDIVKITENREQLQVDVEDSNDEKSVDISKEDLIVENNSKYKRLNHFIDNEKIEMQSLTDKDRIENLHGIDQNTNNEKNDKQKIEEQIEINLETDINVNIVAELNLNSEGNSLSNDEIVSTEERSILELNETNTIKDKVLVNISNENITVNDNLDIARIAFSEYNVVPTEKPSIFEINEMNKSEDNVASALVIKHEIIEQALVDSNISDDGEIDNLCTKLTATSHSKKGIHTGETNENNFYQSDNNETDILTGDLIIDEHIEKIEINENEDDLSCNSEIYEEENTNLSRVIDATNDDTMCNNAELGKSKSISLEQVCKQMSISGLQMFEKHFDANEWSYISEESDVPYEFVDIQSVNKSNASGTASSSKSRRSNMKFYREICMNCNKVQERINNKALSKCQTCQEDVYYACVECNKEYKYISGVYKHVMVNHTKNENRPKPIKCLRCGREFKMSFNMKDHLRFCMLDACIQCPFCPLKTKRKSSARKHLLRMHSHKFNVEEIEDVLEKVVENSKELRDKAEQKLTNQFGSSPTTSRLRPFPIRNYIQLYCDQCKIVIKKQSGKDQRSCLNCRTKLQLECRKCGRRYKYRSSMSIHLQNQCLRMEPIVINCDQCDYVTCTKSRLTRHIQRRHAFILPSEYVTCNRCQKSFRLKEDLRNHKYICGKIPHLHCEFCDYRAKHKSLLRSHIDSKHPETRMGIIQPTKNGVGDEGEIISESIEILEFKTESGLDITPNIINASAILSFEENLQSQFIFDSIKACCTNCNLEIRAMEKITKCQVCCTPFIYCCTRCNQIRRNFILLRLHVIRKHSEKTHHCPSCQRSFAYENDYRQHQKICNLAPYLHCHRCSFQTKYKSTFQAHIRRGTCVVNQKLIVRKRDRVYCYKCGKDFGSQLMMSKHINRCGLSKKILNCSHCNFMTAHKHLLINHIQSKHASRLFRNVDAFQCSACTLMFKNYFVYSRHIEKRKCREKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01111328;
90% Identity: iTF_01111328;
80% Identity: -