Opom022747.1
Basic Information
- Insect
- Ormyrus pomaceus
- Gene Symbol
- Rel
- Assembly
- GCA_900474385.1
- Location
- UCOM01000675.1:3729-7802[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-32 3.1e-28 99.2 1.7 1 168 75 266 75 267 0.90
Sequence Information
- Coding Sequence
- ATGCCTTATGCATACGATAATTATATGACGTACGAATGCGATCTGCAGAGGGTGCAGAATTTCTCACCAATGATAGCTGAAGCACAGGAGGgctttcataataataatgATCATTACACGATAAGCACTGCTGGatcaaattattcttttttaatggagATGATTAGAGATGTGACTTGTGTTGACACTTATACTGAACCATTCAGTACAGaaaaagctgaaataaaaatattgattcaaCCTGTAGAGAAGTTTCACTTTAGGTATATTTCTGAACTAAAAGGAACTCATGGAAGCCTTCGAGGTGTTAATAAAACCAATAGCAgttacaaaaaagtatttccTACAGTACAGttAGTTAACTGTCCAGTTAAAAAAGCTGTGATCAGATGTACCTTAGTTACTGCTgatgaaaaaaagagattcTCTCATGCTTATTCATTATCGAAAAAAGAAGGCaatggttttaaaaaagatcCTCATGATATTGAAGTATcagatcaaaataattatacagcAACgTTTTCTAATATGGTAATTACAAATACAAcaaatgataaaattgaagaagaaattttaagaaaggaGATCAATGAGGCATTAGAAAGTAAACGAAGGATAGATGCTAATGCTATAATAACTGAAGAGGAAAAATTAAAGATGAAAGACGAAGCACGAAATGCTCaaaaatcaatgattttaaatacaGTTGTTCTCTGTTTTCAAGGATTTCATTAtggagaaaataatattttataccctttaacagaaaaaatatatagtcaTCCAATCAACAATAGCAaaagcTCATCAACttgcgaattaaaaatttgtcgtatgagtaaattttcaagctcTGTTGAAGGAGATGAAGAAGTTTGGTTACTAGTTGAAAGAGTGTGCAAAGataatatcaaagtaaagttttatgaatatgatgataaagataatattatttggGAAGCAGAAggaaaattcttaaaagagGATGTACATCGTCAGtttgcaattgtttttaaaACACCATGTTATAGAGATGTCACTATTACAAAACCAAAAGAAGTTTGGATAAGATTAGAAAGACCTTCTGATGGAGAAGTttctgaaaagaaaatgtttaaatacaaACCATCAAATAAAGTTATGAatagaaaaaggcctttttcttcttcatttgaaaatgaattcagtcccaatgttaataaaaatcagaatGTTGCATCAGAGGTTTTAACAGGCATAAGGAATTTTATACAAGCAGAGGAAACATTTATGAACTTATCAAATTTGAATGTGACTATAAATGCTGAATTAATTTCTGGAGAATCAAATGCAGTAGTAAATACTGAATTTACATCTGGAGAAATAAGACAATTATTGGAGGAAAATGTTCAATCTGATTTTAAAGAGCTTGAAAATTGGGACCCCAATGAAGCGGAAAgtCTTTTAAGAAtcgattcaataaaaaatgcagcaaGTAGTATTACTCAGGATAGCGCAAGCAATTCTGAACTATCAAaaaaattcgcagaaaataatcttcaaaagataataaaaattttaaaaaattctgaaatgactacaaattcaaaacaaatatcTATCAATAAAGTAACAAAACTCTTACAAGAATCATCAAATCATGGCAATACACCATTACATTGTTCTCTCCAACAAGAGCATTACCAAATTACAAATACCATTCTTAAGATACTAAGTATCAATCCATTACTTAATAGCatcttaaatttacaaaacagtAATGGAGAGACACCACTTCATCTTGcagtattaaataatcaatttgaCATTGTTAAAGTTCTTTTGCAACGTGGAGCTAATCCCAACATACGCGATAAAGAAGGTAGAACTTCTTTACATCGTGCTGTAACagtaaacgCAAGCGCTTGTGTAGACGAACTTATTAACTCGAATATCAAACTGGACCTAGAAGTGCACACGAATTTGGGCTTGACAGCTTTAAACTTAGCAAGTAAAATTGGTTCTCTGCGAATAGTTAAAAAACTCGTGGTAGCTGGAGCTGATGTTAATTCTAGAAACGAGACACATGGAAGTACTTCACTTCACATTGCCGTTGACGGCAATCATACCCAAATCGTTGAATATTTGCTTAAAGAgACTAAGATCAACACCGagttaaaaaactttgaaggACATACAGCCTTGAATAATGCTGTTATTAATGGTGCTGAagagattttaaagattttccaaaaatacaaaactggtttaaaaattggaaaaaatttcacaaactGTTTGGGTGATGAAGAAAATATGTCTGAGGATGAAGTGATGCACCATGAACGAGTCATGTTGCTTGCCGCAAAATTCATTTCTCGTCCCGTTCTGGAAAAACAATCGCCTTTTAGTACtaaaaaagaggagaaacTTACGGATGATCACGTCAAACGGTTAAatcctattttaaataaaaccggAGGATGGGAACGACTAGCCCAATACATAAACCACAGTTCCTTAATTAGACTGTACAAAAAAACTTCGAATCCTTCAGCTACAATTTTTACGAAGATAagaATGCAAGAACCAAACATCAcagtaaagaaaataaaaaaaattctggagGAAATTAAAGAGTTTGAAGCTGCTGCTGAGCTAGAAAATAAGTAG
- Protein Sequence
- MPYAYDNYMTYECDLQRVQNFSPMIAEAQEGFHNNNDHYTISTAGSNYSFLMEMIRDVTCVDTYTEPFSTEKAEIKILIQPVEKFHFRYISELKGTHGSLRGVNKTNSSYKKVFPTVQLVNCPVKKAVIRCTLVTADEKKRFSHAYSLSKKEGNGFKKDPHDIEVSDQNNYTATFSNMVITNTTNDKIEEEILRKEINEALESKRRIDANAIITEEEKLKMKDEARNAQKSMILNTVVLCFQGFHYGENNILYPLTEKIYSHPINNSKSSSTCELKICRMSKFSSSVEGDEEVWLLVERVCKDNIKVKFYEYDDKDNIIWEAEGKFLKEDVHRQFAIVFKTPCYRDVTITKPKEVWIRLERPSDGEVSEKKMFKYKPSNKVMNRKRPFSSSFENEFSPNVNKNQNVASEVLTGIRNFIQAEETFMNLSNLNVTINAELISGESNAVVNTEFTSGEIRQLLEENVQSDFKELENWDPNEAESLLRIDSIKNAASSITQDSASNSELSKKFAENNLQKIIKILKNSEMTTNSKQISINKVTKLLQESSNHGNTPLHCSLQQEHYQITNTILKILSINPLLNSILNLQNSNGETPLHLAVLNNQFDIVKVLLQRGANPNIRDKEGRTSLHRAVTVNASACVDELINSNIKLDLEVHTNLGLTALNLASKIGSLRIVKKLVVAGADVNSRNETHGSTSLHIAVDGNHTQIVEYLLKETKINTELKNFEGHTALNNAVINGAEEILKIFQKYKTGLKIGKNFTNCLGDEENMSEDEVMHHERVMLLAAKFISRPVLEKQSPFSTKKEEKLTDDHVKRLNPILNKTGGWERLAQYINHSSLIRLYKKTSNPSATIFTKIRMQEPNITVKKIKKILEEIKEFEAAAELENK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01112355; iTF_01110698; iTF_01113197;
- 90% Identity
- iTF_01112355; iTF_01110698;
- 80% Identity
- -