Basic Information

Gene Symbol
ZBTB41
Assembly
GCA_900474335.1
Location
UCOL01000085.1:104561-110472[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2.8 3.7e+02 2.6 6.4 2 23 238 260 237 260 0.96
2 20 0.024 3.2 9.1 6.7 1 23 336 358 336 358 0.98
3 20 0.00082 0.11 13.8 0.4 1 23 407 429 407 429 0.96
4 20 0.031 4.1 8.8 0.1 1 20 482 501 482 503 0.94
5 20 0.0039 0.51 11.7 3.7 2 23 544 565 543 565 0.97
6 20 0.00025 0.032 15.4 0.2 1 23 613 635 613 635 0.97
7 20 0.00048 0.063 14.5 0.1 1 23 641 663 641 663 0.97
8 20 5.3e-06 0.00069 20.7 0.8 2 23 707 729 707 729 0.95
9 20 0.00075 0.098 13.9 0.5 2 23 737 759 736 759 0.95
10 20 0.00022 0.029 15.6 1.0 2 23 781 803 780 803 0.92
11 20 0.0001 0.014 16.6 1.3 1 23 825 847 825 847 0.93
12 20 0.098 13 7.2 0.0 2 20 914 932 913 932 0.95
13 20 0.004 0.52 11.6 0.1 2 23 951 972 950 972 0.96
14 20 0.0053 0.7 11.2 6.4 1 23 1015 1037 1015 1037 0.96
15 20 0.025 3.3 9.1 1.3 3 21 1057 1075 1056 1079 0.85
16 20 0.046 6 8.3 0.5 2 23 1141 1163 1140 1163 0.93
17 20 0.0099 1.3 10.4 3.2 3 23 1192 1213 1190 1213 0.90
18 20 0.0036 0.48 11.7 0.2 1 23 1220 1244 1220 1244 0.90
19 20 0.28 36 5.8 5.0 1 23 1249 1272 1249 1272 0.97
20 20 0.0092 1.2 10.5 0.4 2 23 1304 1326 1303 1326 0.95

Sequence Information

Coding Sequence
ATGAGCGATATCGTCGAGGTCAATAGCGGCTTCGAAAATGCCTGCAGGCTGTGCCTTACTACCGAACGAACGAGGTCCTCAATCTTTGCATTGCCGCAGATCAATGTGCCCTTCACCGAAAAAATTCGTTCCTGCGTATCTATTCAGATCTCATcgaatgataaattatcaaCATTGGTTTGCTCAAAATGTATCGACAGCATAAATCATTGGCATTCGTACAAAGATTCTTGTCTCAAATCACAAGAAAAACTCCAACAATGGTTGGCAAAACAGTCTTCTCTTATTcagACTGTAACTATAAAAGAAGAACCAATAGATGATggatatgaaaataattctgtCCAAGGTGTCACCAATGATGCTAATGATGCAAATGTTTCATTAAGCACAAAGAATGCAGGCAAAAAAAGTGATTCTGTTTTAGTTGAACTTTCTGGAcctgaaaaagattttcaaatgataaatgaaataaaaactgaaccTATGGACACTGAAGATGAAGATGACTGTAATGTTGATATTGAGTCAGTTGCCAGTGgagaacttttaattaatccaaTGGCAGTGGCAGCAGGTAATGCAGTTAATAATGACAGAATCATGGAGGCAGATTCAACCCAGAAGTTTAGTACAAAAAAGTATGTAGCAAGAAAAAGAGTACGTCGAGGACCACATACACATTTTAGAGGAACtaaattgtttaagaaaaaatgtgttcaatgtaaaattactttacattCAAAACATTCATTCATGCAGCACATGTCGAAATATCATGGAATTACTAATAGTTTAGCTCCACATGAATATACTGCTAGGGGTCCACTGAGCAAGCCGAAAGCAAAAACAAGTCAAAAGTCAAGTCTTCAAGATAATGTAGAGAATGAACCTGAAGATACTCAGATCCCTGATTACAGTCCAGAAGATGCAGAATATGTGAAAATGGTAACAACAGCTCCTTTGAAAtcaattcaaagaaatataatttcacagttgaaaacttttacttgTTATACGTGTAAGAAAACATTCTTTGATCGACGACATACTTTAAATCATATTAGACAGCATCTGCCTGGTTTGAAACCTTATACGTGCATTGCTTGCCTCACTGAGTTTTCTGATAGATCCATGTACAAACTTCATTGTGGTGCATCCTTTGAATGTGCAATGAAGATTGCTCTTGTAATTCCAAGAACAGGTAGTGAAAAGTATTTCACATGCAACATGTGTCTGCGATCATTTAACAATCGTCAAGAACTTCTAATGCACTTGGCTGCTCATATGGAGAGGCAAAAGCCTCAGTCAGTTCGATCTCCTCAAAAACTTAAACCTATGACTACTAATTATGCACCGACTTCCAGGATAGAAACTTCCCCTTCCAAGAAATCAATCTCAACACTTGCTGGACCGTACATGAATGGAGATCCAGCTCACAATCATATGTGTGATCTATGCGGTATGATCTACCGTTACAGGCCAAATATGATCAAACATCGGGATCTCTGTAATACTCTGGCAGAAGAAATAAGGACTTCCTACAGATGCGTTCATTGCAGCATGACTTATCTAGTATACAAAAAGTTCTATACGCACATTTTCCAAGAACACAAGAAACGAGAGATTACATGCTTCACATGTCATGAGCGATTCACTACGCCTGATGATTACCTTACACACCATGAAACCCATCGTACTGGCGGTGCACCCAATTTTCAGCTACTCAGCGATGCCGCCTCGAACCAACTACCAGCAACAAGCAACGAGGACTATTCAATGGTAGTGGATCATCTTAATTCATCCACCCATCCGACTGACGTGGGCGAGAAACCGTTTAATTGTGCGCTCTGCGGCGAAAGCTTCGTCACAAAGCTCGAGCTGACCGAACACCGCAATCTTCATCTAAAAGTAAAGATTTACTCTTGCGTCATTTGTCGTAGCATGTTCAGTAGCTCCGGAGCTCTTGAGATACATATGAAAGATCACGGTATTCATGATTCTAATGAACAGGCTGCGAATAGCTCTTGCCTTGAGTATGGCCGCGGAGACAGCTCGCAGAGTTCACTTAACGATTCTTCGCTTTCCACCCAGTCGGATCCGGGTAGTCGTTTCAATCGTTGCGGTATATGCggtaaaaacttttctaattacGCTAACTTGAAGAGACACGAAAAGAACCTCCACTTCAAGCAGAGGCGCCGGTGGAGCTGTGACGACTGTAAGCGCCGCTTCAAGTCAATTGAAGCCTTCAACGAACACTTGAAAATAACGCATGGAAAACCGCCGCATGAGCAAGAGGCTCTACCTCAAATGTCTGCTGCTGGAAAACCAATGATGCAGTGTCCGAAATGCCCGAAGACTTTTGCTTATCAAGGCTACCTAATTCAACATTGCCAAACTGTTCACAAAGAGAACCACTATGAACGAGCAAAGGCGACTGCCACAGCTCGCCCATTTGTACCTCGTGGCCACTCTTGCGATATTTGTGGCAAGACCTTCCGTGAGGAACAATCTCTCAAAACCCATCGCGGTTGGCATCTACGCactaattataaactaaaaataaacaagactCCACCAGGAACACCTGTCCCCGAAGAAACTGTAATGAGCGGTCCTGGATACACCGTTACAGCGGTTCCTCAGGCTAAAACTACTGCGCCTAAACCAGCAAAAGCACGTAAGTCCTTCCCCAACAACCCGTCACAAAAGCAGTTAGGAATGATTGCAAATCTACAGTGTCAAGTGTGCGATGATCGTTTTGCTGACGTCGGAGAGTTAAGAAAACATTTATGGGATATCCATTGTGCTCGCAACAAGCCCGAGAAATCTTTTACCACTGATCTGCAATGTGAACTTTGTACTAATAAATTTCCTGACGAAGAAGCTCTCGTAAACCACATGCAGTGGCACAAAGACAATCCTATTCTAAGCGACCATCCGACCGGTCAAGATAGAGTCGATGAAATCGTTGAAGCAGAATCTGCTCTCGATGAAGCAATAACAAATTTGTCAGCTCAAGACGCTAATAAGAAACCTTTCTGCTGCGACACATGTGGCAAGTACTATAGCAATCGTAAGCTCTTCCTTCGCCATCAAAAATTCCACAAAGCAGCACCTGCCTCATTCATGAACTTCCAATCGTTGCAAACAAAACGACCATATTGTCAGCCATGTCAGAAACCGTTCTCCACGGAGGCATCTCTGAAGCGACATAAAGCGTCACCTTGCCACACGTTTATGGTACGAGCCCAAAGACAAGTGCCTGGCAAAAAGATCACAACTACGGCTATGGTTCATGAACAAGCTTCTGAGCCTGTCAAAATTTCGCTTGtcaaaaatgaattagaaGGAGAATACTCGGCAAATCAAGGAGAAAATCAAGCAGCTACTcaagttggaaaaaaaaggcctgtTACGTGTCACATTTGCAACTCAGTCTTTCCAAATATGAGTGTTTTATACCAACACAAACAACTCGTGCACAGTAAAGTGCCGGTAAATCGCAAAACTGTTAAGCAGCAACCAAAAGAATGTGTGCCCATTATAAGTGCAGAAGGTATGGTCTGCTGCAATGTATGTGGAAAGCAATTCCCTGGAATATCGAATCTAAGACAACATTTTTCTCATAAGCACAAATCGAAAAGTAACATGTTTCCGTGTGTTGCGCCAGGATGTAAACTAGTTTTTACCACAGCGCACTCCTTAAAAAGTCACGAAACGGTACATGCAACTACTATTTTCAATTGCCTTCTATGCAACAGGCATGTATTCAGCAAATCTTCGATACACAAACACATGTTGACAATGCATAAAGCAATTTATGATTCCGGTgcaagcaaaaataatttatggacCGAAATAGATTTATCATCGTACCATGTTAAAAATGCCCAGGGGGGTACTGAATGTCCAAAATGTAAAGTTAAATACCCGAATTTGAGAgcgttaaaaattcattacataAAGTTCCATGAAAAGATGAattcataa
Protein Sequence
MSDIVEVNSGFENACRLCLTTERTRSSIFALPQINVPFTEKIRSCVSIQISSNDKLSTLVCSKCIDSINHWHSYKDSCLKSQEKLQQWLAKQSSLIQTVTIKEEPIDDGYENNSVQGVTNDANDANVSLSTKNAGKKSDSVLVELSGPEKDFQMINEIKTEPMDTEDEDDCNVDIESVASGELLINPMAVAAGNAVNNDRIMEADSTQKFSTKKYVARKRVRRGPHTHFRGTKLFKKKCVQCKITLHSKHSFMQHMSKYHGITNSLAPHEYTARGPLSKPKAKTSQKSSLQDNVENEPEDTQIPDYSPEDAEYVKMVTTAPLKSIQRNIISQLKTFTCYTCKKTFFDRRHTLNHIRQHLPGLKPYTCIACLTEFSDRSMYKLHCGASFECAMKIALVIPRTGSEKYFTCNMCLRSFNNRQELLMHLAAHMERQKPQSVRSPQKLKPMTTNYAPTSRIETSPSKKSISTLAGPYMNGDPAHNHMCDLCGMIYRYRPNMIKHRDLCNTLAEEIRTSYRCVHCSMTYLVYKKFYTHIFQEHKKREITCFTCHERFTTPDDYLTHHETHRTGGAPNFQLLSDAASNQLPATSNEDYSMVVDHLNSSTHPTDVGEKPFNCALCGESFVTKLELTEHRNLHLKVKIYSCVICRSMFSSSGALEIHMKDHGIHDSNEQAANSSCLEYGRGDSSQSSLNDSSLSTQSDPGSRFNRCGICGKNFSNYANLKRHEKNLHFKQRRRWSCDDCKRRFKSIEAFNEHLKITHGKPPHEQEALPQMSAAGKPMMQCPKCPKTFAYQGYLIQHCQTVHKENHYERAKATATARPFVPRGHSCDICGKTFREEQSLKTHRGWHLRTNYKLKINKTPPGTPVPEETVMSGPGYTVTAVPQAKTTAPKPAKARKSFPNNPSQKQLGMIANLQCQVCDDRFADVGELRKHLWDIHCARNKPEKSFTTDLQCELCTNKFPDEEALVNHMQWHKDNPILSDHPTGQDRVDEIVEAESALDEAITNLSAQDANKKPFCCDTCGKYYSNRKLFLRHQKFHKAAPASFMNFQSLQTKRPYCQPCQKPFSTEASLKRHKASPCHTFMVRAQRQVPGKKITTTAMVHEQASEPVKISLVKNELEGEYSANQGENQAATQVGKKRPVTCHICNSVFPNMSVLYQHKQLVHSKVPVNRKTVKQQPKECVPIISAEGMVCCNVCGKQFPGISNLRQHFSHKHKSKSNMFPCVAPGCKLVFTTAHSLKSHETVHATTIFNCLLCNRHVFSKSSIHKHMLTMHKAIYDSGASKNNLWTEIDLSSYHVKNAQGGTECPKCKVKYPNLRALKIHYIKFHEKMNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01112877;
80% Identity
-