Olab002645.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- ZBTB41
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000009.1:2590600-2596252[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00091 0.095 13.9 0.4 1 23 327 349 327 349 0.96 2 18 0.035 3.6 8.9 0.1 1 20 402 421 402 423 0.94 3 18 0.0043 0.45 11.7 3.7 2 23 464 485 463 485 0.97 4 18 0.00039 0.041 15.0 0.2 1 23 533 555 533 555 0.97 5 18 0.00053 0.056 14.6 0.1 1 23 561 583 561 583 0.97 6 18 5.9e-06 0.00062 20.8 0.8 2 23 627 649 627 649 0.95 7 18 0.00083 0.087 14.0 0.5 2 23 657 679 656 679 0.95 8 18 0.00025 0.026 15.7 1.0 2 23 701 723 700 723 0.92 9 18 0.00012 0.012 16.7 1.3 1 23 745 767 745 767 0.93 10 18 0.11 11 7.3 0.0 2 20 834 852 833 852 0.95 11 18 0.0044 0.46 11.7 0.1 2 23 871 892 870 892 0.96 12 18 0.003 0.32 12.2 6.6 1 23 935 957 935 957 0.96 13 18 0.028 2.9 9.2 1.3 3 21 977 995 976 999 0.85 14 18 0.034 3.5 8.9 0.5 2 23 1061 1083 1060 1083 0.93 15 18 0.011 1.2 10.5 3.2 3 23 1112 1133 1110 1133 0.90 16 18 0.004 0.43 11.8 0.2 1 23 1140 1164 1140 1164 0.90 17 18 0.31 33 5.9 5.0 1 23 1169 1192 1169 1192 0.97 18 18 0.01 1.1 10.6 0.4 2 23 1224 1246 1223 1246 0.95
Sequence Information
- Coding Sequence
- ATGAGCGACATCGTCGAGGTCAATAGCGGCTTCGAAAATGCCTGCAGGCTGTGCCTTACCACCGAACGAACGAGGTCCTCAATCTTTGCATTGCCGCAGATCAATGTGCCCTTCACCGAAAAAATTCGTTCCTGTGTATCTATTCAGATCTCATCAAATGATAAATTACCAACATTGGTTTGCTCAAAATGTATCGACAGCATAAATCATTGGCATTCGTACAAAGATTCTTGTCTCAAATCACAAGAAAAACTCCAACAATGGTTGGCAAAACAGCCTTCTCTTATtcagacTGTAACTATAAAAGAAGAACCAATAGATGATggatatgaaaataattctgtCCAAGGTGTTACCAATGATGTTAATGATGTAAATGCTTCATTAAGCACAAAGAATACAGGCAAAAAAAGTGATTCTGTTTCAGTTGAACTTTCTGGACccgaaaaagattttcaaatgataaatgaaataaaaactgaacCTATGGACACTGAAGATGAAGATGACTGTAATGTTGATATTGAGTCAGTTGCCAGTGgagaacttttaattaatccaaTGGCAGTGGTCGCAGGTAATGCAGTTAATAATGACAGAGTCATGGAGGCAGATTCAACCCAGAAATTCAGTACAAAAAAGTATCACATGTCGAAATATCATGGAATTACTAATAGTTTAGCTCCACATGAATATACTGCTAGGGGTCCACTGAGCAGGCCGAAAGCAAAAACAGGTCAAAAGTCAAGTCTTCAAGATAATGTAGAGAATGAACCTGAAGATACTCCGATTCCTGATTACAGCCCAGAAGATGCAGAATATGTGAAGATGCACCTGCCTGGTTTGAAACCTTATACGTGCATTGCTTGCCTCACTGAATTTTCTGATAGATCCATGTACAAACTTCATTGTGGTGCATCCTTTGAATGTGCAATGAAGATTGCTCTTGTAATTCCAAGAACAGgcagtgaaaaatatttcacatgCAACATGTGTCTGCGATCATTTAACAATCGTCAAGAACTTCTAATGCACTTGGCTGCTCATATGGAGAGGCAAAAGCCTCAGCCAGTTCGATCtcctcaaaaatttaaacctaTGAATACTAGTTATCCACCAACTTCCAGGATGGAAACTTCACCTTCCAAGAAATCAATCTCAACACTTGCTGGACCATACATGAATGGAGATCCAGCTTACAATCATATGTGTGATCTATGCGGTATGATCTACCGTTACAGGCCAAATATGATCAAACATCGGGATCTCTGTAATACTCTGGCAGAAGAAATAAGGACTTCCTACAGATGCGTTCATTGCAGCATGACTTATCTAGTATACAAAAAGTTCTATACGCACATTTTCCAAGAACACAAGAAACGAGAAATTACATGCTTCACATGTCATGAGCGATTCACTACTCCTGATGATTACCTTACACACCACGAAACCCATCGTACTGGCGGTGCACCCAATTTTCAGCTACTCAGCGATGCCGCCTCGAACCAACTACCAGCAACAAGCAACGAGGACTACTCAATGGTAGTGGATCATCTTAATTCATCCACCCATCCGACTGACGTGGGCGAGAAACCGTTTAATTGTGCGCTCTGCGGCGAAAGCTTCGTCTCAAAGCTCGAGCTGACCGAACACCGCAATCTTCATCTAAAAGTAAAGATTTATTCATGCGTCATTTGTCGTAGTATGTTCAGTAGCTCCGGAGCTCTTGAGATACATATGAAAGATCACGGTATTCACGATTCTAATGAACAGGCTGCGAATAGCTCTTGCCTTGAGTATGGCCGCGGAGACAGCTCGCAGAGTTCACTTAACGATTCTTCGCTTTCCACCCAGTCGGATCCGGGTAGTCGTTTCAATCGTTGCGGTATATGCggtaaaaacttttctaattacGCTAACTTGAAGAGACACGAAAAGAACCTCCACTTCAGGCAGAGGCGCCGGTGGAGCTGTGACGACTGTAAGCGCCGcttcaagtcaattgaagccTTCAACGAACACTTGAAAATAACGCATGGAAAACCGCCGCATGAGCAAGAGGCTCCACCTCAAATGTCTGCTGCTGGAAAACCAATGATGCAGTGTCCGAAATGCCCGAAGACTTTTGCTTATCAAGGCTACCTAATTCAACATTGCCAAACTGTTCACAAAGAAAACCACTATGAACGAGCAAAGGCGATTGCCACAGCTCGCCCATCTGTACCTCGCGGCCACTCTTGCGATATTTGTGGCAAGACCTTCCGTGAGGAACAATCTCTCAAAACCCATCGCGGTTGGCATCTACGCactaattataaactaaaaataaacaagactCCACCAGGAACACCTATCCCCGAAGAAACTGTAATGAGTGGTCCTGGATACACCGTTACAGCGGTTCCTCAGGCTAAAACTACTGCGCCTAAACCAGCAAAAGCACGAAAGTCCTTCCCCAACAACCCCTCACAAAAGCAGTTAGGAATGGTTGCAAATCTACAGTGTCAAGTGTGCGACGATCGTTTTGCTGATGTCGGAGAGTTAAGAAAACATTTATGGGATATCCATTGTGCTCGCAACAAGCCCGAGAAATCTTTTACCACTGATCTGCAATGTGAACTTTGTACTAATAAATTTCCTGACGAAGAAGCTCTCGTAAACCACATGCAATGGCATAAAGACAATCCTATTCTAAGCGACCATCCAAACGGTCAAGGTAGAGTCGATGAAATCGCCGAAGCAGAATCAGCTCTCGATGaagcaataacaaatttatcaaCTCAAGACGTTAATAAGAAGCCTTTCTGCTGCGACACATGTGGCAAGTTCTATAGCAATCGTAAGCTTTTCCTTCGCCATCAAAAATTCCACAAAGCAGCACCTGCCTCATTTATGAACTTCCAGTCGTTGCAAACAAAACGACCATATTGTCAGCCGTGTCAGAAACCGTTCTCCACGGAAGCATCTCTGAAGCGACATAAAGCGTCACCTTGCCACACGTTTATGGTACGAGCCCAAAGACAAGTGCCTGCCAAAAAGATCACAACTACGGCTATGGTTCATGAACAATCTTCTGAGCCTATAAAAATTTCGCTTgtcaaaaatgaattagaaGGAGAATACTCGGCAAATCAAGGAGAAAATCAAGCAGCTACTCAAGTTAGCAAAAAAAGGCCTGTTACGTGTCACATTTGCGACTCAGTCTTTCCAAATATGAGTGTTTTATACCAACACAAACAACTCGAGCACAGTAAAGTGCCGGTAAATCGCAAATCTGTTAAGCAGCAACCAAAAGAATGTGTGCCCATTATAAGTGCAGAAGGTATGGTCTGCTGCAATGTATGTGGAAAGCAATTCCCTGGAATATCGAATCTAAGACAACATTTTTCTCATAAGCACAAATCGAAAAGTAACATGTTCCCGTGCGTTGCACCAGGATGTAAACTAGTTTTTACCACAGCGCACTCCTTAAAAAGTCACGAAACGGTACATGCAACTACTATTTTCAACTGCCTTCTATGCAACAGGCATGTATTCAGCAAATCTTCGATACACAAACACATGTTAACAATGCATAAAGCAATTTATGATTCCGGTgcaagcaaaaataatttatggacCGAAATAGATTTATCATCGTACCATGTTAAAAATGCCCAGGGGGGTACCGAATGTCCAAAATGTAAAGTTAAATACCCGAATTTGAGAgcgttaaaaattcattacataAAGTTCCATGAAAAGATGAATTCATAA
- Protein Sequence
- MSDIVEVNSGFENACRLCLTTERTRSSIFALPQINVPFTEKIRSCVSIQISSNDKLPTLVCSKCIDSINHWHSYKDSCLKSQEKLQQWLAKQPSLIQTVTIKEEPIDDGYENNSVQGVTNDVNDVNASLSTKNTGKKSDSVSVELSGPEKDFQMINEIKTEPMDTEDEDDCNVDIESVASGELLINPMAVVAGNAVNNDRVMEADSTQKFSTKKYHMSKYHGITNSLAPHEYTARGPLSRPKAKTGQKSSLQDNVENEPEDTPIPDYSPEDAEYVKMHLPGLKPYTCIACLTEFSDRSMYKLHCGASFECAMKIALVIPRTGSEKYFTCNMCLRSFNNRQELLMHLAAHMERQKPQPVRSPQKFKPMNTSYPPTSRMETSPSKKSISTLAGPYMNGDPAYNHMCDLCGMIYRYRPNMIKHRDLCNTLAEEIRTSYRCVHCSMTYLVYKKFYTHIFQEHKKREITCFTCHERFTTPDDYLTHHETHRTGGAPNFQLLSDAASNQLPATSNEDYSMVVDHLNSSTHPTDVGEKPFNCALCGESFVSKLELTEHRNLHLKVKIYSCVICRSMFSSSGALEIHMKDHGIHDSNEQAANSSCLEYGRGDSSQSSLNDSSLSTQSDPGSRFNRCGICGKNFSNYANLKRHEKNLHFRQRRRWSCDDCKRRFKSIEAFNEHLKITHGKPPHEQEAPPQMSAAGKPMMQCPKCPKTFAYQGYLIQHCQTVHKENHYERAKAIATARPSVPRGHSCDICGKTFREEQSLKTHRGWHLRTNYKLKINKTPPGTPIPEETVMSGPGYTVTAVPQAKTTAPKPAKARKSFPNNPSQKQLGMVANLQCQVCDDRFADVGELRKHLWDIHCARNKPEKSFTTDLQCELCTNKFPDEEALVNHMQWHKDNPILSDHPNGQGRVDEIAEAESALDEAITNLSTQDVNKKPFCCDTCGKFYSNRKLFLRHQKFHKAAPASFMNFQSLQTKRPYCQPCQKPFSTEASLKRHKASPCHTFMVRAQRQVPAKKITTTAMVHEQSSEPIKISLVKNELEGEYSANQGENQAATQVSKKRPVTCHICDSVFPNMSVLYQHKQLEHSKVPVNRKSVKQQPKECVPIISAEGMVCCNVCGKQFPGISNLRQHFSHKHKSKSNMFPCVAPGCKLVFTTAHSLKSHETVHATTIFNCLLCNRHVFSKSSIHKHMLTMHKAIYDSGASKNNLWTEIDLSSYHVKNAQGGTECPKCKVKYPNLRALKIHYIKFHEKMNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01112877;
- 90% Identity
- iTF_01111218;
- 80% Identity
- -