Onit014762.1
Basic Information
- Insect
- Ormyrus nitidulus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_900474335.1
- Location
- UCOL01000087.1:15718-17478[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-102 9.6e-98 327.9 36.8 1 300 28 322 28 322 0.94 2 3 0.0038 1.2e+02 2.6 3.6 122 171 322 371 320 377 0.90 3 3 0.049 1.5e+03 -1.0 5.6 137 236 358 394 341 397 0.49
Sequence Information
- Coding Sequence
- ATGGAGTCATCTGTAGCTGGCAGGCGGCGTACTGCCACCAGACATTCTGCAGATCAAGTGTTAGATCGAATTGCTAAAGAGGCAGAGGCAAGGTTAGCTGCAAGAAGACAAGCTAGAGCAGAAGCAAGAGAAATAAGAATGAAAGAATTGGAAAGACAAcaaaaagaagcagaagaaaGTGCAGACAGAGTGTTGTGTATAATAGATACCAATAGAGCCATGAGGGTAACTCCTGATCCCGCACGTGCTTCTCGTCTCCTTgcaaattctaataattttcagtcaaGTCGGAGGTCTTCTGAAGATTCTCTTGAAGATGCCGGTGTTAGTAGAGATCTTCGTCTGGAGCTGAAGGAGttggaagaaaaatttaaaaatgcaatgatTGCAAATGCTCAATTGGACAATCTTAAGTGTACTCATGTATATCaacttgaattattaaaagatcaaGTAGAAGAACTTGAAGTAAAAAACGCAGATCTAAAACGTCAAAATAAAGAGAAGAATCGCGAAGTAGATCAGACAAAACGCGAATGTCAACGGTACAAAGAAGAATTGGAAATATACAGGGCACAGCTTCAAGAAAGAGATACTTTGATACAAGAATATGGTTTAGTCATAGTAGAAGATGAAGGTAGTGAAGGTGAAGAATTACAGAAAGAAAATGGAACTATTTGTAGAAAAAGAGTGCTAGTCAGTATTGAAGCTGCAGAATTGTTGCAAAATGCTGGAGAAGGTTCTTTAgATGTTCGGCTGAAGAAATTTGCATCAGAAAGGAAGGAAATGCAGGATGAAATTAGACATCTTACATTAGAGGTAGAAGATGCAAGAAATCGAATGAGGCCAGAGCGATCTTTAGTTTCATCATtaggtTCAGATTCAGAAGATACTCAAAGAGAAGCAAATAAACTGCTAGCAGAATATAAGTTTAAACTACAAAAAGCAGAACAAGATATGTCAACCCTTCAAGCAACTGTGGCAAGGCTAGAAAGTCAAGTGATTCGTTATAAATCATCAGCTGAAGCTTCTGAGAAAGCTGAAGatgaattaaaagtagaaaaaagaaagctacAAAGAGagattAGAGAATCGCAAGCTCGAGTTGAAGAGCTAGAAACGGCCAATTCACATTTGCAACGACGTTTggataaactgaaaaatgctAAATCGACGCTCTTCAAAGAACTTTGA
- Protein Sequence
- MESSVAGRRRTATRHSADQVLDRIAKEAEARLAARRQARAEAREIRMKELERQQKEAEESADRVLCIIDTNRAMRVTPDPARASRLLANSNNFQSSRRSSEDSLEDAGVSRDLRLELKELEEKFKNAMIANAQLDNLKCTHVYQLELLKDQVEELEVKNADLKRQNKEKNREVDQTKRECQRYKEELEIYRAQLQERDTLIQEYGLVIVEDEGSEGEELQKENGTICRKRVLVSIEAAELLQNAGEGSLDVRLKKFASERKEMQDEIRHLTLEVEDARNRMRPERSLVSSLGSDSEDTQREANKLLAEYKFKLQKAEQDMSTLQATVARLESQVIRYKSSAEASEKAEDELKVEKRKLQREIRESQARVEELETANSHLQRRLDKLKNAKSTLFKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01110117;
- 80% Identity
- iTF_01110117;