Basic Information

Insect: Ormyrus labotus
Gene Symbol: -
Assembly: GCA_035582975.1
Location: JAWWEO010000009.1:32882081-32885482[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00031 0.032 15.3 0.7 1 23 253 275 253 275 0.97

2 11 0.0027 0.29 12.4 0.8 1 23 282 305 282 305 0.92

3 11 0.0005 0.053 14.7 6.5 1 23 352 374 352 374 0.99

4 11 5.2e-05 0.0055 17.8 0.4 2 23 476 497 475 497 0.97

5 11 5.2e-06 0.00055 20.9 1.7 1 23 502 525 502 525 0.95

6 11 2.9e-05 0.0031 18.6 0.1 1 23 553 575 553 575 0.97

7 11 7.8e-07 8.2e-05 23.5 0.8 1 23 585 607 585 607 0.96

8 11 1.1e-06 0.00011 23.1 1.2 1 23 613 635 613 635 0.99

9 11 1.4e-05 0.0015 19.5 0.2 1 23 641 663 641 663 0.98

10 11 0.00019 0.02 16.0 4.5 1 23 669 691 669 691 0.98

11 11 0.00098 0.1 13.8 0.2 1 21 697 717 697 718 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00031	0.032	15.3	0.7	1	23	253	275	253	275	0.97
2	11	0.0027	0.29	12.4	0.8	1	23	282	305	282	305	0.92
3	11	0.0005	0.053	14.7	6.5	1	23	352	374	352	374	0.99
4	11	5.2e-05	0.0055	17.8	0.4	2	23	476	497	475	497	0.97
5	11	5.2e-06	0.00055	20.9	1.7	1	23	502	525	502	525	0.95
6	11	2.9e-05	0.0031	18.6	0.1	1	23	553	575	553	575	0.97
7	11	7.8e-07	8.2e-05	23.5	0.8	1	23	585	607	585	607	0.96
8	11	1.1e-06	0.00011	23.1	1.2	1	23	613	635	613	635	0.99
9	11	1.4e-05	0.0015	19.5	0.2	1	23	641	663	641	663	0.98
10	11	0.00019	0.02	16.0	4.5	1	23	669	691	669	691	0.98
11	11	0.00098	0.1	13.8	0.2	1	21	697	717	697	718	0.93

Sequence Information

Coding Sequence: ATGGACCAGGTGAAGATCTACGCCGGCGGCGGGCAGGCTCACCTCCTGGTGAACGAGCTCGTCGAGAGGACCTGCAGGCTGTGCATCAGAAAACTGGACGAGGAGACCAGACATTGGGCACTCTTCGAGGCCGATTTGCCCCAGAAACTTATGGCTTTCGCTGCTGTACAGattcaaGAAAATGATGGGTTACCTGCAGTTATTTGTTCAAATTGTCACAGTTTAATTTACATGgcatacaattttaaatgtcaGGTAGAAAAAAGTGACCATGACTTGCGTCAAGCTCTCCTTCTAAAACAATCAACAGATTGGTCTCCCGTTCcaaatataaaatctattgaaaatataactgCAATTGAAGTCATGACACCCTGTCTTCAGAAAAGTATTATGAACTCCTGTATGGAAATTCACAACGAGCATAATCCAAACTCACatgaacaatttatttttgaaattgctaACAGTATAGACAGTCAGACGTGCAAACCAGATGAACTTTCCTCAACAAGCAGTTCGATATTATCAGgaaatataattcataataataattcaatatcttttgaaaTGAATAGTACTGTGCCAGAAGATAAAAGTAATAGTCAAGATGCTATTGTAGAATTTGAGGCAGAGTATGAAATGAAAAGCgaattggaagaaaaaaataaaaaagaaaagttagatccaataaattttaaagaaaattcaaatccaaGCGAAGAAGAAAAGCCTATAATGTTACGAACAAAACGtcataaatgtaattattgtataaaatcgTTTGCTAATTTAGCTTTGTTAGAAAAACATGCTATGGTTCATAAAAAGAtagaaacagtttttatttgtcaTTTATGCAATAAGCAATTTAGTACTGttgataaagtaaaaagtcaTGCTATGGCAGCTCATGGAATGCATgtggaaagagaaaaaataatggagaattctaaaatgaaaagGATCACTGGTTGGGTCAAAAAAATTGGTGAAGATAATACACAACATAGTAATTCCAttgaaaatgatataaataaacaagttgatgtatttacatgtaaatattgttgtaggcaattttcaaatcaaaaatCTTTGACAgctcatcaaaaaactcattcAGATccgaatattaataaagtattaaatgaattaaataagaGTCCATCAACTGTAAATGAAGGAAATACTTCTTCAGTAGAAACTGATTCTCAACCATATGACACAGAAACTAATtccattttaacaaatttagaaaataattttcaacccACATTTGAAGAAACAAATAATGAAGAGAAAACTCGTGAAGAAAGTTATATTTCTCAAGATGATAGCATGGATGAATCTGAatcagaagaagaagaagaagatgacGATGACGAACAAAGAGAAAATGACGATACACTTTCAGAAAATATACAGTGTAATCAGTGTGGTAAGCTTGTTGCAACTTTAAGGAATCTCAAAAGGCATCTCTTGACTCATTCTGGCCTCAAACACAATTGTTCAATATGTGGTAAAGATTTTTCAAGGCCTGACAAACTAAGGGAGCATCAGCAATTAAAACACAAAGAGGAACTGTTTGGAAAGTCAGATTCTGATAACGAATCTTCTGATGATAATAAGAAAAAGgaCAAAAATAATAGGCCCTTTAAGTGTTCATTATGTCCTAAAGCGTTTGCCCAGCCACAGTCATTAGCAAACCACGAGGAAAGGCACAAACGAACTCGGGACGTACAGAAGCGTTACTTGTGCGAGGTTTGCAGTAAATGCTTTGCTCAGAGTGGATCTCTGGTTGCTCATATGCGTACTCACACAGGTGTGAAACCCTACGTTTGCAACGTTTGCAACAGAGCATTTACGAAAAGCACGTATCTTCAATTGCACCTCAGAACGCACAGCGGGGAAAAACCGTACATTTGCCAATATTGTAGCAGAGCGTTTGCTCGAGCAAATACTCTCGCTCGGCATATAACTATGCATACAGGAGAAGCAAAGTATCATTGCCAGGTCTGCACCAAATCTTTCCGGAGATTAACGTCTCTGAATGAACACACTTACACGCATACGGGTCAAAGACCTTATGCGTGCAAAATTTGTTCTAAAAGATACAACAATGCAGGATCGTTGTATGCTCACGCAAAAAAATGCAAGGCAATGCAAGCTACGTCGGCTAATTCCAATTTAGATCCACTTTCGATTCACATTGGAGAAAACAGTGTACCACCGGCAAGCGACAATAATCCTCCGCAACCGCTTCTCATTTTCACAGACAAGAATATGGATGAGGTGATAACGGATGAGGGAATAGCAACTGAACCTCCGACATGCCAATTCATGATTACGAATGTACCAGCTCAGAAGCCGATGCCCACTAGTAACTTGCTTGAAACGTTTATGATTCAAGAACCCGACATTTACAACATGAAcgcaaaacaatttaaaacgcCCTATTACGGATTGTATCCAAGTAtgtag
Protein Sequence: MDQVKIYAGGGQAHLLVNELVERTCRLCIRKLDEETRHWALFEADLPQKLMAFAAVQIQENDGLPAVICSNCHSLIYMAYNFKCQVEKSDHDLRQALLLKQSTDWSPVPNIKSIENITAIEVMTPCLQKSIMNSCMEIHNEHNPNSHEQFIFEIANSIDSQTCKPDELSSTSSSILSGNIIHNNNSISFEMNSTVPEDKSNSQDAIVEFEAEYEMKSELEEKNKKEKLDPINFKENSNPSEEEKPIMLRTKRHKCNYCIKSFANLALLEKHAMVHKKIETVFICHLCNKQFSTVDKVKSHAMAAHGMHVEREKIMENSKMKRITGWVKKIGEDNTQHSNSIENDINKQVDVFTCKYCCRQFSNQKSLTAHQKTHSDPNINKVLNELNKSPSTVNEGNTSSVETDSQPYDTETNSILTNLENNFQPTFEETNNEEKTREESYISQDDSMDESESEEEEEDDDDEQRENDDTLSENIQCNQCGKLVATLRNLKRHLLTHSGLKHNCSICGKDFSRPDKLREHQQLKHKEELFGKSDSDNESSDDNKKKDKNNRPFKCSLCPKAFAQPQSLANHEERHKRTRDVQKRYLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCNRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQVCTKSFRRLTSLNEHTYTHTGQRPYACKICSKRYNNAGSLYAHAKKCKAMQATSANSNLDPLSIHIGENSVPPASDNNPPQPLLIFTDKNMDEVITDEGIATEPPTCQFMITNVPAQKPMPTSNLLETFMIQEPDIYNMNAKQFKTPYYGLYPSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01112041;
90% Identity: iTF_01113640;
80% Identity: -