Olab009653.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- -
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000045.1:10311179-10314018[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-12 7.3e-09 35.9 0.0 1 35 54 89 54 95 0.92
Sequence Information
- Coding Sequence
- ATGACCCCCCCGTGTCGCATTCACACGGGAGCCTCGACGGGAAGAGGAGGATGCCACCGTGCCAAGTTGTTGGAATCGTCCCACGCTTGGCTCGGAGCCTCCACCTCCAGTATAGCAGCTGACTACTCGAGCCTGCTGAAGCTGAAGGCGCCGACGTGGACGCGGCAAGAGCTGCAGGAGGCCATCGAGGCCGTCGTCACGCAAAAGATGCGCTTCACCCAGGCCTCGAGCAAGTACGGCATCCCCAAGGGCACGCTCTACGACAACATCCTCGGCAAGTCCAAGAGGATGATGGTCCTCGAGGAGGCGGGCCTCGACGGCCCCGAGGAGACGGCCGTCCTCGAGTTCTGCTGCGACATCAGCGTCAGCCCGTACAACCGCAGAACGAAAAAGTCCCTGAACGCGATCCTCAACTTCGTCGAGAAGCTCAGGCGGCAGCGGGACCCCGGATTCTCGTTCTCCGGGCTCTCGGGCTTCCGCTGGTGGTGGGCCTTTTGCAAGAAGCACGGCATCGTCTCGCTCTACTTCAACGACGAGAACGACAACGAATGA
- Protein Sequence
- MTPPCRIHTGASTGRGGCHRAKLLESSHAWLGASTSSIAADYSSLLKLKAPTWTRQELQEAIEAVVTQKMRFTQASSKYGIPKGTLYDNILGKSKRMMVLEEAGLDGPEETAVLEFCCDISVSPYNRRTKKSLNAILNFVEKLRRQRDPGFSFSGLSGFRWWWAFCKKHGIVSLYFNDENDNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113332;
- 90% Identity
- iTF_01467011;
- 80% Identity
- iTF_01111678;