Ooch001493.2
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- pnr
- Assembly
- GCA_963402855.1
- Location
- OY727105.1:23200673-23203439[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 2.2e-14 52.8 3.1 1 34 122 154 122 156 0.96 2 2 2.7e-18 3.9e-15 55.2 5.4 1 35 179 212 179 213 0.98
Sequence Information
- Coding Sequence
- ATGTATCATTCATCAGCCGGGTATGCCGATTTAACTGGCAGTGCAAGAGGTTCGGGTGTTAGTTCCTATCATCAACAAGCAGCGGCTGCTGCCGCCACGGTCAGTGCTCCCGTGTATGTGCCTTCCAACCGAGCTCTAACCAATGGTCAATATCCACATGTGGCTCATTTTGGTACTTCTGCCGCCCAAAATGCTTGGACTTCAGATAGCTTTGGTACAGCTCATGCCCAGTTACCTCACCAATTCTATACACAAAACGCTGTAATGATGACTCCTTGGAGAGCAACATATGATCCTACTGGTTTTCAGCGCTCATCTCCTTACGATGGTGCTATAGATTTCCCATATGAGGAAGGTAGAGAGTGTGTTAATTGCGGTGCTATTAATACGCCTTTGTGGAGGCGAGATCGTGCCGGTCATTACTTGTGTAACGCTTGCggattgtataataaaataaatggcatGAATAGGCCGTTGATCAAGCCAAGCAAGCGACTGGTGAGTGCAactGCCTCACGCCGGGTGGGTTTATGTTGCACGAATTGTGCCACACGAACGACTACTTTATGGCGCCGTAACAACGATGGAGAGCCAGTGTGTAATGCTTGTGGTCTGTACTTTAAATTGCACGGTGTTAACAGGCCTCTGGCCATGCGCAAAGACGGCATACAAACGAGAAAAAGGAAGGCTAAAAAAGCCGTTGCGGCCATTGAAAACGGCAAAGAGATTAAAGATGATGatcTCAAACCATCTTTAGGGTTGGAGCGACATAGTCTACCTGGTGCTTTAGCTTCAAAGTTGCAAAATGATTTAGGAGTAAAATCGACTAGTTCATCGTTGCATAATTTAAGCTTAGGATCAGCTACATCTGCTTTGCACAACTCTCTCAGCCATCATATGCATCTGCCGCATACTTCAGCTCAACAAACAAGGTTATTAAACAATGTTACTTCGCACACATCATCCGCCCACATTGGTTCCAATACAAATACCTCCACTGCTAACGGCAACACATCACAAAGCAATCATTTATATTCGCCATCAGCTTTAGCCGCCCAAAGCAATTTAAGTCACTCGCAACTATCGGGATCGGCATTTGGAACACAAAAATACGAGCATCTGTTGGGCACCAGCAGCGCCTTATCGAATGGTTTATCGCCATCGAGTGTGGCCAGTTCGAATTATCATGCCCACCACCATTTGCACCAACACCATGCTGCTGCAGCGGCTCATCATGCGGCATCGGCAGCTCATCACCACCACCATCATCATTCCCCTGGCTTGCCGCAACACGTTCCCACATCCGCAAGCAATGCTGGCAGCCTCGGTTATAGTGTTAAATCTGAAACGAACGCAACCAACTACGATTATGTCAACAACTGCTATTTCGCTTCATCGTTTGGCGCTTTAGGTGGTTCAACGGGTTCTTCATCTGGAATACACAGTGCTGCGGCATCGGACATGGCGGGAGTATATCATCATCAACACAATGCAATACAAACGGCCAAATTGATGGCCActtcataa
- Protein Sequence
- MYHSSAGYADLTGSARGSGVSSYHQQAAAAAATVSAPVYVPSNRALTNGQYPHVAHFGTSAAQNAWTSDSFGTAHAQLPHQFYTQNAVMMTPWRATYDPTGFQRSSPYDGAIDFPYEEGRECVNCGAINTPLWRRDRAGHYLCNACGLYNKINGMNRPLIKPSKRLVSATASRRVGLCCTNCATRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKAKKAVAAIENGKEIKDDDLKPSLGLERHSLPGALASKLQNDLGVKSTSSSLHNLSLGSATSALHNSLSHHMHLPHTSAQQTRLLNNVTSHTSSAHIGSNTNTSTANGNTSQSNHLYSPSALAAQSNLSHSQLSGSAFGTQKYEHLLGTSSALSNGLSPSSVASSNYHAHHHLHQHHAAAAAHHAASAAHHHHHHHSPGLPQHVPTSASNAGSLGYSVKSETNATNYDYVNNCYFASSFGALGGSTGSSSGIHSAAASDMAGVYHHQHNAIQTAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109779;
- 90% Identity
- iTF_01109779;
- 80% Identity
- -