Ooch001491.2
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- pnr
- Assembly
- GCA_963402855.1
- Location
- OY727105.1:23163209-23166104[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.8e-14 53.1 3.1 1 34 92 124 92 126 0.96 2 2 2.2e-18 3.2e-15 55.5 5.4 1 35 146 179 146 180 0.98
Sequence Information
- Coding Sequence
- ATGTATCATTCATCAGCCGGGTATGCCGATTTAACTGGCAGTGCAAGAGGTTCGGGTGTTAGTTCCTATCATCAACAAGCAGCGGCTGCTGCCGCCACGGTCAGTGCTCCCGTGTATGTGCCTTCCAACCGAGCTCTAACCAATGGTCAATATCCACATGTGGCTCATTTTGGTACTTCTGCCGCCCAAAACGCTTGGACTTCAGATAGCTTTGGTACAGCTCATGCCCAGTTACCTCACCAATTCTATACACAAAACGCTGAAGTTAGAGAGTGTGTTAATTGCGGTGCTATTAATACGCCTTTGTGGAGGCGAGATCGTGCCGGTCATTACTTGTGTAACGCTTGCggattgtataataaaataaatggcatGAATAGGCCGTTGATCAAGCCAAGCAAGCGACTGactGCCTCACGCCGGGTGGGTTTATGTTGCACGAATTGTGCCACACGAACGACTACTTTATGGCGCCGTAACAACGATGGAGAGCCAGTGTGTAATGCTTGTGGTCTGTACTTTAAATTGCACGGTGTTAACAGGCCTCTGGCCATGCGCAAAGACGGCATACAAACGAGAAAAAGGAAGGCTAAAAAAGCCGTTGCGGCCATTGAAAACGGCAAAGAGATTAAAGATGATGatcTCAAACCATCTTTAGGGTTGGAGCGACATAGTCTACCTGGTGCTTTAGCTTCAAAGTTATTAAACAATGTTACTTCGCACACATCATCCGCCCACATTGGTTCCAATACAAATACCTCCACTGCTAACGGCAACACATCACAAAGCAATCATTTATATTCGCCATCAGCTTTAGCCGCCCAAAGCAATTTAAGTCACTCGCAACTATCGGGATCGGCATTTGGAACACAAAAATACGAGCATCTGTTGGGCACCAGCAGCGCCTTATCGAATGGTTTATCGCCATCGAGTGTGGCCAGTTCGAATTATCATGCCCACCACCATTTGCACCAACACCATGCTGCTGCAGCGGCTCATCATGCGGCATCGGCAGCTCATCACCACCACCATCATCATTCCCCTGGCTTGCCGCAACACGTTCCCACATCCGCAAGCAATGCTGGCAGCCTCGGTTATAGTGTTAAATCTGAAACGAACGCAACCAACTACGATTATGTCAACAACTGCTATTTCGCTTCATCGTTTGGCGCTTTAGGTGGTTCAACGGGTTCTTCATCTGGAATACACAGTGCTGCGGCATCGGACATGGCGGGAGTATATCATCATCAACACAATGCAATACAAACGGCCAAATTGATGGCCActtcataa
- Protein Sequence
- MYHSSAGYADLTGSARGSGVSSYHQQAAAAAATVSAPVYVPSNRALTNGQYPHVAHFGTSAAQNAWTSDSFGTAHAQLPHQFYTQNAEVRECVNCGAINTPLWRRDRAGHYLCNACGLYNKINGMNRPLIKPSKRLTASRRVGLCCTNCATRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKAKKAVAAIENGKEIKDDDLKPSLGLERHSLPGALASKLLNNVTSHTSSAHIGSNTNTSTANGNTSQSNHLYSPSALAAQSNLSHSQLSGSAFGTQKYEHLLGTSSALSNGLSPSSVASSNYHAHHHLHQHHAAAAAHHAASAAHHHHHHHSPGLPQHVPTSASNAGSLGYSVKSETNATNYDYVNNCYFASSFGALGGSTGSSSGIHSAAASDMAGVYHHQHNAIQTAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109780; iTF_01109781;
- 90% Identity
- iTF_01109780; iTF_01109781;
- 80% Identity
- -