Ooch001202.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- dmd-4
- Assembly
- GCA_963402855.1
- Location
- OY727105.1:18047876-18051337[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-24 7.2e-21 73.9 11.8 1 47 46 92 46 92 0.98 2 2 0.45 2.1e+03 -1.3 0.8 23 32 324 333 322 337 0.72
Sequence Information
- Coding Sequence
- ATGTCCTCTTTAGTGAATGTAACTGATAATAAGGAAATGTTGTCGACTGGCAAAGTTTTGGTTGGGAAAAAAACTCGTAAATCGTTAAAGTCTCTGACGGCGGAATACCCATCAAGTAAATCCTCCGCAACAAATCGCGTTCCGAAATGTGCGCGTTGCCGTAATCACGGCTGGATATCGGAGTTGCGGGGCCACAAAAAACACTGCACTTATAAGAATTGTCGTTGTGCCAAGTGCGTTTTGATTTTTGAGAGGCAGAGAATAATGGCGGCCCAGGTTGCCCTGAAGCGTCAACAGGCCGTGGAGGATGCGATTGCTTTACGTTTAGTGTCCACTAAAACTGGCCAAGAAATGGACAGCCTGCCACCGGggaatatatttgatttagcagaaaatttgcaaaacaGCGAAACAGCAAACGCCTCACAGCAAGAAGCTGTTGAAGACTtaagtttaaataacaaacaagcGGCGTGTTTGCAAACAATCTCAAGAAGTAATTCGGAAGAGGGCAGCATTGATAAATCATCAAAGGGAACTTTGCTATCCAATATTACTATCACTTCGTCCAACAGGAGCTGCTTGCCCGATGCCCGAGTTTCACAAAATGCCATCGACATGTTGGCCCAGCTATTTCCTAAGAGGAAACGCTCAATCTTGGAGTTGGTGTTAAGAAGATGCGATTCAGATTTGGTTAAAGCCATAGAGAATATATCAAATTCGTATAAAGAACCTCAAGGAGAGATTGAGAATCGCATTGAGCACGGAGCggcaaatgtaattaaaagcgCTTTTAAGCCGGTTCACAGTTCAGCAAATGTGaATTCTAAGCCTTTAACCCTTGGTAGCTCTGTATGCTCCACGACTACAGCTTATCCGAAATGGTTTGTGCCACTTACATTTCCCATAACCTTTCAAGGACATTTAGCATCAGCATTGCCGCCAACATCGATACCCCCACTTACCGCACGTTGTACTCTGCCAAATTGTACATGCCTAGAGAGTTATCAGTTCAATTGTTAA
- Protein Sequence
- MSSLVNVTDNKEMLSTGKVLVGKKTRKSLKSLTAEYPSSKSSATNRVPKCARCRNHGWISELRGHKKHCTYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVSTKTGQEMDSLPPGNIFDLAENLQNSETANASQQEAVEDLSLNNKQAACLQTISRSNSEEGSIDKSSKGTLLSNITITSSNRSCLPDARVSQNAIDMLAQLFPKRKRSILELVLRRCDSDLVKAIENISNSYKEPQGEIENRIEHGAANVIKSAFKPVHSSANVNSKPLTLGSSVCSTTTAYPKWFVPLTFPITFQGHLASALPPTSIPPLTARCTLPNCTCLESYQFNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -