Olae015774.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orius laevigatus
Gene Symbol
-
Assembly
GCA_018703685.1
Location
JAGWEN010000389.1:94832-102132[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 1 61 4.4 1.5 1 11 21 31 21 34 0.91
2 26 1 61 4.4 0.2 9 23 57 71 56 71 0.92
3 26 3e-06 0.00018 21.8 1.7 1 23 77 99 77 99 0.99
4 26 4.2e-07 2.6e-05 24.4 1.3 1 23 105 127 105 127 0.99
5 26 0.00022 0.014 15.9 2.4 1 23 133 155 133 155 0.99
6 26 6.5e-06 0.00039 20.7 0.5 1 23 161 183 161 183 0.98
7 26 1.4e-05 0.00083 19.7 1.0 1 23 189 211 189 211 0.98
8 26 5.6e-05 0.0034 17.8 0.3 1 23 217 239 217 239 0.99
9 26 9.2e-08 5.6e-06 26.5 0.8 1 23 245 267 245 267 0.99
10 26 4.5e-07 2.7e-05 24.4 0.8 1 23 273 295 273 295 0.99
11 26 3.2e-06 0.00019 21.7 3.3 1 23 301 323 301 323 0.98
12 26 0.00036 0.022 15.2 0.1 1 23 329 351 329 351 0.92
13 26 0.00024 0.014 15.8 0.5 1 23 373 395 373 395 0.98
14 26 6.7e-07 4.1e-05 23.8 0.5 1 23 401 423 401 423 0.97
15 26 4.5e-05 0.0027 18.1 0.7 1 23 429 451 429 451 0.98
16 26 8.6e-05 0.0052 17.2 0.3 1 19 457 475 457 479 0.95
17 26 0.00011 0.0067 16.8 0.1 1 23 485 507 485 507 0.98
18 26 0.00023 0.014 15.9 1.8 1 23 513 535 513 535 0.98
19 26 0.3 18 6.0 1.2 1 12 541 552 541 567 0.93
20 26 1.7e-06 0.00011 22.5 2.2 1 23 578 600 578 600 0.99
21 26 8e-07 4.8e-05 23.6 3.0 1 23 606 628 606 628 0.99
22 26 3.1e-07 1.9e-05 24.9 1.0 1 23 634 656 634 656 0.99
23 26 0.00016 0.0098 16.3 0.2 1 23 662 684 662 684 0.99
24 26 5.8e-06 0.00035 20.9 1.4 1 23 690 712 690 712 0.99
25 26 1.1e-05 0.00067 20.0 0.1 1 23 718 740 718 740 0.99
26 26 0.011 0.65 10.6 0.1 1 17 746 762 746 763 0.94

Sequence Information

Coding Sequence
ATGTTTCCGTATTTAAGCATTTTGAAAATTCATAATAGGACCCACACAGGAGAGAAGCCATATAAATGTGAGACCTGCGATGCTACATTCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTGCATTCACCGAGTCATGCTATTTGAAAAGGCACAGTAGGACCCACACCGGAGAGAAGCCATTTAAATGTGATATCTGCGATACCAGGTTTGGGCATTCAAGCGGTTTAATAAAGCATCGTAGGATCCACACAGGAGAGAAGCCATACAAATGTGATATCTGCGGTGCTAAATTCACCCTGTCAAGCAATTTAAAAAGGCATAATAGGACCCACACTGGAGAGAAGCCATATAAATGTGATATCTGTGAAGCTGCATTCAACGAGTCATGCTATTTGAAAAGGCACAGTAGGACCCACACCGGAGAGAAGCCATATAAATGTGATATCTGTGATGCCATGTTTGCGCATTCAAGCGGTTTAATAAAGCATAATAGGATCCACACAGGAGAGAAGCCATATAAATGTGATATATGCGATGCCACTTTCTCCCAGTTAAAAGGTTTAAAAAGGCATAATACGACCCACACAGGAGAGAAGCCATATAAATGTGATTTCTGCGAAGCTGCATTCACCTTGCCGGGCGATTTAAAAAGGCATAATAGGACCCATTCAGGAGAGAGGCCATATAAATGTGATATCTGCGATGCTACATTCACCGACTCAGGTAATTTAAAAAGGCATAATAGGACCCACACAGGAGAGAGGCCATATAAATGTGATATCTGCGAAGCTACATTCACCGATTCAGGCAATTTGAAAAAGCATAATAGGACCCACACAGGAGAGAAGCCATATAGATGTGATATCTGCGATAAAACATTCACCTTGCCATGCAATTTGAAAAAGCATAAGAGGGCACACACCGGAGAGAAGCCATATAAATGTGATATCTGCGATGCCACTTTCACCGAGTCGGGTAGTTTAGAAGAGCATAATGGGATCCACACCGGAGAGAAGCCATATAAATGGGATATCTCCAATGCCAAGATCCACACAGGAGAGGAGCCATATAAATGTGATGTCTGCAATGATACATTCACCGCGTCAGGAGATTTGAAAAGGCATAATAGGATCCACACAGGAAAGAAGCAATATAAATGTGATATATGCGATGTCACTTTCACCCGGTCAAGCAGTTTGAAAGCGCATAATATGATCCACACAGGAGAGAAGCCACATAAATGTGACATCTGCGAAGCTGCATTCGCCACGTCAGGCTATTTGAAAAAGCATAATAGGATCCACAGAGGAGAAAAGCCATATAAATGTGATATCTGCGATGCTTCATTCACCGTGCCAAGCAGTTTGAAATCTCATAATTGGACCCACAAAGTGGAGAAGCCATATAAATGTGATATCTGCGATGCCATGTTTGCGTTTCCAAGTGTTTTGAAAAGCCACATTTATTCTCATACTGGAGAGAAGCCATATAAATGTGATTTCTGCGAAGCTGCATTCACCATTTCGCACGATTTAAAAAGGCATTATAGGGCCCACACAGGAGAGAAGCCATATAAATGTGATAACTGCGATGCTACATTCAGCCGTGATATATGCGATGCTACATTCAGCGCATCTGGTCATTTGACGAGGCTTAATAGGATCCACACAGGAGAGAAGCCATATAAATGTGATATCTGCAATGCAACGTTCACGCAGTCAGGCCATTTGAAAATTCATAATAGGACCCACACAGGAGAGAAGCCATTTAAATGTGATATCTGCGATGCAACGTTCACGCAGTCAGGCCATTTGAAAAAGCATAATAGGACCCACACAGGAGAGAAGCCATTTAAATGTGATATCTGCGATGCAACGTTCACGCAGTCAGGCAATTTGAAAAATCATAATAGGACCCACACAGGAGAGAAGCCATATAAATGTGATAACTGCGAAGCTGCATTCACCGAGTCAGGCCCTTTGAAAAGGCATAAAAGGATCCACACAGGAGAGAAGCCATTTAAATGTGATATCTGCGATGCTACATTCATCGGCTCAGGGCATTTGAAAAGGCATAATAGGACCCACACAGGAGAGAAGCCATATAAATGTGATATCTGCGATGCTACATTCATCGGCTCAGGGGATTTGAAAGCTCATAATAGGACCCACACAGGAGAGAAGCCATATAAATGTGATATCTGCGATGCAACGTTCACTGCGTCAGGCCATTTGAAAATCATAATAGGACCCACACAGGAGAGAAGCCATATAAATGTGATATCTGCAATGCAACGTTCACGCATACATCGACTATACCTTCCGGCTTCTGATGGAGAAGAAAATGAATATCCTCATCCAAGTTCCGAATGCGAAGATAAAGTCCTTCATACTGTACACACAGTTAGAGCGATCTCGACAAACGTTTGCAAAAGCATTTACAGATCTTTGAGTCAACACTACTCCAAAAGAAGAGCTGCAAGTCCTTTCTCAACAAGCTCATCAAACCCAGATTCATTATCGACTGAATCAACCGATGATGAAACCACCGATAGCAACTAA
Protein Sequence
MFPYLSILKIHNRTHTGEKPYKCETCDATFTXXXXXXXXXXXXXXXXXXXXXXXXAAFTESCYLKRHSRTHTGEKPFKCDICDTRFGHSSGLIKHRRIHTGEKPYKCDICGAKFTLSSNLKRHNRTHTGEKPYKCDICEAAFNESCYLKRHSRTHTGEKPYKCDICDAMFAHSSGLIKHNRIHTGEKPYKCDICDATFSQLKGLKRHNTTHTGEKPYKCDFCEAAFTLPGDLKRHNRTHSGERPYKCDICDATFTDSGNLKRHNRTHTGERPYKCDICEATFTDSGNLKKHNRTHTGEKPYRCDICDKTFTLPCNLKKHKRAHTGEKPYKCDICDATFTESGSLEEHNGIHTGEKPYKWDISNAKIHTGEEPYKCDVCNDTFTASGDLKRHNRIHTGKKQYKCDICDVTFTRSSSLKAHNMIHTGEKPHKCDICEAAFATSGYLKKHNRIHRGEKPYKCDICDASFTVPSSLKSHNWTHKVEKPYKCDICDAMFAFPSVLKSHIYSHTGEKPYKCDFCEAAFTISHDLKRHYRAHTGEKPYKCDNCDATFSRDICDATFSASGHLTRLNRIHTGEKPYKCDICNATFTQSGHLKIHNRTHTGEKPFKCDICDATFTQSGHLKKHNRTHTGEKPFKCDICDATFTQSGNLKNHNRTHTGEKPYKCDNCEAAFTESGPLKRHKRIHTGEKPFKCDICDATFIGSGHLKRHNRTHTGEKPYKCDICDATFIGSGDLKAHNRTHTGEKPYKCDICDATFTASGHLKIIIGPTQERSHINVISAMQRSRIHRLYLPASDGEENEYPHPSSECEDKVLHTVHTVRAISTNVCKSIYRSLSQHYSKRRAASPFSTSSSNPDSLSTESTDDETTDSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01108966;
90% Identity
iTF_01108966;
80% Identity
iTF_01108966;