Olae006093.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- -
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010000183.1:117699-133409[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-15 9.3e-11 41.7 3.0 4 147 42 187 41 229 0.59 2 2 3.3e-06 0.059 12.6 0.0 346 382 247 285 228 303 0.77
Sequence Information
- Coding Sequence
- ATGGACCGAGTGATTTCAAGTCCTCAAGATAAACTGCCTTCCCTTTATTCTTTCATGCGTGGAAAACTTATGGCTTCATACAATGGCGCTTTTCATGTCAATGATTCCGGAAGTGCCTGCGTGGAGCGGGACCGGCTTCGCGAGCGGGAGCGGCAGGCCAGGGCTCAGATGTCCTCAGCCTCTGAACGCGAGGACCCTCCTTCTGGCACTCCACTTTTTGGTGCCATAGTCCGGGTTCATCCATCTCCTGGAGACCGGGTAAAGCAGAACATTCAAAGTACACTCGGAGAGTACGATAAAGTAAAGCACCTTCTTGAGGAACCGAAGCAGCTGCTTGGTTTCGACGGATTGCCTCCCGCGTCGCCAGCTCCGGCTCCTATTTGCAGCACGAAACCTTCCCAGTCGAGACCTCACGAGTTCAAAAAGCCGCCATCTTCCCATTTGAGTTCGAACTCAAGGCCATCGCATCACGTTCAATCGTCTTCAGCTTCCAGAAACTCATTCGCAAAACCTGCCGATGGTAAGCCAACGTACAATTCGAGTAGTTCAGCGAGAGCCTATTATGGCCCACCTGGGAAACAACATTCGGTCGAGCATAGATCCAACGGAGTCGGAGGAGCTCAGAAAAATCCCCCATCAGGTCATCATGGGAGGATTCCTTCCAGAAACCCTAACCGCCTCCATTTGGACATTCCACCACCGACCAAAGATTCTACGAGACAAGGGGTAGGCCTTCCTAATAATGACGTTGAGAACATTCTTAAGGAAATGACTGAATTCAACGTCATGACACCTTTGACAGCAATTGCCTCAACACCTCGCAAAGAAGTAGATTCTAAATACAATTTTAACATCGATTTATTTCAACAGGATCAGCGGCAAGAACCACCAAAGTCTTCTTTGCAAACCATTGACCTTACTGGGCCTGTTACGATCAATTTATTGTCTCCTCCAAGACCGGAATCTCCACCTCCTCTACCCCTGTCGCCACCTCCAGCTACACCTTGCCCTGCCAAAAACTGTAAGTAG
- Protein Sequence
- MDRVISSPQDKLPSLYSFMRGKLMASYNGAFHVNDSGSACVERDRLRERERQARAQMSSASEREDPPSGTPLFGAIVRVHPSPGDRVKQNIQSTLGEYDKVKHLLEEPKQLLGFDGLPPASPAPAPICSTKPSQSRPHEFKKPPSSHLSSNSRPSHHVQSSSASRNSFAKPADGKPTYNSSSSARAYYGPPGKQHSVEHRSNGVGGAQKNPPSGHHGRIPSRNPNRLHLDIPPPTKDSTRQGVGLPNNDVENILKEMTEFNVMTPLTAIASTPRKEVDSKYNFNIDLFQQDQRQEPPKSSLQTIDLTGPVTINLLSPPRPESPPPLPLSPPPATPCPAKNCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -