Orus045315.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orchestes rusci
Gene Symbol
-
Assembly
GCA_958502075.1
Location
OY293311.1:28690546-28721597[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.1e-06 0.00018 23.3 1.2 1 23 58 81 58 81 0.98
2 16 0.00016 0.026 16.5 1.1 1 23 88 111 88 111 0.96
3 16 0.00078 0.13 14.4 1.6 1 23 171 194 171 194 0.97
4 16 0.00015 0.025 16.6 4.8 1 23 201 224 201 224 0.97
5 16 0.0041 0.65 12.1 5.2 1 23 231 254 231 254 0.97
6 16 6.2e-07 0.0001 24.1 1.6 1 23 305 328 305 328 0.97
7 16 0.00021 0.034 16.2 1.4 2 23 336 358 335 358 0.95
8 16 0.00044 0.071 15.2 1.2 2 21 418 437 417 447 0.94
9 16 1.2e-06 0.0002 23.2 2.0 1 23 449 472 449 472 0.97
10 16 0.33 53 6.1 1.3 2 23 476 498 475 498 0.91
11 16 0.0092 1.5 11.0 0.8 2 23 506 528 505 528 0.91
12 16 0.00038 0.062 15.4 5.2 1 23 531 554 531 554 0.97
13 16 0.00041 0.066 15.3 1.2 1 23 601 624 601 624 0.96
14 16 0.002 0.33 13.1 2.6 3 23 638 659 636 659 0.90
15 16 0.75 1.2e+02 5.0 0.1 5 23 708 727 706 727 0.92
16 16 0.00026 0.042 15.9 1.5 1 23 776 799 776 799 0.96

Sequence Information

Coding Sequence
ATGAACTTCAATGAAGTAATTAAAACCTTTTTCAGAATAACATCAAATAAagaactgaaaaatattttggaaaacattaAAGAAGAGGAACCACTCAACATTAAAGAAGAAACACTGGACTTGAATGATGATGAAACGCAATTCGAAAAAATCCTCAACGACCAAGCAGGATTCAAGTGTGATATCTGTAATAGAGCTTTCAAGCTAAAAACCAATCTTAGCAGACATGTCAGAACAGTTCACTCAACTGTGAAGGAAAGTTTCAACTGTGAACTATGCGACAAAACTTTCCTGGATAGATACTACTTGCAAAAGCATATCGAAAGACTACATCAGCCCAGTCTTGAACGGATTaaatgcgagCCAACAACATATCATATAATATGTGAAGAAGCTCAAAATATCCTGGGAGATATCAAAAAAGAAGAATCACttgacattaaagaagaaacACTGGACTTTAATGATGATGAAACGCAATTCGAAAAAATACTCAACGACCAAGCAGGATTCACGTGTGATTTATGTAAAGAATCTTTTATGCTGAAAACCAATTTTACCAGACATGTCACAACAGTCCACGCAAATGTCAATAGAAGTTTCaactgtgaattttgcgacaagacttaCAAGGATAAACGCTGCTTGCAACAGCATGTTAGAAGACTACATCCACCTTTTCCTGAACTATTcaaatgcgagttttgtgacaagtcctTTAAGTGTAAGAACGGTCTTAGGCAACATGTCAAGTCTCAGCATTCAGACCTTTTAAGGCTCTATCCAATCAAACATGAACCCACGTATGATCCGGAAACTCACATAAAAGAAGAACCACTAGACATTAAAGATGAACCAATGGACTTGATTGATGAAACTCAACTCGAAGAAATTCTTAGCGACATAGCAAGATTCAACTGTGATCTCTGTGATAAATCTTTCAGGTTCAGCAGCAATCTTAGCAGACATGTCAAAACAGTCCACTCGACTGAAAATGAAAGGTTAAGCTGTGAATTTTGCTACAGGACTTTCAAGTATAAAGACTACTTGAGAGTCCATGTTAAAAAAGCACATCAGCCTATTCTTGAGCGatTCACACCTATCTGGATCAAAAAAGAGGACATTTCTGATTATGAGGAAACGAAAATAGGCATCAAAGAGGAACCACTTGATGAAGCAGATCTTGTCGACGTCAATAATCTGAAAAACGTTATAACGGAGCGTCCTTTTGGAGAAGACGATGACATAATCAAATGTAATTTGTGTGACAAATCCTTCAACAACATTAGGAATTTCAATGAGCATATTACAATGTCTAACactcatcagaaagtcaatcaCAGATACAATTGTGATTTCTGTGACAAGTCTTTCAAGTATAAGTCTGGCTTGAATGCTCACATCAAAAAGCGACATTCGAACAGTAAATGCATCTACTGTGATCAGCAATTTGAAGACTACGATTGCTTGTTTGAACATGTCAAGGAACAACATCGGAGCTGTCGTGATGAACTAGAGTGTGAGCATTGCAATCAACTATTTGATGATCAGAATGATTTGAGCCATCATGTCGAGGCAGTACATAGAAGATTTCATTGTCATTCTTGTGATAAGTCCTTCAAGGACAAGGGATATTTGGACTTACATGTTAAGACCACACATTTGGACATCAACGAGTTCAGGCAAATGAAACAGAAACAAATTGACGACACTGACGAACCACTTTATATTGAGGAGGAAGCTTTGGAAACCATCAATATAAGCGATGATGAAGAGAAAATTGGGAAGACCGAAAACGACTTCAAGTGTGATTATTGTTATAAATCTttcaaattcatcaataacCTTGAGGGACATGTTCTGATGAATCACTCAAAAATCGACTATGTCTCTGAGAAGTCAAACATCAAATGCATCTTCTGTGACAGATCTTTCAAGTATTCACATTCCTTGCAAAAACACGTTGATACATACCATTCGAGCAACGATGACCTGAGacaaatgaaaCAAGAGCAAATTGACGTCACTGAGGAGCCACTGTTTATAAAAGAAGAAACGTTGGTTGATGATTCGTCACAAAGCCAATCAGAGCATGAAGTGAAGATCGAAAAGTCAAACATCCAATGTGACAACCCTTTCAAGTACCTCAAATCCTTGCAAGAGCACGTTGATAAATATCATTCGAGCAACGATGACTCCAGACAAATGGAACAAGAACAAATCGACGTCACTGAGGAACCACTATTTATAAAGGAGGAAACGTTGATTGATGATTCACAAAGCCAATCACAGCATGAAGTGAAGATTGAAAAGACCGAAAATTATTTTAAGTGTGACCATTGTGAAAAATCcttcaaattcatcaataacCTGGAGGGGCATGTTTTGATCAATCATCCAAAAGTCGATAAGTATCACAAGAAGATGTAA
Protein Sequence
MNFNEVIKTFFRITSNKELKNILENIKEEEPLNIKEETLDLNDDETQFEKILNDQAGFKCDICNRAFKLKTNLSRHVRTVHSTVKESFNCELCDKTFLDRYYLQKHIERLHQPSLERIKCEPTTYHIICEEAQNILGDIKKEESLDIKEETLDFNDDETQFEKILNDQAGFTCDLCKESFMLKTNFTRHVTTVHANVNRSFNCEFCDKTYKDKRCLQQHVRRLHPPFPELFKCEFCDKSFKCKNGLRQHVKSQHSDLLRLYPIKHEPTYDPETHIKEEPLDIKDEPMDLIDETQLEEILSDIARFNCDLCDKSFRFSSNLSRHVKTVHSTENERLSCEFCYRTFKYKDYLRVHVKKAHQPILERFTPIWIKKEDISDYEETKIGIKEEPLDEADLVDVNNLKNVITERPFGEDDDIIKCNLCDKSFNNIRNFNEHITMSNTHQKVNHRYNCDFCDKSFKYKSGLNAHIKKRHSNSKCIYCDQQFEDYDCLFEHVKEQHRSCRDELECEHCNQLFDDQNDLSHHVEAVHRRFHCHSCDKSFKDKGYLDLHVKTTHLDINEFRQMKQKQIDDTDEPLYIEEEALETINISDDEEKIGKTENDFKCDYCYKSFKFINNLEGHVLMNHSKIDYVSEKSNIKCIFCDRSFKYSHSLQKHVDTYHSSNDDLRQMKQEQIDVTEEPLFIKEETLVDDSSQSQSEHEVKIEKSNIQCDNPFKYLKSLQEHVDKYHSSNDDSRQMEQEQIDVTEEPLFIKEETLIDDSQSQSQHEVKIEKTENYFKCDHCEKSFKFINNLEGHVLINHPKVDKYHKKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01107750;
90% Identity
iTF_01107750;
80% Identity
iTF_01107750;