Basic Information

Insect: Orchestes rusci
Gene Symbol: -
Assembly: GCA_958502075.1
Location: OY293311.1:28690546-28721597[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.6e-05 0.18 13.5 0.2 18 44 59 82 48 82 0.91

2 14 3.7 6.9e+03 -1.2 0.2 18 26 89 97 85 112 0.64

3 14 0.045 82 4.9 0.0 18 43 172 194 161 195 0.89

4 14 0.00061 1.1 10.9 1.3 18 44 202 225 198 225 0.93

5 14 0.0012 2.1 10.0 1.0 18 44 232 255 229 255 0.94

6 14 0.0021 3.9 9.2 0.1 18 44 306 329 300 329 0.90

7 14 0.27 4.9e+02 2.5 0.3 17 44 335 359 330 359 0.83

8 14 0.0038 7 8.4 0.6 13 39 413 436 405 448 0.81

9 14 0.0013 2.4 9.8 1.3 17 44 449 473 439 473 0.89

10 14 0.012 22 6.8 0.5 13 44 471 499 469 499 0.88

11 14 4.6 8.5e+03 -1.5 2.4 18 43 506 528 500 533 0.72

12 14 0.1 1.9e+02 3.8 0.0 13 43 597 624 589 625 0.78

13 14 0.0033 6 8.6 0.5 14 43 633 659 628 660 0.81

14 14 0.0042 7.7 8.2 0.6 9 43 768 799 764 800 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.6e-05	0.18	13.5	0.2	18	44	59	82	48	82	0.91
2	14	3.7	6.9e+03	-1.2	0.2	18	26	89	97	85	112	0.64
3	14	0.045	82	4.9	0.0	18	43	172	194	161	195	0.89
4	14	0.00061	1.1	10.9	1.3	18	44	202	225	198	225	0.93
5	14	0.0012	2.1	10.0	1.0	18	44	232	255	229	255	0.94
6	14	0.0021	3.9	9.2	0.1	18	44	306	329	300	329	0.90
7	14	0.27	4.9e+02	2.5	0.3	17	44	335	359	330	359	0.83
8	14	0.0038	7	8.4	0.6	13	39	413	436	405	448	0.81
9	14	0.0013	2.4	9.8	1.3	17	44	449	473	439	473	0.89
10	14	0.012	22	6.8	0.5	13	44	471	499	469	499	0.88
11	14	4.6	8.5e+03	-1.5	2.4	18	43	506	528	500	533	0.72
12	14	0.1	1.9e+02	3.8	0.0	13	43	597	624	589	625	0.78
13	14	0.0033	6	8.6	0.5	14	43	633	659	628	660	0.81
14	14	0.0042	7.7	8.2	0.6	9	43	768	799	764	800	0.79

Sequence Information

Coding Sequence: ATGAACTTCAATGAAGTAATTAAAACCTTTTTCAGAATAACATCAAATAAagaactgaaaaatattttggaaaacattaAAGAAGAGGAACCACTCAACATTAAAGAAGAAACACTGGACTTGAATGATGATGAAACGCAATTCGAAAAAATCCTCAACGACCAAGCAGGATTCAAGTGTGATATCTGTAATAGAGCTTTCAAGCTAAAAACCAATCTTAGCAGACATGTCAGAACAGTTCACTCAACTGTGAAGGAAAGTTTCAACTGTGAACTATGCGACAAAACTTTCCTGGATAGATACTACTTGCAAAAGCATATCGAAAGACTACATCAGCCCAGTCTTGAACGGATTaaatgcgagCCAACAACATATCATATAATATGTGAAGAAGCTCAAAATATCCTGGGAGATATCAAAAAAGAAGAATCACttgacattaaagaagaaacACTGGACTTTAATGATGATGAAACGCAATTCGAAAAAATACTCAACGACCAAGCAGGATTCACGTGTGATTTATGTAAAGAATCTTTTATGCTGAAAACCAATTTTACCAGACATGTCACAACAGTCCACGCAAATGTCAATAGAAGTTTCaactgtgaattttgcgacaagacttaCAAGGATAAACGCTGCTTGCAACAGCATGTTAGAAGACTACATCCACCTTTTCCTGAACTATTcaaatgcgagttttgtgacaagtcctTTAAGTGTAAGAACGGTCTTAGGCAACATGTCAAGTCTCAGCATTCAGACCTTTTAAGGCTCTATCCAATCAAACATGAACCCACGTATGATCCGGAAACTCACATAAAAGAAGAACCACTAGACATTAAAGATGAACCAATGGACTTGATTGATGAAACTCAACTCGAAGAAATTCTTAGCGACATAGCAAGATTCAACTGTGATCTCTGTGATAAATCTTTCAGGTTCAGCAGCAATCTTAGCAGACATGTCAAAACAGTCCACTCGACTGAAAATGAAAGGTTAAGCTGTGAATTTTGCTACAGGACTTTCAAGTATAAAGACTACTTGAGAGTCCATGTTAAAAAAGCACATCAGCCTATTCTTGAGCGatTCACACCTATCTGGATCAAAAAAGAGGACATTTCTGATTATGAGGAAACGAAAATAGGCATCAAAGAGGAACCACTTGATGAAGCAGATCTTGTCGACGTCAATAATCTGAAAAACGTTATAACGGAGCGTCCTTTTGGAGAAGACGATGACATAATCAAATGTAATTTGTGTGACAAATCCTTCAACAACATTAGGAATTTCAATGAGCATATTACAATGTCTAACactcatcagaaagtcaatcaCAGATACAATTGTGATTTCTGTGACAAGTCTTTCAAGTATAAGTCTGGCTTGAATGCTCACATCAAAAAGCGACATTCGAACAGTAAATGCATCTACTGTGATCAGCAATTTGAAGACTACGATTGCTTGTTTGAACATGTCAAGGAACAACATCGGAGCTGTCGTGATGAACTAGAGTGTGAGCATTGCAATCAACTATTTGATGATCAGAATGATTTGAGCCATCATGTCGAGGCAGTACATAGAAGATTTCATTGTCATTCTTGTGATAAGTCCTTCAAGGACAAGGGATATTTGGACTTACATGTTAAGACCACACATTTGGACATCAACGAGTTCAGGCAAATGAAACAGAAACAAATTGACGACACTGACGAACCACTTTATATTGAGGAGGAAGCTTTGGAAACCATCAATATAAGCGATGATGAAGAGAAAATTGGGAAGACCGAAAACGACTTCAAGTGTGATTATTGTTATAAATCTttcaaattcatcaataacCTTGAGGGACATGTTCTGATGAATCACTCAAAAATCGACTATGTCTCTGAGAAGTCAAACATCAAATGCATCTTCTGTGACAGATCTTTCAAGTATTCACATTCCTTGCAAAAACACGTTGATACATACCATTCGAGCAACGATGACCTGAGacaaatgaaaCAAGAGCAAATTGACGTCACTGAGGAGCCACTGTTTATAAAAGAAGAAACGTTGGTTGATGATTCGTCACAAAGCCAATCAGAGCATGAAGTGAAGATCGAAAAGTCAAACATCCAATGTGACAACCCTTTCAAGTACCTCAAATCCTTGCAAGAGCACGTTGATAAATATCATTCGAGCAACGATGACTCCAGACAAATGGAACAAGAACAAATCGACGTCACTGAGGAACCACTATTTATAAAGGAGGAAACGTTGATTGATGATTCACAAAGCCAATCACAGCATGAAGTGAAGATTGAAAAGACCGAAAATTATTTTAAGTGTGACCATTGTGAAAAATCcttcaaattcatcaataacCTGGAGGGGCATGTTTTGATCAATCATCCAAAAGTCGATAAGTATCACAAGAAGATGTAA
Protein Sequence: MNFNEVIKTFFRITSNKELKNILENIKEEEPLNIKEETLDLNDDETQFEKILNDQAGFKCDICNRAFKLKTNLSRHVRTVHSTVKESFNCELCDKTFLDRYYLQKHIERLHQPSLERIKCEPTTYHIICEEAQNILGDIKKEESLDIKEETLDFNDDETQFEKILNDQAGFTCDLCKESFMLKTNFTRHVTTVHANVNRSFNCEFCDKTYKDKRCLQQHVRRLHPPFPELFKCEFCDKSFKCKNGLRQHVKSQHSDLLRLYPIKHEPTYDPETHIKEEPLDIKDEPMDLIDETQLEEILSDIARFNCDLCDKSFRFSSNLSRHVKTVHSTENERLSCEFCYRTFKYKDYLRVHVKKAHQPILERFTPIWIKKEDISDYEETKIGIKEEPLDEADLVDVNNLKNVITERPFGEDDDIIKCNLCDKSFNNIRNFNEHITMSNTHQKVNHRYNCDFCDKSFKYKSGLNAHIKKRHSNSKCIYCDQQFEDYDCLFEHVKEQHRSCRDELECEHCNQLFDDQNDLSHHVEAVHRRFHCHSCDKSFKDKGYLDLHVKTTHLDINEFRQMKQKQIDDTDEPLYIEEEALETINISDDEEKIGKTENDFKCDYCYKSFKFINNLEGHVLMNHSKIDYVSEKSNIKCIFCDRSFKYSHSLQKHVDTYHSSNDDLRQMKQEQIDVTEEPLFIKEETLVDDSSQSQSEHEVKIEKSNIQCDNPFKYLKSLQEHVDKYHSSNDDSRQMEQEQIDVTEEPLFIKEETLIDDSQSQSQHEVKIEKTENYFKCDHCEKSFKFINNLEGHVLINHPKVDKYHKKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01107809;
90% Identity: iTF_01107809;
80% Identity: iTF_01107809;