Orus045313.1
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- -
- Assembly
- GCA_958502075.1
- Location
- OY293311.1:28639704-28649481[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.3 5.5e+02 2.3 0.3 15 38 35 55 29 61 0.75 2 13 0.0029 5.3 8.8 4.1 18 44 68 91 65 91 0.94 3 13 0.59 1.1e+03 1.3 0.5 19 44 98 120 96 120 0.83 4 13 1.2 2.2e+03 0.4 2.3 10 27 119 136 109 139 0.69 5 13 0.00019 0.35 12.5 4.0 11 43 199 228 194 229 0.87 6 13 0.032 59 5.4 5.5 14 44 232 259 227 259 0.90 7 13 0.38 7e+02 2.0 0.3 15 43 310 335 304 336 0.78 8 13 0.025 46 5.7 0.8 18 44 343 366 337 366 0.93 9 13 0.0023 4.3 9.1 1.2 18 44 372 395 367 395 0.88 10 13 1.6e-05 0.029 16.0 0.8 18 44 402 425 397 425 0.94 11 13 0.0075 14 7.4 2.7 17 44 431 454 428 454 0.92 12 13 0.061 1.1e+02 4.5 5.1 8 28 450 471 447 483 0.69 13 13 2.1e-05 0.039 15.6 2.7 10 44 482 513 474 513 0.90
Sequence Information
- Coding Sequence
- ATGGTGGAAATGTCCGTCAATTGGATCAAGCAAGAACTCATCAAGAACGAAGATGATGTGGTAAAACCAGAACTATCGATGGGTTATTATGGCaaacaaatagaaaaatatgtttGTGAGGTTTGTAATAAGCCCTTCAAACAGCTGAAAAATTTGCGCTTGCATTCAAAGATGCAGCACTTGGATATTACGGTCCTGCACACGTGTACCATCTGTCACAAGGGTTTCAAGTACAAAAATAGTTTGGACAGACATATCAAGACGATGCATTCCAATAACGAACTTTTCATGTGTTTCAATTGTGATGCCTCTTTTAAGTACAAGAGAACTTTGAAGAAGCACGTTAACGAAAAGCATTCGGAAATCAGGGAAACTTTCAAGTGTGCCTTCTGTGACAAAATTAGTTCTATTGTACTTCACATATTTGCTGAAGATGCTAAAGATGTTCGTTCTGATCAACAATTGACTTGTGAAACTGAAATCATCATTTCCAGTTTCCTCACCAAGTGGATCAAAGAAGAGGAAATTGATGATATTCCTGATCTATTGAACATTGAAgacatcaaaaaagaaaaagaatcaTCATCAGACACGATAAAACAAAGTAACAAGTTCAAATGTAACTTATGTGACAAGTTATTCACGCGTAAGAACAACTTAAATCATCACATCAAGGTTCTGCATAATGAATATCACGATAAATTCAAATGTACTCTGTGTAATAGAGGCTTCACACATAAAGTCAATCTGCGCAGGCATATGGAGCTTAAGCATTCGGAGAGTCAACCAATCAAATGCGAGTCCATAGACTTGGTCAAGCATGAACTCATCAAAAATGAAGACGATGTGGTAAAATCAGAACTATTGGAGTTTGAGGATAATAAACAAGAAACCATGGACGTAGCGGGTTATTATGGCGAACaaatggaaaaatatgtttgtgCGGTTTGTGAGAAGCCCTTCAAACAGCTGCAACATTTGCGTATTCATATAAAGATGCAGCACTCGAATAATTTAGTCCTGCACAAGTGTACGCTCTGTGATAAGGGTTTCCAGTACAAAAGTAGTTTTAAACAACATATTAGGGTGGTGCATTCCGATATCAAacgatttaattgtttcaattgtGATGCTTCTTACAAGTCcaagaataatttgatgaaTCACGTCAAGACAAAACATTCGGATATCCAGGAAACTTTCCAGTGTGACTTCTGTGACAAAGTTTGTGATCGCAAGTCCAACTTGCGTCATCATGTTGAGCGACGACATCCGTACAACATTGAGGAAATCGAATGTGAATTTTGTCACAAGTCgttcagaaaaatcaatttgcaaAAACATGTCCAGCGGATGCATTCGGAAAAAAGTGAGATGGTACAGTGTGAAATCTGTAAAGAGACTTTGAGGAAGTTTGATTTGCAACGTCACGTCAGGTGGATGCATTCGGAAGATAACGATAAACTCAGATGTGTGATCTGCGACAGAGCCTTCACGCAAATGACTAATTTGCGTAGACATGTCAGAACCATGCACTCgcataaaataaatataatgtaA
- Protein Sequence
- MVEMSVNWIKQELIKNEDDVVKPELSMGYYGKQIEKYVCEVCNKPFKQLKNLRLHSKMQHLDITVLHTCTICHKGFKYKNSLDRHIKTMHSNNELFMCFNCDASFKYKRTLKKHVNEKHSEIRETFKCAFCDKISSIVLHIFAEDAKDVRSDQQLTCETEIIISSFLTKWIKEEEIDDIPDLLNIEDIKKEKESSSDTIKQSNKFKCNLCDKLFTRKNNLNHHIKVLHNEYHDKFKCTLCNRGFTHKVNLRRHMELKHSESQPIKCESIDLVKHELIKNEDDVVKSELLEFEDNKQETMDVAGYYGEQMEKYVCAVCEKPFKQLQHLRIHIKMQHSNNLVLHKCTLCDKGFQYKSSFKQHIRVVHSDIKRFNCFNCDASYKSKNNLMNHVKTKHSDIQETFQCDFCDKVCDRKSNLRHHVERRHPYNIEEIECEFCHKSFRKINLQKHVQRMHSEKSEMVQCEICKETLRKFDLQRHVRWMHSEDNDKLRCVICDRAFTQMTNLRRHVRTMHSHKINIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01108108;
- 90% Identity
- iTF_01108108;
- 80% Identity
- iTF_01108108;