Ocom027507.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- ZFHX3
- Assembly
- GCA_035357415.1
- Location
- CM068981.1:37756672-37769638[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.6 9.3e+02 3.0 0.3 1 23 48 71 48 71 0.88 2 15 0.082 30 7.7 0.3 2 23 89 111 88 111 0.93 3 15 0.047 17 8.5 2.7 2 22 188 208 188 211 0.90 4 15 0.12 43 7.2 1.5 3 23 225 248 223 248 0.87 5 15 0.0039 1.4 11.9 1.6 1 23 266 288 266 288 0.97 6 15 0.00084 0.3 14.0 0.7 2 23 295 317 294 317 0.94 7 15 0.00022 0.08 15.8 3.1 1 23 425 449 425 449 0.92 8 15 0.0066 2.4 11.2 0.6 1 22 469 490 469 493 0.89 9 15 0.0013 0.48 13.4 0.2 1 23 545 569 545 569 0.93 10 15 0.004 1.4 11.8 0.1 3 21 634 652 632 653 0.94 11 15 0.39 1.4e+02 5.6 2.5 2 19 793 810 792 815 0.90 12 15 0.00014 0.051 16.4 2.5 1 23 1381 1403 1381 1403 0.99 13 15 0.00096 0.35 13.8 0.3 1 23 1496 1518 1496 1518 0.98 14 15 0.0077 2.8 10.9 0.4 2 23 1669 1691 1668 1691 0.96 15 15 0.086 31 7.6 3.0 3 23 1951 1973 1949 1973 0.89
Sequence Information
- Coding Sequence
- ATGTTCTTTTATTCTCCAACAGAGCGAAGAGATAGTATCAATTTGGAACTATGTCAGATCGAAGCTAGTCGAGATCAAGTTAAAACCGAACCGCGAGAAGACAACGACGAGGCGAATAACAGCGAGATTGGAAATTCTCAACACATGTGCCCTTTCTGTGATTACACCAGCGATTCCGAGATGCGCATTCAAGCACACATACTCGGCCAGCACGGTCCAAATAACACACCGGCATCAGAACAGCAACAACAACAGCCTTCTATACACTGTCCTCTCTGTCAAGACATTTTTAAAGATCGAATATTATTGGAACGACACGTTATGCAAATACATTCGGTAAACAGCGAAGGTCTGCAACGTTTACTCATGCTTGTAGACCAAAGTCATTGGTTAAATCAAACGTCGAATAATTCAATCATTAATCAGACACCCAATCAAACGGTGTCGCCGAATTCAGTGTCTTCCAAAGAATCCAACAAGTTCGAGAAAACTGACATCAGCCAAAACGATGTCGATTTACTGTCTCCAAACAGCGACGATAACACCGAATCCGAATCCGAAAGATGCAGTACATGTTTCAGAACATTTCGCAATATTGACGAATTATGTTACCACCAAAACGAGACTGGACATTTAGAAATCAAACAAACTCCCAGCGGACCGGGTTATCTCTGTTGGAAAAAAGGTTGCAATCAATTTTTTCCGACCGCGCACACATTGCAAACGCATTTCAAAGAAGTTCACGCAAAAAATTCGATCGCTAATATGTCAGTATCGGAAAAGCACGTCTACAAATACAGATGTAATCAATGCTCGTTAGCTTTCAAAACGCTAGAGAAGCTGCAATTACATTCACAATATCATCTAATCAGAGATGCTACGAAATGCGTTTTATGCGGTAGAAGTTTCAGATCGCTCGTAGCTTTGCATAAACACGTAGAAAGCGTCCACTCGGAATTAACCGACGAAGAATTGAACGCTTACAAACAAAGTTTAATGAACAATCCTTTATTGTTAGCGGGATTGCAAGGACAAGTTCTAGACAGTTCGACCaacgatattttaaaaaaggaatCGTTACGTAACGAAGACGATTCCGTAGAATGCGATGACAATAAAGAACTAAATAGCAGCCAATCTTTGGAGGAAATTAATCAAAACGACGGCGAAAACTCGGAcgatagtataatttacaaggATCAACAATTTTTAGAAGATTACCTAAATAGTCAAGCGATAGCGGAAGATAGTTACAACGATCCCAATAGAAAATACAAATGCCATCGGTGTAAAGTTGCTTTTACCAGACAAAGCTATTTAACGGCTCACAATAAAACACTTTTACACAGAAAGGGGGAAAAACTCAGTTATCCCATGGAAAAATACTTAGATCCAAACAGACCTTATAAATGCGATGTTTGTAAGGAAAGTTTCACGCAGAAAAATATCCTACTCGTACATTACAATTCCGTTAGtcatttacataaattaaaaagagcAATGCAAGAACAACATcagaataacaataataataacccACCCGTATCGCCGGTAATGACGACAGGTGCTCAACCACAAAATCTAACACTAACTCCCAAAAGTACGTCTTCTGAGGAGGACGATAAAAAAAGATATCGGTGCAATATTTGCAAAGTAGCGTACACGCAAGGCAGTACTTTAGATATACACATGCGAAGCGTCTTACATCAAACGCGAGCTAGTAAATTACAAGATTTGGCATTGTCGGGTCAAATTGACCTGTCGAAACCACTGATAGAACAACCCGAAGCAGCCATGCAGTCTCCTAAACAGAACAGTCCGGCACCGGGTAGTGGGGACAAACAACCCTCTCCGACCCCACCATCACCTGGGCTTTCAGGTAGTCAAGGCATTATGAATTGTTCAAAGTGCGGTGCGCTATTTAGTTCGCAAGATCAGTTGAGTGCTCATCAGCAACTGTATTGTATGTTCGCTACGCCTATGGCGATCTTTCAAGGGGCACACGAACCGAGTCAAGCAAAAACTCCACCCCCAAACGACAATCCGGAAGGCGgtattaaagttaatattataCCGAAGAAGACCGGCTCGCACATGTATAAACATTTATTGGAAAGTTTCGGTTTCGATTTGGTTATGCAATACAACGAAAGCCATCAGCGAAGACAACGGCAACAACAACAACAGCAGCAACAAAGAGAAGCCGAAGAAAACGCCGCCGCCGCTGCCGCCAATGAAGTCCAGCAACAATCACCTCCGCCTCCAGTCCAGCTCGGTCCGGAGGAACCCGCCGGCGAGACGGCAGCAGTCACTGACGGCACCGACTCCAAGGCCGAGGAGGACACAGAAACCAACCTACCTGAAGTAAGTAAATCTACGTGCCAACATTGCAATAAAGAGTTCTCTAGTGTGTGGGTGTTAAAATCTCACTGTGAAGAAGTTCATAAAGATTTAGTGCCGCTAGAATTCTTAGAAAAATATGCTCAACAGTTCAAAACCGAATACGAAAAGAAAACTGTGGTGGTGACGGCGGCAACCTCTTCGACCCTCAACAGCATGCCAAGTGTATCGACTCCTGGTGCGACTACGCCTAGTTCCACACCCGCTGCTACTTCCAGTCCCACCGAAAACTCCACGCCGGAGAAGACGGACGAATCGAAAGAAGCTCTACACGCAAAACTGAATCTGCAAACTCCACCAGAAGCCACTTCGACCGCTCCCTCGACGCCGACGTCTTCTACGACGCCCGCCAGCAGTACCGACTCCTTGCCAGCGAATATCCAAGCCATGATTGCGCAAAGTATGGCACAAAACCCGGTGGCACTAGCTCAACAAATGTCCGAAATGCAAGCCGCCCTAAACGTGATGCAGCTTCAACAACTTAACTTTCCCATGATGCAGATGATGGGAATGGGTCTGCCGCTTGGTTTGAACGCCCTGGCCGCCATGAATCTACAACCGCCTCTCGTGCCCTTGATGATGCCACCTCCGCCGTTCGATCCCATCTCGCAATTCGGACCCCAAGATCAATCCGGCATGATGGCCAAACAACAAGCAATGATGCAACAGCAAGCGGTCGTCAGCGCAGCCGCTAATCAAAAACGTGCAAGAACAAGAATAACAGACGATCAACTAAAAATCTTACGCGCCCATTTCGACATCAACAATTCGCCGTCTGAAGATCAAATTCACGAGATGGCATCGCAAAGCGGTTTGCCGCCGAAAGTAATCAAACACTGGTTTAGAAATACGCTTTTTAAAGAGAGGCAACGCAACAAAGATAGTCCCTACAATTTTAACAATCCACCATCTACAACCCTTAACATTGAAGAATACGAAAAAACTGGCGAAGCAAAAGTAATGCCACTTAATAGTTCAGGAAGTAGTTCGGAtgacaataaatttaaagaatcCCCTAAACTTATCCagcaagaaataaaaaatgaattaaaagaagAACCAGTGGACGATTTTCCTAAAATAACCGAAGATAAACCGGAGCAGGTCGAAGAAAAaccaaatatatttaatttgccGCTTAGTTTACAACAAGCACAAAGTCCAGCGACTTCAGTTGCAAGTTCAGATAACCAGAGCGTTTCACAACCAACTACACCCAACAACCTAACCTTAACTTCGATAATTGCGTCTCAATTAGGAGATACTTTAACCACTAGTACTCCTACCATGAACATGACTAATATATCCTCCCATCACGGTCTGACCAGTCCCATGTTACCTCCACCCAAACTGAACCAACAAAATTTTCCTAATCCCAATAACCTCCAAGGAATACTACCTCTAACTCCTAACAGATGTTTAAGTCCTAGTAGAGACTACAGTAATCCTGGAAGTCAAGGATCAGGAGGATCGACTGGCAAAAGAGCAAATCGTACAAGGTTTACCGACTATCAAATCAAAGTATTGCAAGAATTTTTCGAAAATAACGCTTACCCGAAAGACGACGATCTCGAGTATCTTTCGAAATTACTTAACCTAAGTCCACGTGTAATCGTCGTATGGTTTCAAAATGCAAGACAAAAAGCTCGTAAAGTTTATGAAAACCAACCAGCAGCCGAACCAGCTCCCGGCATAGATGAATCTGGAGCTAATAGATTTCAAAGGACACCTGGATTGAACTAtcaatgtaaaaaatgtttattagtaTTTCAAAGATACTATGAATTAATTAGACATCAAAAAACACATTGTTTTAAAGAAGAAGACGCCAAACGATCGGCTCAAGCACAAGCTGCAGCCGCACAAATTGCAGCAGTCCTCAGTTCAGAAGATTCCAATTCCAGTACAACAGTTGAACAATCGCAACAACAACATCAGTTAAATCCACAATCTAATCTACCTTCACTACCTCAATCTAATCTCACTCAAAGTCCGAATCATCCGACAGCTTCAACTACTCCTACGCCTAGTCAAGGCAACTACCCTCCAACCTCACCATCGCCCTCTGAGTCGAAAGAAACTACGTTTCAATGCGATAAATGCAATTTAGTTTTTCCTCGATTTGAATTGTGGAGGGAACATCAACTTGTTCATTTAATGAACCCCAATCTTTTTCCATCTTACCCGCCCGATTCCCCTTTTGGGATTCTCCAGCAACATGCTCAACTTCAACAGTTAAACGTCAATTTGGGAGACCTCAACAAACAGCAAAACAACGTCGGTTCACAGCAGAATCTTCAACATCCTCTCATTAAcatgttaaataatgttgctGGACAAAAACGAAAAATTGACGAATTCGATGCCGAAAGCGATACGTCCGACCAACCTAAAGATAAGAGGCTGCGAACCACCATCCTGCCGGAACAATTAGATTATCTCtatcaaaaatatcaaattgaaagtaatcCATCCAGAAAGATGTTGGAAAATATTGCTAGAGAAGTGGGCTTAAAAAAGAGAGTAGTGCAAGTTTGGTTTCAAAATACACGCGCCCGAGAAAGAAAAGGCCAATTTCGAGCGCATGCTCAAGTTATAAACAAAAGGTGTCCTTTTTGTCCAGCACTATTCAAAGTTAAATCAGCTCTAGAGTCGCATTTAACCACAAAACATGCAGACCATTGCGCAAGAGGTGAAATTAATATCGATGCATTGCCAGATGAAGAAGCCAGTCTAGAATCAGCTCCTAGCTTAGTTTCCGGTGGAGGAGACAACAAAACTCAACAAAATTCCAACATGGTCCCTCCTCTTTTTCCATCCTTACATCCCGATATGGAAAACTCTATCAAAAAGTATTACGAAGAAAGCATGAAACGATATATCAGTGAATTGCAGGCACACGCTGCATCATCTAATGGCGATAAAAGCGAAATAAAGTCAGAGAAACCCGAAGGCGGTGAAATACCTCTAGATCTTTCCAAACCGGTCGACTTATCTCGACCGATGAAAGTATCTATGGACCATGAAAGAAATATTTGCGATCCTGGTCCATTAACTGATCTCAGCGAACGTTCTTTGTGTGACGAACGTAGCGACTCCATGTCGGAAACCACCGAATATTACGACGATGAAAGCAATCCCACTTCGCCGGCTAGCAGTACTCAAAGCAACactcaaaaacatttaaatagtaGTGGCTCACAGGCTGGGAATAAACGATATAGAACTCAAATGTCCTCGGTACAAGTTAAAGTAatgaaaattctttttaatgatTACAAAACGCCCACGATGGCAGAATGCGAGAATCTCGGCAAAGAAATCGGTTTACCAAAGCGTGTCATACAAGTTTGGTTCCAAAATGCTCGAGCCAAAGAGAAGAAAGGCAAGTTGGCTTTGCAGAAAGCCTTAGGCCAACCGGAAAACGACAACAATACAGTTCCTGATGACTGCAAGTATTGTAATTTCAAATACTCCCACAAATATTCTATTCAAGATCATATCTTCACCAAATCTCACATAAATAACGTGAAAGTGCATCTGGAGCATCAAAATAAAGACGTGGGATCAGAGAGCGAGTTTACCGTACCATCACTACCTGGTGCTTCCGGCACTGTTTCGGCCGATTCCACGACGAATCCACAACAGAATCTCAACAGCAACAACCACTACCAGCTGCTGCAAATGGCCGGCGTCCAAATGGGGAACGTCGCCAAAAACGAACAAGAAGAAGGTACAGAAAATTTGTTCCAGCAGTTCTACCAGCTTGGCAATAACGCGAATTATGGGGTTCAGAACCAGTACGTTCATCACGCGATGTTTGGTGCAAATGGTGAGTacctttttatttctaaattttccaCAGTGTAA
- Protein Sequence
- MFFYSPTERRDSINLELCQIEASRDQVKTEPREDNDEANNSEIGNSQHMCPFCDYTSDSEMRIQAHILGQHGPNNTPASEQQQQQPSIHCPLCQDIFKDRILLERHVMQIHSVNSEGLQRLLMLVDQSHWLNQTSNNSIINQTPNQTVSPNSVSSKESNKFEKTDISQNDVDLLSPNSDDNTESESERCSTCFRTFRNIDELCYHQNETGHLEIKQTPSGPGYLCWKKGCNQFFPTAHTLQTHFKEVHAKNSIANMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHLIRDATKCVLCGRSFRSLVALHKHVESVHSELTDEELNAYKQSLMNNPLLLAGLQGQVLDSSTNDILKKESLRNEDDSVECDDNKELNSSQSLEEINQNDGENSDDSIIYKDQQFLEDYLNSQAIAEDSYNDPNRKYKCHRCKVAFTRQSYLTAHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQHQNNNNNNPPVSPVMTTGAQPQNLTLTPKSTSSEEDDKKRYRCNICKVAYTQGSTLDIHMRSVLHQTRASKLQDLALSGQIDLSKPLIEQPEAAMQSPKQNSPAPGSGDKQPSPTPPSPGLSGSQGIMNCSKCGALFSSQDQLSAHQQLYCMFATPMAIFQGAHEPSQAKTPPPNDNPEGGIKVNIIPKKTGSHMYKHLLESFGFDLVMQYNESHQRRQRQQQQQQQQREAEENAAAAAANEVQQQSPPPPVQLGPEEPAGETAAVTDGTDSKAEEDTETNLPEVSKSTCQHCNKEFSSVWVLKSHCEEVHKDLVPLEFLEKYAQQFKTEYEKKTVVVTAATSSTLNSMPSVSTPGATTPSSTPAATSSPTENSTPEKTDESKEALHAKLNLQTPPEATSTAPSTPTSSTTPASSTDSLPANIQAMIAQSMAQNPVALAQQMSEMQAALNVMQLQQLNFPMMQMMGMGLPLGLNALAAMNLQPPLVPLMMPPPPFDPISQFGPQDQSGMMAKQQAMMQQQAVVSAAANQKRARTRITDDQLKILRAHFDINNSPSEDQIHEMASQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNIEEYEKTGEAKVMPLNSSGSSSDDNKFKESPKLIQQEIKNELKEEPVDDFPKITEDKPEQVEEKPNIFNLPLSLQQAQSPATSVASSDNQSVSQPTTPNNLTLTSIIASQLGDTLTTSTPTMNMTNISSHHGLTSPMLPPPKLNQQNFPNPNNLQGILPLTPNRCLSPSRDYSNPGSQGSGGSTGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLNLSPRVIVVWFQNARQKARKVYENQPAAEPAPGIDESGANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTTVEQSQQQHQLNPQSNLPSLPQSNLTQSPNHPTASTTPTPSQGNYPPTSPSPSESKETTFQCDKCNLVFPRFELWREHQLVHLMNPNLFPSYPPDSPFGILQQHAQLQQLNVNLGDLNKQQNNVGSQQNLQHPLINMLNNVAGQKRKIDEFDAESDTSDQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLTTKHADHCARGEINIDALPDEEASLESAPSLVSGGGDNKTQQNSNMVPPLFPSLHPDMENSIKKYYEESMKRYISELQAHAASSNGDKSEIKSEKPEGGEIPLDLSKPVDLSRPMKVSMDHERNICDPGPLTDLSERSLCDERSDSMSETTEYYDDESNPTSPASSTQSNTQKHLNSSGSQAGNKRYRTQMSSVQVKVMKILFNDYKTPTMAECENLGKEIGLPKRVIQVWFQNARAKEKKGKLALQKALGQPENDNNTVPDDCKYCNFKYSHKYSIQDHIFTKSHINNVKVHLEHQNKDVGSESEFTVPSLPGASGTVSADSTTNPQQNLNSNNHYQLLQMAGVQMGNVAKNEQEEGTENLFQQFYQLGNNANYGVQNQYVHHAMFGANGEYLFISKFSTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00886822;
- 90% Identity
- iTF_01105390;
- 80% Identity
- iTF_01105390;