Basic Information

Insect: Ophraella communa
Gene Symbol: -
Assembly: GCA_035357415.1
Location: CM068986.1:35317125-35329971[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.8e-14 6.9e-11 44.4 1.2 1 44 7 50 7 50 0.98

2 11 1.1e-09 1.6e-06 30.4 4.1 3 44 111 152 110 152 0.93

3 11 1e-09 1.5e-06 30.5 3.2 1 44 266 309 266 309 0.97

4 11 2.1e-14 3e-11 45.5 0.5 1 44 359 402 359 402 0.98

5 11 1.8 2.7e+03 0.9 0.0 16 26 533 543 526 547 0.86

6 11 0.37 5.4e+02 3.1 0.9 17 29 574 586 566 601 0.77

7 11 1.7 2.5e+03 1.0 3.5 12 28 599 615 587 627 0.72

8 11 0.059 86 5.7 4.7 16 38 631 654 619 655 0.78

9 11 0.0025 3.6 10.1 0.2 18 44 668 696 659 696 0.72

10 11 0.32 4.6e+02 3.3 5.0 18 41 696 716 690 717 0.89

11 11 0.32 4.7e+02 3.3 1.0 19 40 725 743 723 745 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.8e-14	6.9e-11	44.4	1.2	1	44	7	50	7	50	0.98
2	11	1.1e-09	1.6e-06	30.4	4.1	3	44	111	152	110	152	0.93
3	11	1e-09	1.5e-06	30.5	3.2	1	44	266	309	266	309	0.97
4	11	2.1e-14	3e-11	45.5	0.5	1	44	359	402	359	402	0.98
5	11	1.8	2.7e+03	0.9	0.0	16	26	533	543	526	547	0.86
6	11	0.37	5.4e+02	3.1	0.9	17	29	574	586	566	601	0.77
7	11	1.7	2.5e+03	1.0	3.5	12	28	599	615	587	627	0.72
8	11	0.059	86	5.7	4.7	16	38	631	654	619	655	0.78
9	11	0.0025	3.6	10.1	0.2	18	44	668	696	659	696	0.72
10	11	0.32	4.6e+02	3.3	5.0	18	41	696	716	690	717	0.89
11	11	0.32	4.7e+02	3.3	1.0	19	40	725	743	723	745	0.79

Sequence Information

Coding Sequence: ATGTCGTCAATTCGACGTTCAGCGGTCTGGAATGTATTTACAGAAACCCATAAATCTGATTTTATTGCCACTTGTAATTTGTGTTCTCAAGAATTTTCTTACAGATCGACAACTACTAATTTAATGAAACACATCCAGAGGAAGCATCCTGACGTAGATATAAACTTTCGTTCGCAACTAAAAGACGAtACATTACCAAAAGAAGTGGAAATTGTCATTGAAAGACAGTTGGAAAATTCCTGTGAAGTTAAATCATTTAAAGTGGAGGTCCAGCCAGTTACTGCAAATTGTAATTATACAGTATTGGATGCAGTTAAACCAGTTCCAAGGCTGTGGGATTGTTTCACTAAAATTTTATCTTCAGACTGTGTTGCTTCTTGTATTGTTTGCCATAAGGAGTTTTCTTATAAGACAACTACCTGGAATCTTAAGAAACATTTAGATAGAAATCATCCAGAATTACAAGCAgaTCTTTCAGATGAACAAGAGCCTGTTTATCAAGAACCCAATAATGAATTTGAACAAAAAAAAGATGCAGAAATGGAAGGAAAGGAAGTTGAACAGCAATATGAACTTCAAGCAGAttcattattattagaaggtactaaagtatttcaaaatcttGACACTGCTACAAGCGATCAGAATCAACAAGTAGTTGGTAACAACGATGACTTGGACAATGATTTCTGGAACTTGGATCATTCTGATGATGACGATGACCCTGATTTCCGACCATCACCTACGTTCGATGAAGTAGCCGATATTAAAAATACTTCTATCACTAAAAAACGATCCCAAATTTGGAATGTTTTCACGGAAAAACCAAATTCCGATTGCGTGGCCATCTGCAACGTTTGCAATCAAGAGTTCTGCTACAGGAGTACAACTAATAATCTTAAGAAACATTTCAAAAGGAAACATCCCGACAATACTTTTGATATCAAAATAGAACGAGTGAAAGAGGAAAATATTCTTGTTCGACAAACGGATTCGACATCAGGTATCCACAAAACCGATGGAGAGGACGACGACGAAAGAGATTCTTCGGATGGCAATACCAAGAGGAAACGTTCAcaaatttggaaatattttacgCGAAAAAAACCAGGGGAGTATGTGGCTATTTGCAATATCTGCAAAAAAGAACTTGGGTTTAGGTCAACGACATCgaatttgaaaaaacatttgGATAGGAAACATCCTAATGTCAAGATGAAAAACGAAAATAACGATGAAGAAAAGAAGACTGCTCCTGAAGTTCGTGTAAAGACATGCTTAGTTTGTTTACAAAACGATCAAACAGAGTCTAGAGAATTTTTACAAATCAATAATGCAAATtccgaagaagaaaaaagttacATGACAAAAATCCAGGAGGTTATGAATCAGTCTGTGgttataaaCGAATCGCACGTAATTTGTCTGCCTTGTGTTGACGATTTAGAAAAAGTAATACAGTTTAGAGAAAAAGTGTTTAAAGCCTTTGAGTTTTGGAGTAAAGTCGAACCAGAACCTGAAATGGAAACGTATGATAATGATGCGGATGATAACCATTCAGATTGCAGTGATTTAGAGGATGGTGAAAGTTTGGCCAAATTTACCTGCAGCAAGTGCAATAAGGTATTTCCTTCTCCATCTATCATGCTTAAACATAACTGTGGGCAACAATCCAGGAAAGAAAGACCTTGTATGAAGAAAGATTCTACTCAAGAAACTTTTTATTGCGAATTCTGTGGAAAATCCTTTAATATCAAATGGAAActcaataaacatttaaaaatatGCCAGTCGAACTCCAGTAAACAATTCAGCTGCAATTTGTGCAATAGGATATTTAAAAAGGCCTACCATCTTCGAGAGCATATGGCGTCACATACTGGTGAACGGAATTACAGTTGCAATTTGTGTGGTAAAACTTTTCAGAGATCTTCTTCAAAACACAAACATATGCGCAGTCACAACGCCAAACCTGgagaaaaatcaaagaaaacgCCGTTTTTGTGTACGATATGTGGTAAAAGTTTTCCTTACAGCAACGGAGCTTCGAGGCACATGAGGGTGCATCTGGGAGAAAGAAGGCATCAATGTCATATCTGTTTAAAGAAATTCAGTCAAACTACGCATCTGAAGgtGCATCTTCGTACTCATTCGGGAGAACGACCATATGGTTGTATGATTTGCGGAAGGACCTTCTCTTTGAACGCTAGTCTTCGAAAACATATGAGGCTTCACGTTGGCTCCGGGGATTTTGTGAAGTTAGTGAAAAATCTCGAAACTGGTTTTCCTCATACCGATATGGTCACCGAAGATGGCTTACAAATTTTAACAGCTGTCGCACACGCTCCGCAAGAGATAGACATGGATGGAAACCCCTGCATTGgttaa
Protein Sequence: MSSIRRSAVWNVFTETHKSDFIATCNLCSQEFSYRSTTTNLMKHIQRKHPDVDINFRSQLKDDTLPKEVEIVIERQLENSCEVKSFKVEVQPVTANCNYTVLDAVKPVPRLWDCFTKILSSDCVASCIVCHKEFSYKTTTWNLKKHLDRNHPELQADLSDEQEPVYQEPNNEFEQKKDAEMEGKEVEQQYELQADSLLLEGTKVFQNLDTATSDQNQQVVGNNDDLDNDFWNLDHSDDDDDPDFRPSPTFDEVADIKNTSITKKRSQIWNVFTEKPNSDCVAICNVCNQEFCYRSTTNNLKKHFKRKHPDNTFDIKIERVKEENILVRQTDSTSGIHKTDGEDDDERDSSDGNTKRKRSQIWKYFTRKKPGEYVAICNICKKELGFRSTTSNLKKHLDRKHPNVKMKNENNDEEKKTAPEVRVKTCLVCLQNDQTESREFLQINNANSEEEKSYMTKIQEVMNQSVVINESHVICLPCVDDLEKVIQFREKVFKAFEFWSKVEPEPEMETYDNDADDNHSDCSDLEDGESLAKFTCSKCNKVFPSPSIMLKHNCGQQSRKERPCMKKDSTQETFYCEFCGKSFNIKWKLNKHLKICQSNSSKQFSCNLCNRIFKKAYHLREHMASHTGERNYSCNLCGKTFQRSSSKHKHMRSHNAKPGEKSKKTPFLCTICGKSFPYSNGASRHMRVHLGERRHQCHICLKKFSQTTHLKVHLRTHSGERPYGCMICGRTFSLNASLRKHMRLHVGSGDFVKLVKNLETGFPHTDMVTEDGLQILTAVAHAPQEIDMDGNPCIG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00459314;
90% Identity: iTF_01106708;
80% Identity: iTF_01106708;