Ocom015381.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- Baz2b
- Assembly
- GCA_035357415.1
- Location
- CM068979.1:71138785-71161056[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-16 7.8e-12 47.0 0.0 5 72 641 709 638 714 0.89 2 2 3.9 7.8e+04 -4.2 0.0 52 70 732 748 732 751 0.78
Sequence Information
- Coding Sequence
- ATGGAccatgaaaatgaaaaaaatagtgAAGTCAACTCAAGTGCCAACAAAATTCCAAACCCTCAAGATCATTCACCTCTACTTGATGCTGCCAGTCTTTTTGGAGCTTACTGGCCAAGGGGTGATGCAGCAGCCAACCTTTTTGCTGTTGCAGCTGGAGGTTTTGGTCTTCCAACACATCCTTCTTTGCAATTTGGAATGTTACCTTCGGCTCCAGCAGTTAGTCGATCACCTGCTCTACCATCATCCTATCAAAGTACAAATGCATCAGCCACTGCCGCAATTTATACAAATACTTTGTCTGCAGTAGCAAATCAAGCAGCTAGCCTTGGTATTCCAGCTGGAAgtGCTGCATGGTGGTCAATGGCTTCTCAGTTGGCTGCACAAGATTACCTTGCTAGATTACAAGCatctggtttaaattttgctggtTTAGGAGGAAGTCCCACTGATTTTAATTATGCAAATATGGGAATGCAATCACTTGCTGGCCAACATAAAACTCCTAAGAGCTCATACAAAAGTGGACACTCCATGACATCCTCAACACCATTGTCTagGTCTCAAGATCATCCCAAAGTATCTATGTCATCTAAATTGGATATCAGCAGTATCTCTGATTCCATGAAATCATCACTTGGAAGTTTACATTCCAGTTCCCAATCATCTCGCAGTAACATTAAACCATCTTCAAATTTGCCAGTTCAACAAAGTACAAAGTTATCTGACAAACCAACAAAACCGAAAAACAATACTGATCCGAGTTCCTTTactaaaagtacaaaaaatgtattGCCCAGCAGTGATAGTCCAAATTTAAAAGAATCATCATCTCCATCACCAAACCTATTCACCAGTCCCTATAGCATTAATAGCAACATTTCCACTGAAAACGGCGAAGGTATTCAAGATGGCTCCAATTATCTTTCTCCAAACGTTTTAAGTGATCCTAATTCTATTTTGGGTGGTGTTAGGTTACCACCTGACACAGAAATAATCAAATACACCTCATCGATAGTCGGTCCAAAAATTCCCGGTACAACTAATAGAGGCAGAAAAAAAACTATCAGTTTGGATCCTCCATTTGTCAGTCTTCATCCATCACCAATTGGTGGATTTATGGAAGGAATATCCAAAAGAAGCAGCTCAAATGGTCAGGATATAACGCCACCTTCTACTCCACCTGGTGAGAAATCTGATGGTGTAAAACTGGGTACGAATGGAAATACGTCAGATATTACTTCCAATTATGAAACTTCCGAATCTACTGGAGAATGTCCTTTAAATTTATCTGTTAAACCGACTACAGAAATATTAAATACCAGTTTTCCTTTGGCGTCTTTAAGTAGCATTTCTTCTAACGTTGGATCTGACAGGATATctCGTAGAAAACCGGGTCCGAAACCTAGACGTATAATTTCATCGGGAAGCCAGTCATCTCCATCTCCTTCTAGCAACCTTTTTTCTCACATTTTTTCTCCTGTAGATTCCCCTAGACCTCCAAGTAGGAACGAGGGATCCGACGGAGGTAGTTCTACTTCTTCAACTCACAAAGAAGGTAGACCGAGAAACTTGGGAAGGGGTATCAGCAAACCGAAGAAGAATACAGTAGCTTCTTTGCTGGCGCAAAGTAGAGCTCTCGGTATAAAACCAGTTCCGATGCTAGATCCGAATACTTCCATAAATCAACAAATGAATATATTAAAGTCGAACATAATGGCAGCTCAACAGTTTTTATCCGAGACTGGAGGTGACGAACAAGCTTTGAACAAATTGCTACAAGAAAAAATCAAGGGAACGCTCAGCGATTCTAGTACAGTAGACGCGACTTCAgattctgataatttaacggATTCGAATCACACGGATTCCGAAATGGAGGTGGAAGTAGTAGCAAAGAAGCAAAAGCATTACGACGAACGTCTGTTAAGAGTACCTTTAGAAAAAGgatgGAAGCGTGAAACAATCATTCGGGGTTTATCGAAAAACGGATTCTTGAAAGGCGATGTTACTTACGTAGCACCGGAAtcatcaaataaatttaaacaaatgtcGGACGTCACGCAGtatTTGGAATACCAAAAATGCCCGGAcctttcaaaagaaaatttcacTTTTAGTTGTAAAGTTATATTAGGTGATTATCTTCAGCCAGTTCCCACCGAACTTCAAGTCGATGGTagcgaatttatttatttaagtgaaGAAGACATGAACAGAAGatTAGATGAATTCAGTTTTTCAATAAGACCGAGTATTCCAGTCGAACAAAGGATAGAAATGGCTAGAAAGCAACAGGCAGCAAGGGAAGCTGCTAGACAAGATAAACAAGAAAAAGAGCAAATTAAGATGATACAAGAGAGCGAAATGGTCGATAAGCAGGAacacataaaaattgaaaaggaaCCGAAATATACGCAGATGATGGAGGATAAAGAATTAAAACGACAACACGCTGCTCTTATCAGGGAacagGAACGAGAAAGAAAACGGCAACACATGGTTCTCGTAAAGTGTCTGGAAAGCAGACGTAAGCTAGAAGCGCGCGAACGCAAAAAGCAACAACTTTTAGCGGAAAAACAAGCCAACAAAGAAAAGAAACTCGAACAGCGTAAACAGGACTTGGAGATATTAACGGAAATCCGAAAACCTTGCGAAGATTTAGAATTAGATCAATCGTATTTGCCAGAATACGATCGAATTCCCGGTTTGAAGTTGTGCGGCAAAGCGTTTTCGGACATTCTGATGGTGTTCGAATTCTTGCACAATTTCGGCGAAACTTTAGGCTTCGACATGGAATCCCTACCGACGCTTAATTCCCTTCAACAAGCCTTGTTGTCCAACAAAAACTCTATGGAAGCCGAAGAAGAATTGTTTTCCGTTATGACTCATTTACTTGTGTGTGCCATCGAAGATCCAGGAATTCCGAATCCAGCTCGATACACCACCATGTTGGGTCAGAGTTTAAGACAAGCCGATATCACGCCTCTGAATATATCGGAAATTTTGAGATTGTACTTGTACGCTAATGCCACTGCCGAAATTAAAGCTCTTACTGGCATTCATTTCGAAAGAGAAAGGGAGAAACGAATAGCAGACCACCATCAAAACGACGATGAAATGTCGATTACGCAATCGGGAAAGAACGCCCCCTATTACGAACTACTACACAATACTCAGACGTACAAGTTGTCAGATCTGTTGAAGAATAGGCCATTCACTTGTCTCACGCCAACTACCAAAGCAGAAATTTTAGCCTATCTCTGCAACGAGTTGTTACAAAACAAGGCCGTTATTCGACAGATAGAAAATTCCTTGGAAACGGTTGCACAGcagaagaaagaaaaatggttgTTAGATATGAAAATTCGAAAGCTAACGTTGCTCCACAACAAAAAGATGAGAATCGAAAATATAGAGAAGCAAGTAAAATTCGACGATGAACCTCTTGCGGATTCTCCTTCTTTGAACAAAGACGATTTGTTGGACGAAGAGGAAAACGAGTTGAGTGAAAACGAAAGTGTAGGAACTCAACCGGAAGAGGAAGAAGATAACAAATTGTCGCAGGAGGAGTTGGGAAAGAAGCttgaaaaatttatcaaaacgtCGGAAATCCATTTCAATACTTTAAAAACTGCCAGCTTGCAGTTACGAGCCATTTGTTTCGGACAAGATCGTTATTACAGAAGATATTGGTCGCTACCAAAAGCGGGTGGTATATTCGTGGAATCGTTGGAAAGTGCCGATCCTGATCGAGTGAAAGAACAATCATGCGCGGACAATTCCGAAGAAATGAGTAGTGACGGAGTTCAAGGTTTAAGCGATTTCGACAATTTAAGCCAGAAAGAGGAAGAAGATGATATGGGTATAGACGAAGAAATAAATCGAATAATGGAGTGTAGCGAAGGGGAAGACAACGATTCCAGGCCGAAGGATAGCGAGGACGAGTATAGGAAATGCGAAAATAGAATATTCGAAAACGGAGAAGAGAGCGGTAATAAAAACGAACAAAAAGATCTTCAGAAAGACACAAACGAATTAGAAAATGTGGTAAAGACGGAAAATTGCGACGCTGAAACCGTAGAAAGCAACGAGGAATTCAATAACACTGAAGAATATGAAAGTTTCGGTGGCAAAACGTTTAGTTTGTTCGAAAGATTAGGACAATGTGTCGAAAGAGAAAACAAGACTGAAGAAGATCTGAAGACGGAGGTCAAAGCCGAAGTAAAGGAAgagttaaaaaatgaaattctcAACGAGCTCAAAACTGAAATGAAACACGATATGGTCATTGAAAACAACAACGAACAAGATGAAGACCAAGAGCCGAAATGGTTCAGTATTTTAAGTTCGGACACTACCACTTGCGACGAAATTAACCTTAGTTCAGGTACCAGATGGGAAAATGGTGTAGGGCCGTGTACAAAAGACATAATGGAACTGAAAATACCTGTTTTCCCTCCGCCGGACTCGAGCGGTTcaaatatatactcaaattgcGATAGTCCCACTCCTTTGCAATTAACGCCAGAAGAAAGTTTTCAATTGGAATACATCAGGAAACATGGAGCTATCAAGACTAACCAGAAACAAGTTATCCCTTCTAAAATGAGGTATGGATGGTGGCGAATTCTCGACGTAACCCAACTTCGTGAAATTTTGGATAGTCTACAGGTAAGAGGAATACGGGAGAGAGAACTCAAGAGAAGTTTTGTGAGTATAATGCAAGCGATGTACGATAAAAAAGGTAGATTGGTAGTCGAAGAAGGGTTTAAAGAGCTAACTACGCTAAACGAAGAGCCAATCGATTCAGTTAAATTTATAGAGGAAGGAGCTCCCGAACCAGATGTGCCTGGTACGTGGAGTAACGCTTTGGAACAGAAGATCGATTTCATTTTACTTGAACAATTGGAAAATCTTGAAGATAAAGTTGCCAATGCTAGTATGCAATCTAAAGGATGGAAGATTCAACAAAGAGATTTTGAGGAAATGTCTCACGAAGACATTATTTCGATTATTAAACAACGACTATCTTCGTTGGAAATGAATATAGAAAGGAGATACCTGAAACCACCATTAGGAGTCAGcaCTGGCGATTCCCATCTTGCAACGTTAAATCAAGAATCGTCCAATACTTCTATGACATCACAAACTATGTCCGACGAAATTCCGAAAGGTCTGGTTACCTGGAGAGAAGCTGTTAACCGTAGTATAGCCGCAGCCCAATTGTCAATGTGCATTTATTCGCTAGAATCGTCCATCGCTTGGGATAGGAGTATTATGAAAGCAAACTGCCAATTCTGTCAAAGTGGTGATAACGAAGATAAACTATTACTATGCGATGGATGCGATAAAGGTTACCATACGTATTGTTTCAAGCCTAAAATGGACAACATACCAGATGGTGATTGGTATTGTACCGAATGTGTTAATAAAGCAACTGGCGAAAGAAATTGCATTGTGTGTAATAAGAAGATATCGGCAACTGGTACAAAACTCGTCGCGTGCGAACTGTGCCCTCGTGCATATCATACGGATTGCATTCaacctaatttgccgaaaatgCCTCGTGGAAAATGGTATTGTTCAAATTGTGCCTCGAAAAAACCACCTCAAAAGAAACCAGTAAAGAAACCTGTAAAGCCACCAAAAGAACTGGAATCGTCCGACCAACCTCCTTCAAGcCCGACTCCGTCACACAGTTCGGTTACCACAAACGAAGATTTATCAGTATTAAATAGTTCTCAAAGCGATACATCTTTAAATATAGTCAATATCGAATCACCAGCCGTCGCTTCCGTAAACAGTAAGAAAGAACGAAACAACAAGAAATTATTGAAAGAATTGGCTTCTTGTAAATCGATTTTGGAAGATTTGGAATGTCACGACGACGCGTGGCCCTTCCTCTTACCCGTTAATACGAAACAGTTTCCGACTTAcaaaaaaatcatcaaaattCCTATGGACTTATCCACTATTAAAAAAAGGCTGCAGGATCAACAGTACAAATCCAAAGATGAATTCTGTTCGGACGTCAGGCAGATTTTTAACAATTGCGAAACGTTTAACGAAGACGACAGTCCTGTAGGTAAAGCGGGGCATTCAATGCGACAATTTTTCGAAGCAAGATGGAACGAACTCAATTTGTCGCATAGTTGA
- Protein Sequence
- MDHENEKNSEVNSSANKIPNPQDHSPLLDAASLFGAYWPRGDAAANLFAVAAGGFGLPTHPSLQFGMLPSAPAVSRSPALPSSYQSTNASATAAIYTNTLSAVANQAASLGIPAGSAAWWSMASQLAAQDYLARLQASGLNFAGLGGSPTDFNYANMGMQSLAGQHKTPKSSYKSGHSMTSSTPLSRSQDHPKVSMSSKLDISSISDSMKSSLGSLHSSSQSSRSNIKPSSNLPVQQSTKLSDKPTKPKNNTDPSSFTKSTKNVLPSSDSPNLKESSSPSPNLFTSPYSINSNISTENGEGIQDGSNYLSPNVLSDPNSILGGVRLPPDTEIIKYTSSIVGPKIPGTTNRGRKKTISLDPPFVSLHPSPIGGFMEGISKRSSSNGQDITPPSTPPGEKSDGVKLGTNGNTSDITSNYETSESTGECPLNLSVKPTTEILNTSFPLASLSSISSNVGSDRISRRKPGPKPRRIISSGSQSSPSPSSNLFSHIFSPVDSPRPPSRNEGSDGGSSTSSTHKEGRPRNLGRGISKPKKNTVASLLAQSRALGIKPVPMLDPNTSINQQMNILKSNIMAAQQFLSETGGDEQALNKLLQEKIKGTLSDSSTVDATSDSDNLTDSNHTDSEMEVEVVAKKQKHYDERLLRVPLEKGWKRETIIRGLSKNGFLKGDVTYVAPESSNKFKQMSDVTQYLEYQKCPDLSKENFTFSCKVILGDYLQPVPTELQVDGSEFIYLSEEDMNRRLDEFSFSIRPSIPVEQRIEMARKQQAAREAARQDKQEKEQIKMIQESEMVDKQEHIKIEKEPKYTQMMEDKELKRQHAALIREQERERKRQHMVLVKCLESRRKLEARERKKQQLLAEKQANKEKKLEQRKQDLEILTEIRKPCEDLELDQSYLPEYDRIPGLKLCGKAFSDILMVFEFLHNFGETLGFDMESLPTLNSLQQALLSNKNSMEAEEELFSVMTHLLVCAIEDPGIPNPARYTTMLGQSLRQADITPLNISEILRLYLYANATAEIKALTGIHFEREREKRIADHHQNDDEMSITQSGKNAPYYELLHNTQTYKLSDLLKNRPFTCLTPTTKAEILAYLCNELLQNKAVIRQIENSLETVAQQKKEKWLLDMKIRKLTLLHNKKMRIENIEKQVKFDDEPLADSPSLNKDDLLDEEENELSENESVGTQPEEEEDNKLSQEELGKKLEKFIKTSEIHFNTLKTASLQLRAICFGQDRYYRRYWSLPKAGGIFVESLESADPDRVKEQSCADNSEEMSSDGVQGLSDFDNLSQKEEEDDMGIDEEINRIMECSEGEDNDSRPKDSEDEYRKCENRIFENGEESGNKNEQKDLQKDTNELENVVKTENCDAETVESNEEFNNTEEYESFGGKTFSLFERLGQCVERENKTEEDLKTEVKAEVKEELKNEILNELKTEMKHDMVIENNNEQDEDQEPKWFSILSSDTTTCDEINLSSGTRWENGVGPCTKDIMELKIPVFPPPDSSGSNIYSNCDSPTPLQLTPEESFQLEYIRKHGAIKTNQKQVIPSKMRYGWWRILDVTQLREILDSLQVRGIRERELKRSFVSIMQAMYDKKGRLVVEEGFKELTTLNEEPIDSVKFIEEGAPEPDVPGTWSNALEQKIDFILLEQLENLEDKVANASMQSKGWKIQQRDFEEMSHEDIISIIKQRLSSLEMNIERRYLKPPLGVSTGDSHLATLNQESSNTSMTSQTMSDEIPKGLVTWREAVNRSIAAAQLSMCIYSLESSIAWDRSIMKANCQFCQSGDNEDKLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCTECVNKATGERNCIVCNKKISATGTKLVACELCPRAYHTDCIQPNLPKMPRGKWYCSNCASKKPPQKKPVKKPVKPPKELESSDQPPSSPTPSHSSVTTNEDLSVLNSSQSDTSLNIVNIESPAVASVNSKKERNNKKLLKELASCKSILEDLECHDDAWPFLLPVNTKQFPTYKKIIKIPMDLSTIKKRLQDQQYKSKDEFCSDVRQIFNNCETFNEDDSPVGKAGHSMRQFFEARWNELNLSHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00910747;
- 90% Identity
- -
- 80% Identity
- -