Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: ECU03_0790
Assembly: GCA_943138245.1
Location: CALPBP010000390.1:50596-55778[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00099 0.18 13.9 0.5 1 23 81 103 81 103 0.98

2 14 1.3 2.4e+02 4.1 1.3 2 19 109 126 108 129 0.85

3 14 0.0097 1.8 10.8 3.2 1 23 142 164 142 164 0.95

4 14 0.0068 1.2 11.3 0.5 3 23 169 190 168 190 0.94

5 14 0.0012 0.21 13.7 6.2 1 23 200 222 200 222 0.98

6 14 0.13 23 7.3 3.5 2 23 256 277 255 277 0.97

7 14 0.024 4.4 9.6 1.1 1 23 280 303 280 303 0.97

8 14 8e-06 0.0015 20.5 3.2 1 23 312 334 312 334 0.98

9 14 4.4e-05 0.008 18.2 0.7 2 22 341 361 340 364 0.89

10 14 0.00017 0.031 16.3 5.7 2 23 375 397 374 397 0.95

11 14 0.00059 0.11 14.6 2.3 1 23 404 426 404 426 0.97

12 14 9.1e-06 0.0017 20.3 0.4 3 23 435 456 433 456 0.94

13 14 6.7e-08 1.2e-05 27.0 0.8 2 23 463 484 462 484 0.97

14 14 3.5e-05 0.0064 18.5 4.3 1 23 490 513 490 513 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00099	0.18	13.9	0.5	1	23	81	103	81	103	0.98
2	14	1.3	2.4e+02	4.1	1.3	2	19	109	126	108	129	0.85
3	14	0.0097	1.8	10.8	3.2	1	23	142	164	142	164	0.95
4	14	0.0068	1.2	11.3	0.5	3	23	169	190	168	190	0.94
5	14	0.0012	0.21	13.7	6.2	1	23	200	222	200	222	0.98
6	14	0.13	23	7.3	3.5	2	23	256	277	255	277	0.97
7	14	0.024	4.4	9.6	1.1	1	23	280	303	280	303	0.97
8	14	8e-06	0.0015	20.5	3.2	1	23	312	334	312	334	0.98
9	14	4.4e-05	0.008	18.2	0.7	2	22	341	361	340	364	0.89
10	14	0.00017	0.031	16.3	5.7	2	23	375	397	374	397	0.95
11	14	0.00059	0.11	14.6	2.3	1	23	404	426	404	426	0.97
12	14	9.1e-06	0.0017	20.3	0.4	3	23	435	456	433	456	0.94
13	14	6.7e-08	1.2e-05	27.0	0.8	2	23	463	484	462	484	0.97
14	14	3.5e-05	0.0064	18.5	4.3	1	23	490	513	490	513	0.96

Sequence Information

Coding Sequence: ATGACATCATCTCCATCATCATTATCAGCTGTTAAGGAACAGGTTGAGAAAATGATTGAAACAATACATAGTTTGGATTCTGCTGAAAAGAATGAAGCTTTGGGATTCATTCGCAAATGTATAGATCAATCAAAATCAACGAAAACTTCATCTAAAATTAAGTCTAATACTCGACCTAAACGTAAAAATCGGAAGAAACACATGTTTAAAAACATTTCTTCCTTCATTAAAAAACCAATATTTAAATGCCGAGTTTGTGGCATTTCCAATAAGACTAAATCAgctttattaaaacatttaggGACACATATTGGCACTCCTATTTCTTGTAAGAATTGCAGAAGGGATTTTAATAACAGGGCTTCTTTTTTGtgtcatatttcattaaaaatgtgTTATAAAAAGAGATTAATTGTGAAGGAATATCACTGCACTCAATGTACGAAAGTATTTGGGTATAAAAGGCAATTTGATAAACATGTGGAAGGACATAAAAGAAATAACTGTACGTACTGTGATACTAAAATAACTAGGAGGAAAGAATTGGCAGatcatttgttaaatattcaCTCTATTAAATTAGAGCGTACTGTTATGTTCAAATGTGAATTCTGCGAAAAAAGGTATGTAAAAAAACGATCTTTATATCACCATATGAAACAACACGccgaaaataaaatagtatgtaTGGAATGTGGTTTTCTAAGCAACACTTCTGAAGAAAATGATCTTCATTTGAAAGATCACGAAAAAAATCGTCCATGGAAGTGCAATAAATGTGGAGACAGATTTTTGCGTAGACAGCAATACGTACATCACATAAAGagACACGATCGGTATAAATGTGTAACTTGCAACGAAACTTTTGCATTAAAAACACGCATTTTGCGTCACAGACAAAGAGGACATTCTGTCTTAGGCCTAGAGCCTCAACATAAATGTCCGCATTGTCCGATGGCTTTTCAGAGGAAGTTAAACTTGCAAATTCATATCCGGAAACATACAGATGAAAAACTAATGTCGTGCAAATATTGCGATAAAAACTTCCGATCcccatatttatatttcaaacatATTGCATCCACAGTTCACGACATGAATTCCCCAGAAACCAAACAATTAGTTTGCGAAAATTGCGGGAAAACTTTTTCTAAAAAACACCATTTGGATCAACACTTACATCGAGTACATAAACAAGCCAAACAAACATTTATATGCGAATATTGTGGTCTCAAATGTTCCAATCGAACAAATATGGACcgacatttaaatttacatcttgAAAACAAGAAAGAAGTTATTTGTGAACATTGCGGTCAAGCATTTTATAATCAGTCCAGCTTAAAAGATCATATAAGCTACGTCCATTCCCAAGAAAAAGTTTTGAAGTGCTCCCAATGCGACAAAGCCTTTAAAAGAAACTCAGAACTTGTTCGCCACATGGCCACACATTCAGAATTACGTCCACATGTTTGCGAAACTTGCGGCGTATCTTACAAACGAAAAAATCATCTGCGAAGACACCAAGAATCGCAACATGGAGTTGTCCAGAAATCCAGACGAGTTCAGAGATTAAAAAAAggtgaaaatggagaattagtACCAATTCCTGAAGAGAAAAAGGCGAAATCCACCCACAAGAAACCCGAACCAGTGGTTAACAATCAGTTATTTTCTATAATGGATGCGCAGTCTGGTGAAATGGTTACGTTTACGATACCAGAAAGTATTGAAACTCAGGATTTAGCTATTTTGAACATCAAACAAGAATTGATTCAAACAGTGGAACTACCGAATTTGGTTTTGAATACtaatgataatattattttaactaaTGACCAATTGGTTAACGCTTTAGAACCAagcttttcaaataattttctaaatggaGAATTACCgcaaattgataatattttggcACAACCAGCAGTTCAAAATCAAACTACTTGTGATATTTTATTGCCCGAAAATCGAATTATGAATTTGAGTGATTATTCCCAAAACCCTTATCCTTTTATTTAA
Protein Sequence: MTSSPSSLSAVKEQVEKMIETIHSLDSAEKNEALGFIRKCIDQSKSTKTSSKIKSNTRPKRKNRKKHMFKNISSFIKKPIFKCRVCGISNKTKSALLKHLGTHIGTPISCKNCRRDFNNRASFLCHISLKMCYKKRLIVKEYHCTQCTKVFGYKRQFDKHVEGHKRNNCTYCDTKITRRKELADHLLNIHSIKLERTVMFKCEFCEKRYVKKRSLYHHMKQHAENKIVCMECGFLSNTSEENDLHLKDHEKNRPWKCNKCGDRFLRRQQYVHHIKRHDRYKCVTCNETFALKTRILRHRQRGHSVLGLEPQHKCPHCPMAFQRKLNLQIHIRKHTDEKLMSCKYCDKNFRSPYLYFKHIASTVHDMNSPETKQLVCENCGKTFSKKHHLDQHLHRVHKQAKQTFICEYCGLKCSNRTNMDRHLNLHLENKKEVICEHCGQAFYNQSSLKDHISYVHSQEKVLKCSQCDKAFKRNSELVRHMATHSELRPHVCETCGVSYKRKNHLRRHQESQHGVVQKSRRVQRLKKGENGELVPIPEEKKAKSTHKKPEPVVNNQLFSIMDAQSGEMVTFTIPESIETQDLAILNIKQELIQTVELPNLVLNTNDNIILTNDQLVNALEPSFSNNFLNGELPQIDNILAQPAVQNQTTCDILLPENRIMNLSDYSQNPYPFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00769052;
90% Identity: iTF_00769052;
80% Identity: -