Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010000136.1:26384-30611[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00025 0.045 15.8 0.6 1 23 131 154 131 154 0.92

2 16 0.00052 0.094 14.8 0.1 1 23 159 181 159 181 0.97

3 16 2.6e-05 0.0047 18.9 0.2 1 23 197 219 197 219 0.98

4 16 1.2e-05 0.0021 20.0 1.9 1 23 233 256 233 256 0.97

5 16 3.8e-05 0.007 18.3 0.8 1 23 272 294 272 294 0.98

6 16 0.00022 0.04 16.0 0.8 1 23 307 329 307 329 0.99

7 16 0.0061 1.1 11.4 0.6 1 23 342 365 342 365 0.96

8 16 8.4e-06 0.0015 20.4 0.3 1 23 386 410 386 410 0.97

9 16 0.24 44 6.4 1.0 2 23 417 439 416 439 0.94

10 16 4.2e-07 7.7e-05 24.5 2.7 1 23 445 467 445 467 0.98

11 16 0.0025 0.46 12.6 0.3 1 23 473 495 473 495 0.98

12 16 2.6e-05 0.0048 18.9 0.8 1 23 501 523 501 523 0.98

13 16 0.00037 0.068 15.2 1.7 1 23 529 551 529 551 0.98

14 16 0.00088 0.16 14.1 0.9 1 23 557 579 557 579 0.98

15 16 8.1e-08 1.5e-05 26.8 1.7 1 23 585 607 585 607 0.97

16 16 4.9e-06 0.00089 21.2 1.1 1 23 613 635 613 635 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00025	0.045	15.8	0.6	1	23	131	154	131	154	0.92
2	16	0.00052	0.094	14.8	0.1	1	23	159	181	159	181	0.97
3	16	2.6e-05	0.0047	18.9	0.2	1	23	197	219	197	219	0.98
4	16	1.2e-05	0.0021	20.0	1.9	1	23	233	256	233	256	0.97
5	16	3.8e-05	0.007	18.3	0.8	1	23	272	294	272	294	0.98
6	16	0.00022	0.04	16.0	0.8	1	23	307	329	307	329	0.99
7	16	0.0061	1.1	11.4	0.6	1	23	342	365	342	365	0.96
8	16	8.4e-06	0.0015	20.4	0.3	1	23	386	410	386	410	0.97
9	16	0.24	44	6.4	1.0	2	23	417	439	416	439	0.94
10	16	4.2e-07	7.7e-05	24.5	2.7	1	23	445	467	445	467	0.98
11	16	0.0025	0.46	12.6	0.3	1	23	473	495	473	495	0.98
12	16	2.6e-05	0.0048	18.9	0.8	1	23	501	523	501	523	0.98
13	16	0.00037	0.068	15.2	1.7	1	23	529	551	529	551	0.98
14	16	0.00088	0.16	14.1	0.9	1	23	557	579	557	579	0.98
15	16	8.1e-08	1.5e-05	26.8	1.7	1	23	585	607	585	607	0.97
16	16	4.9e-06	0.00089	21.2	1.1	1	23	613	635	613	635	0.98

Sequence Information

Coding Sequence: atggcAGAAATGACCGCTGATCAATGCCGAACGTGTTTAGCTAAAGAATGCAAGTTGATATCTTTGGTTGCAGATCATGTAGTATGTGATAAGGTTATGTCTGTCTTGgaattaataaaaacatgtaCTTCTGCTCAgATTGAAATAGATGATGACTTCCCTCAATATGTGTGCTTGCAATGTATTCATTCGGCCGAAAAAGCTTACGAATTCAGAATACAATGTGAGAAAGCAGACAATTCTTTGCGATCGAATGCAGAAGCATTTGATTGCGACGTATCGGAAGATAACTGCGAAAACTATGAAGTATTAGAGCCAGAATTTAAAACTGAGGATGAAAGTTATTTAACCATTTTAGAAAACAACATAAAAACAGAACAAGTCGATAATTATTCCTGTACTATTTGCAACTTAAACTTCCCTACAGCAACTGCGCTTACAAAACACACATCTTTTTCACATCAGCCCAATTTTTACGAGTGCCCAAATTGTCCAGTTCGTTTTATATCGCGAGAATTGTTAGATAAACATGTTGTAAAACACGACAATGataaacaaagaaaaaacaaaagaaaaagaaaaatcgaTTATGTCTGCGGTATTTGTGGTAAAAAATACGCAAATTTAACCGTTTTAAATAATCATGTACGAAAACATACTACCGATGAAAAATCTAAAAAGAATAACGCTAATACTTATATTTGTCATACGTGCGATCAGCATTTTGTTAGAGCCGAAGATTTGCAATCACACATGGAAAAAATTCACGCACTTAAAAGCGAAGAAAAAGAAACCACAACAGTCCCagcaaaatttaaatgcaaatattgttacaaaataTTCACTGAGGAAGACGAATTGCAAGAACATTTAACAGTTCACagtaagaaaaagaaaaatccctcAAATAAAGTATCATACAAATGCAAGATTTGCAATTTGAGCGCCAAATCGTTAGAGGACATGAAAAACCATTTACAAACGCATGATATAAGCTCAAAAGACATCTTCTCCCACTTATCTTATCAGTGTGTTGAATGCGACCaagattttaattcaatttatgaatattttaaccATTCATCTACCGTTCACGTGAGCACAAAAATCGAACACAGTTCTTCAGCGGGCACGCGTGTTGTTCGAAAACGTCCGTACACTTGCGATGTACAAAACTGCGACAAATCTTTTCCGTCGCCGAGTGCTCTGAAGAAGCATTCTTTAAGCCACGAATCCCAATGGCCGAAGAAATGCAGATATTGCGATGCAGTGATGAGCAAGTGGCACGATtatatgatacatttaaatGATAATCATGATGACAAAAAGACGTTTGTTTGTTCCCAGTGTGGGAAAAAGTTTTTTAGGGAGAGGAATTTGCAGAGCCACATGAAAACGCATAACGGCGAGAGGAATTATATGTGTGATTTTTGTGGCTTTAGTTTTCTAGCTCAAAATAATTTGgtgGCTCATAGAAGAATACATACGGGCGTGAAACCGTATAAATGTACTTATTGTCCTCAAGCATTCGCGCAGCACGCCGGTTTACGTTCACACCTACTCAACCATAATGGAGAGAAAAAACACGAATGCCcgacatgtaaaaaaaaattcttacgaATTGGCGCGCTTAGAAATCACATCAAAACACACACAGGGGTGAAAGACTACGCTTGCCATATTTGTGGTGCGCGCTTCGGGGCCTCATCAACTAGAAAAAAACATCTTTTAACTCACACagGGGAAAGAAACCATGTTTGTGATTATTGTGGAAAGGCGTTCTCACGTCGTTCGAATCTTTCTGTTCATAGGAAAATACATACGGGCGAAACGCCGCATGTGTGCGAAGTATGTGGAAAAGGATTTATTCAAGCTCATGTTTTAAGATCGCATATGAACACGCACAGAAAGAGAGGAGAATTAAAGAAAGATAAGGCGGAAAAAATACCCGCTGTTCAAAATGAAACGCCAGAAGACATTACtgttttaattgaatttgattaA
Protein Sequence: MAEMTADQCRTCLAKECKLISLVADHVVCDKVMSVLELIKTCTSAQIEIDDDFPQYVCLQCIHSAEKAYEFRIQCEKADNSLRSNAEAFDCDVSEDNCENYEVLEPEFKTEDESYLTILENNIKTEQVDNYSCTICNLNFPTATALTKHTSFSHQPNFYECPNCPVRFISRELLDKHVVKHDNDKQRKNKRKRKIDYVCGICGKKYANLTVLNNHVRKHTTDEKSKKNNANTYICHTCDQHFVRAEDLQSHMEKIHALKSEEKETTTVPAKFKCKYCYKIFTEEDELQEHLTVHSKKKKNPSNKVSYKCKICNLSAKSLEDMKNHLQTHDISSKDIFSHLSYQCVECDQDFNSIYEYFNHSSTVHVSTKIEHSSSAGTRVVRKRPYTCDVQNCDKSFPSPSALKKHSLSHESQWPKKCRYCDAVMSKWHDYMIHLNDNHDDKKTFVCSQCGKKFFRERNLQSHMKTHNGERNYMCDFCGFSFLAQNNLVAHRRIHTGVKPYKCTYCPQAFAQHAGLRSHLLNHNGEKKHECPTCKKKFLRIGALRNHIKTHTGVKDYACHICGARFGASSTRKKHLLTHTGERNHVCDYCGKAFSRRSNLSVHRKIHTGETPHVCEVCGKGFIQAHVLRSHMNTHRKRGELKKDKAEKIPAVQNETPEDITVLIEFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00767420;
90% Identity: iTF_00769007; iTF_00767420;
80% Identity: -