Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010000031.1:216970-222497[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.79 1.4e+02 4.8 1.8 1 23 127 149 127 150 0.93

2 14 4e-05 0.0073 18.3 4.0 1 23 150 172 150 172 0.94

3 14 1.7e-05 0.0031 19.5 0.4 2 23 179 200 178 200 0.96

4 14 0.00063 0.12 14.5 0.0 1 23 233 255 233 255 0.97

5 14 0.012 2.2 10.5 2.4 3 23 263 283 261 283 0.91

6 14 5.4e-07 9.8e-05 24.2 2.6 1 23 289 311 289 311 0.98

7 14 0.00012 0.021 16.8 1.8 1 23 320 342 320 342 0.96

8 14 2e-05 0.0037 19.2 0.1 2 23 349 370 348 370 0.95

9 14 5.9e-09 1.1e-06 30.4 0.5 1 23 376 398 376 398 0.99

10 14 2.6e-07 4.7e-05 25.2 1.4 1 23 404 426 404 426 0.98

11 14 1.9e-06 0.00034 22.5 1.1 1 23 432 454 432 454 0.99

12 14 0.00027 0.049 15.7 0.0 1 23 460 482 460 482 0.94

13 14 4.3e-07 7.8e-05 24.5 0.0 2 23 489 510 489 510 0.97

14 14 1.5e-06 0.00027 22.8 0.5 3 23 518 538 516 538 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.79	1.4e+02	4.8	1.8	1	23	127	149	127	150	0.93
2	14	4e-05	0.0073	18.3	4.0	1	23	150	172	150	172	0.94
3	14	1.7e-05	0.0031	19.5	0.4	2	23	179	200	178	200	0.96
4	14	0.00063	0.12	14.5	0.0	1	23	233	255	233	255	0.97
5	14	0.012	2.2	10.5	2.4	3	23	263	283	261	283	0.91
6	14	5.4e-07	9.8e-05	24.2	2.6	1	23	289	311	289	311	0.98
7	14	0.00012	0.021	16.8	1.8	1	23	320	342	320	342	0.96
8	14	2e-05	0.0037	19.2	0.1	2	23	349	370	348	370	0.95
9	14	5.9e-09	1.1e-06	30.4	0.5	1	23	376	398	376	398	0.99
10	14	2.6e-07	4.7e-05	25.2	1.4	1	23	404	426	404	426	0.98
11	14	1.9e-06	0.00034	22.5	1.1	1	23	432	454	432	454	0.99
12	14	0.00027	0.049	15.7	0.0	1	23	460	482	460	482	0.94
13	14	4.3e-07	7.8e-05	24.5	0.0	2	23	489	510	489	510	0.97
14	14	1.5e-06	0.00027	22.8	0.5	3	23	518	538	516	538	0.97

Sequence Information

Coding Sequence: atgGATCtttcaaattgtaattttgattttaatgtaACCTGTAGAACTTGTTTACTAGCGAATACTAATTTAAGATCAATAAATGATgttgaaatatcaaatattttaaattgttgtacATTTATTCAGaTTCAAATTAATGATATACTACCAAATGGTATATGTGACCAATGTATAATGTTAGCAAACCAATGTTACAAGTTTAAAGAACAATGTGAAAAATCGGAGAAAATTTTACGGTCTTACATtgaattaaacaatttcaaaattgatttagagaatgaaaattcaaaatttgaagaTTATTTAGGTACTAGCATAAATTTAGGCAAAGGAACAGgTACACAAACTGAAGTTTCTACTCCAATAACAGTGCCATTTATTTGCCAAAcatgtaatcaacaatttttaatagaagatgaaTACAATAAACATAAATCCACTCATCATTCTTGTATTCATTGCAATGAAACATTTACAAGTTCACAACAACTAAAACGGCATATTAAAACACATATGGAATCCAATCAAATTTCCTGCAACAAATGTGGCAAGAAATTTGTTGAAGATTCATCACTTCAAGAACATATGCAAGAACACGAAGAAAGCAGTGACAATTTACAAACATCTACTGAGAGTTCGAATTCAGcagattttacaagttttttagATATGGCACCACCGTCTCCACTTGCATTTCCTTGTGGAGAATGCAATCAGTCGTTTAATGCCGCTGAAGATTTAGAACTGCATAAGGCTACACATTCTACCAACGGGGAACATATTTGTATTCAATGCAACAAACAGTTTGCCgctcGTCAAACATTAAAAAGGCATGTAAAAACGCACATGATCCATAAGCCTCACGTCTGCAAGGAATGCGGAAAAGGCTTTGCTGAATCTCATGCTCTCACGAAGCACATGCGACGCCATGCTGGTCTTCCTAGAGaaaagaaacatttttgtcAGTTTTGCGGACAAGGATTTACAGAACCATTCTATTTGAATGTACATATAAGAAAACACACCGGAGAACGACCATTAATGTGTGCAACTTGTGGGAAAAGTTTTGCGGATCCCAGGTCGTTAAAAGCTCATAATATGATCCATTCGGGAGAGAAACCATACAAATGTCCTGTTTGCAATAAGGGCTTCACCCAAAGTGTCAACCTAACCAAACATATTCGCATCCACACTGGAGAACGCCCTTACATCTGCTCCGTTTGCGGAAAACGTTTCACCCAATCCAGTTCTTTAGACAAACACTCTCGGACCCACTCCGGCGTTCGCCCCTACAGCTGTACCGAGTGCCCCAAACGCTTCGCCGAACGGGGCACCCTCGTCCACCACATCCGAACCCACACGGGGGAGAAACCCTACGTTTGTGCAGTCTGTGGGGCCGCATTCGCTTCGAGTAGTGAATTAAGACTGCATGATAGAAGACATACAGGTGTCAAAAGAAATGTTTGTCCGGTGTGTGGAAAAGATTTTGCGACGCCGAGTAATTTGGTGATACATACTAGAAGTCACACGGGGGAGAAGCCCTATGGGTGTGAGATGTGTGGAAAGAGGTTTGCGGACAAAGGAAGTTTGAAGAAACATGTTAATAGACATCAGGAAAAGAGGGGCGAACCAGACAGATTTTATAATATGAATTGA
Protein Sequence: MDLSNCNFDFNVTCRTCLLANTNLRSINDVEISNILNCCTFIQIQINDILPNGICDQCIMLANQCYKFKEQCEKSEKILRSYIELNNFKIDLENENSKFEDYLGTSINLGKGTGTQTEVSTPITVPFICQTCNQQFLIEDEYNKHKSTHHSCIHCNETFTSSQQLKRHIKTHMESNQISCNKCGKKFVEDSSLQEHMQEHEESSDNLQTSTESSNSADFTSFLDMAPPSPLAFPCGECNQSFNAAEDLELHKATHSTNGEHICIQCNKQFAARQTLKRHVKTHMIHKPHVCKECGKGFAESHALTKHMRRHAGLPREKKHFCQFCGQGFTEPFYLNVHIRKHTGERPLMCATCGKSFADPRSLKAHNMIHSGEKPYKCPVCNKGFTQSVNLTKHIRIHTGERPYICSVCGKRFTQSSSLDKHSRTHSGVRPYSCTECPKRFAERGTLVHHIRTHTGEKPYVCAVCGAAFASSSELRLHDRRHTGVKRNVCPVCGKDFATPSNLVIHTRSHTGEKPYGCEMCGKRFADKGSLKKHVNRHQEKRGEPDRFYNMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275575;
90% Identity: iTF_00767419;
80% Identity: -