Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010001836.1:165601-170934[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2e-05 0.0036 19.3 1.5 1 23 409 431 409 431 0.97

2 18 0.011 2 10.6 3.3 1 20 437 456 437 459 0.93

3 18 1.4e-05 0.0026 19.7 0.5 1 23 465 487 465 487 0.99

4 18 2.9e-05 0.0053 18.7 3.5 1 21 493 513 493 515 0.94

5 18 3e-05 0.0055 18.7 4.6 1 23 521 543 521 543 0.99

6 18 2.9e-05 0.0053 18.7 5.3 1 23 549 571 549 571 0.97

7 18 2.3e-05 0.0042 19.0 8.1 1 23 577 599 577 599 0.97

8 18 1.1e-07 2e-05 26.3 2.7 1 23 605 627 605 627 0.98

9 18 8.3e-05 0.015 17.3 6.7 1 23 633 655 633 655 0.97

10 18 1.4e-05 0.0025 19.7 6.9 1 23 661 683 661 683 0.98

11 18 5.3e-07 9.7e-05 24.2 2.8 1 23 689 711 689 711 0.98

12 18 7.5e-06 0.0014 20.6 7.9 1 23 717 739 717 739 0.98

13 18 3.2e-05 0.0058 18.6 9.1 1 23 745 767 745 767 0.98

14 18 1.9e-05 0.0035 19.3 7.7 1 23 773 795 773 795 0.98

15 18 0.0012 0.22 13.7 8.8 1 21 801 821 801 823 0.94

16 18 0.00019 0.034 16.2 0.2 1 23 829 851 829 851 0.97

17 18 0.037 6.7 9.0 4.5 1 23 861 883 861 883 0.98

18 18 7.9e-07 0.00015 23.6 0.9 1 23 889 911 889 911 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2e-05	0.0036	19.3	1.5	1	23	409	431	409	431	0.97
2	18	0.011	2	10.6	3.3	1	20	437	456	437	459	0.93
3	18	1.4e-05	0.0026	19.7	0.5	1	23	465	487	465	487	0.99
4	18	2.9e-05	0.0053	18.7	3.5	1	21	493	513	493	515	0.94
5	18	3e-05	0.0055	18.7	4.6	1	23	521	543	521	543	0.99
6	18	2.9e-05	0.0053	18.7	5.3	1	23	549	571	549	571	0.97
7	18	2.3e-05	0.0042	19.0	8.1	1	23	577	599	577	599	0.97
8	18	1.1e-07	2e-05	26.3	2.7	1	23	605	627	605	627	0.98
9	18	8.3e-05	0.015	17.3	6.7	1	23	633	655	633	655	0.97
10	18	1.4e-05	0.0025	19.7	6.9	1	23	661	683	661	683	0.98
11	18	5.3e-07	9.7e-05	24.2	2.8	1	23	689	711	689	711	0.98
12	18	7.5e-06	0.0014	20.6	7.9	1	23	717	739	717	739	0.98
13	18	3.2e-05	0.0058	18.6	9.1	1	23	745	767	745	767	0.98
14	18	1.9e-05	0.0035	19.3	7.7	1	23	773	795	773	795	0.98
15	18	0.0012	0.22	13.7	8.8	1	21	801	821	801	823	0.94
16	18	0.00019	0.034	16.2	0.2	1	23	829	851	829	851	0.97
17	18	0.037	6.7	9.0	4.5	1	23	861	883	861	883	0.98
18	18	7.9e-07	0.00015	23.6	0.9	1	23	889	911	889	911	0.96

Sequence Information

Coding Sequence: atgaattctGGTGACCAGCATAATTTAGCCCCATCTGGGGCGACAAATCAGCCCGGCGCCTCAAACGACGATGGAAACCGAGGACCGAATCAAGGCCAAGGAGGCGTTCAGCCAACGACTACGGTTCCAACTGATCTACGGGTCAACACAACAGCCCTCAATGCTGTGGCGCTGAGTAGTGTAGCAAAATATTGGGTTTTAACGAACCTTCTTCCTGGACCAATACCACAGGTGTCTGTCTATGGGTTACCCGGAGCAACACAGGGTACCACAGGCCGAAATGATAACACGAAACCTACACAGGAGGGTTTACTCGCACAACACGGCGGTTTACTCCCCACAGATCCAATGTTGCTACAACAACATTCTCAAATCCCTGTTTCAATCTCCACACCACAAGGAGTCGCCAATATTTCCATTCCCATGCAAGGCAGAACTTCTCAACAACCTGAACAACTTAACCACCAACAACAACAACCTCAACAACCTTTACAACAACCTCTTGTTCAAGTCCAAGTCCAAGACAACATGGTTTCCGTAATAGACGACTCTAAAGATCAAATTCAAAAACCTGATTTGATACAACAATGTAATCAGGGGGATTTACAACAGATGCCTCAGGAACAACAACAGAATTTGACGGTACAACAGTTACAACACTTACAAGTACAACAAGTTATAGATAATGTTGTAAGAATGGAAAGTGATAACAATCAGGACAACAATCAAAATGAATCTATTAACAATGATTTGCAAATTGTTAAAGATGAAAAAGGAATTCAGAATTGTGCAAAATTATTATCATCGGCACAATTTGGTTTGCAAGATATAAAGGGTAATTTTTCCATGCCTGATATAAAGTCTGGACATCATATGATGGATGTAAGAACTGCCGATGGTTCAATAGTAAAAATATCTGCCGGTATTCAAGAACAAGATTTGGCCAAAACTTTAGGAGTTGAAATGGTCCAAAATATGTATAAAGTCAACGTAGACGATATAAATCAGTTGTTAGCATACCACGAAGTTTTTGGTAAGCTCCAAAACGAAATGGTTACGGGAAATGCCCAAAATCTTCCCAATAATTCAACAGCGCAAACATCTACAGGGTCTGTCGTAACTAATACAAACATAAATATGAACAAATCGTTGGAAAGTGATCAAGAACCATCGACTTCATCAATATCTGCAGATAGTCCGCCAGCTGTAATCGCTGCTGGCACTCATGTCTGTGATTTATGCGGCAAAATGTTCCCATTTCGCTACCAACTAATCGTTCACAGAAGATACCACACGGAACGAAAACCATTTACTTGTCAAGTTTGTGGAAAAGCCTTTACATGCGCTGCAGAACTAACCAGACATGGCAAATGTCACCTAGGAGGATCAATGTATACATGTGCAGTTTGTTTTCACGTTTTTGCCGATGCAGCGAGTTTAGAACGGCACATGAAACGCCATTCCACTGACAAACCATATGCGTGTAACATATGTGGCAAATCATTTGCCAGAAAAGAACATTTGGACAACCATACTAGATGCCATACTGGTGAAACACCATACAGGTGTCAATACTGCGCTAAAACGTTTACTAGAAAAGAACATATGGTTAATCACGTGCGTAAACATACTGGGGAGACACCACATcgttgtgaaatttgtaaaaaaagttttacaagGAAAGAACATTTTATGAACCATGTAATGTGGCATACTGGTGAAACGCCTCATCATTGTACCACTTGTGGTAAAAAATATACCAGAAAAGAGCATTTGGCGAACCATATGAGGTCTCACACAAATGATACACCATTCAGATGTGAAATATGTGGAAAAAGTTTTACCAGAAAAGAGCATTTCACGAACCATATTATGTGGCACACTGGTGAAACACCTCATAGATGTGATTTTTGTTCTAAAACATTTACTAGAAAAGAACATTTGTTAAACCATGTTCGTCAACATACCGGGGAATCCCCACATAGATGCACATTTTGTTCCAAATCTTTTACTAGAAAAGAACATCTTATCAACCATATTCGTCAACACACCGGCGAAACACCTTTCCGGTGTAGTTATTGCCCAAAAGCATTTACCAGAAAAGACCATTTGGTAAATCATGTCCGTCAACACACAGGGGAATCCCCGCATAAATGCACATATTGCACGAAATCATTTACTAGAAAAGAACATCTGACAAATCATGTGCGTCAACATACAGGGGAATCCCCCCATAGATGCCATTTTTGTTCTAAATCATTTACAAGAAAGGAACATCTAACAAATCATGTTAGAATACACACGGGGGAATCCCCGCATAGGTGTGAGTTTTGCCAGAAAACTTTTACTAGAAAAGAACATTTGACGAATCATTTACGCCAGCATACAGGAGAAACACCTCATTGTTGTAACGTATGTTCAAAACCATTCACCCGAAAAGAGCATTTGATAAACCACATGAGATGCCACACAGGAGAACGGCCATTTGCTTGTGGTGAATGCGGCAAATCATTCCCTTTAaaaggaaatttattatttcaccAACGATCGCATAATAAAGGATCTAACGCTGAACGACCTTTCCGTTGTGACTTATGCCCTAAAGACTTCATGTGCAAAGGTCATTTAGTCTCTCATCGTCGCTCGCATAGTGGAGAACGACCTCACGCATGCCCAGACTGCGGAAAGACTTTTGTTGAGAAAGGAAATATGTTGAGGCATCTAAGGAAGCATACGAACGAAGGAGGGGCTACTACGACAGCGGCTGGACAAGTGGGGCAACAACAACAAGCGACGACAACGGCTAATAATATTCAGATACCGGCTATGAGTGCGCCGGCCCCTCAAGGGGTACAGCAGGGGGCAATGCAGCCTCCGGTGCCGCAGTTGTATCAACAGCCGACGCATGCGGGAACACCGCATCCGGGTAATGTTTTAGCCAgctattaa
Protein Sequence: MNSGDQHNLAPSGATNQPGASNDDGNRGPNQGQGGVQPTTTVPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGATQGTTGRNDNTKPTQEGLLAQHGGLLPTDPMLLQQHSQIPVSISTPQGVANISIPMQGRTSQQPEQLNHQQQQPQQPLQQPLVQVQVQDNMVSVIDDSKDQIQKPDLIQQCNQGDLQQMPQEQQQNLTVQQLQHLQVQQVIDNVVRMESDNNQDNNQNESINNDLQIVKDEKGIQNCAKLLSSAQFGLQDIKGNFSMPDIKSGHHMMDVRTADGSIVKISAGIQEQDLAKTLGVEMVQNMYKVNVDDINQLLAYHEVFGKLQNEMVTGNAQNLPNNSTAQTSTGSVVTNTNINMNKSLESDQEPSTSSISADSPPAVIAAGTHVCDLCGKMFPFRYQLIVHRRYHTERKPFTCQVCGKAFTCAAELTRHGKCHLGGSMYTCAVCFHVFADAASLERHMKRHSTDKPYACNICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTTCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTFCSKSFTRKEHLINHIRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRCHTGERPFACGECGKSFPLKGNLLFHQRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHTNEGGATTTAAGQVGQQQQATTTANNIQIPAMSAPAPQGVQQGAMQPPVPQLYQQPTHAGTPHPGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00903477;
90% Identity: iTF_00769004;
80% Identity: -