Oard002384.1
Basic Information
- Insect
- Ophonus ardosiacus
- Gene Symbol
- bab1
- Assembly
- GCA_943138245.1
- Location
- CALPBP010000067.1:457858-490875[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-11 1.4e-08 35.9 0.0 1 39 433 472 433 476 0.90 2 4 1.7e-12 1.1e-09 39.5 0.1 1 39 487 525 487 528 0.95 3 4 9.9e-18 6.3e-15 56.2 0.0 2 45 543 587 542 587 0.96 4 4 5.3e-19 3.3e-16 60.3 0.0 1 44 594 638 594 639 0.96
Sequence Information
- Coding Sequence
- ATGGCAAGCCAACACTACTGCCTAAGATGGAACAACTATCAGAGTAACATGACGTCAGTGTTCCATCAACTTCTTCAGACGGAATCGTTTGTGGATGTTACTCTTGCTTGCAACGACCTATCCCTCAAAGCTCACAAGGTCGTTTTGTCGGCTTGTTCGGCATATTTCCAGAAACTTCTTCTGGAAAATCCATGTAAGCATCCCACGATCATCATGCCACAAGATGTCTGTTTCTCAGATCTTAAGTTTATCATCGAGTTTGTTTACAAAGGAGAAATTGATGTCTCGCAAGCAGAACTACAGattttgcctGAATTACGAAGCAACCGTGTTGCTATCCGACGTGTGTGGTTCCAGCAGGATGGGGCGACAGCCCACACAGCTAGAGCATCAGTGGACGTTATTACCGATCGCCTTATTTCCAGCTTTGGTGACATTCATTGGCCTCCTCATTCGCCAGATTTGTCCATATGCGATTTTTCCTTGTGGGGTCACCTCAAGATACGCATGTACAAACACAAACCCCGTACATTGGAAGAATTGAAAGAAGCTATTCTcTCCCTGTTGAAAACTGCCGACCAGCTCAAAATCAAAGGCCTTTGCGAAGTCTCCGAAGATAAAGAAAACAAGAAAGCGCGCTGTGAATCCCCTGGTTTGCAAAACACACCCCCCAAGTTTCGACGGCTGCTAAATAAACGTCCGAGATCTACTGAAAGTATACGAAAACCACTGAAGAAAGAATATGCAGAACGTCTGGAGAGCATCTCGGTAGACGATCCGGATGATATGCCAGTGGTAGAAGAGAAGGGAGCTATCAACGGGAAAAATATGACAGGACATGGATTGCTACCCTCAAATGCTCTTTTCCCCCAGTTATGCGTGGACAACGAAGAATTCCCCCCAGAACCACCCGGCCCTGCAGCTACCCCCGTTCGACACGTGGAAATGCATGAATGTTCACCACCTAGAACATTGCTCACCAACACGGAATGTTCGCAGAGAGGCGAGCTGATAGAAACGAGTCTCGGGGAGGAACCCccagtgaaaataaaattggaaaCCCTCCGGTCGTTGGATCAGTCAGACACAATAGACATAGATAGTCATATGTCTAGTCATTCTATGGGTAGTCACAGTGAAGAAGAACAGGGAATGCATACTATGATGATAACTCCTGAGCTAATGGGCCTAATTCCAACATCTAGCTCGCATTCTGAATTAAGCAACGATGGGCACCTACTCAAAAGCAACGGGCATGTAGAGTCCCACAGACATTCCGGTGGGCCTAAAACTTGGACCCAAGAAGACATGGAGCTTGCATTAGACGCCTTAAGGAACCACAACATGAGTTTAACAAAAgcATCAGCAACTTATGGAATTCCTTCTACGACGTTGTGGCAAAGAGCACATCGATTAGGAATCGACACACCAAAGAAAGAGGGCCCTACGAAGTCTTGGACAGAAGATAACTTAAATTCGGCGTTGGAAGCTCTGAGGACCGGGACGATATCTGCCAATAAGGCCAGCAAAGCTTacgGCATTCCTAGTAGCACGCTGTACAAAATCGCCCGCCGTGAAGGTATCCGTTTGGCAGCCCCCTTCAACGCGGCCCCCACAACGTGGAGCCAAGAAGACCTAGAACGCGCGCTAGAAGCAATTAGATCTGGTCAGACTTCTGTGCAAAGGGCGTCCACAGAATTCGGTATTCCCACGGGGACTCTGTATGGTAGATGTAAACGAGAAGGGATTGAATTGTCAAGGTCGAATCCGACCCCATGGAGCGAGGATGCCATGGGCGAAGCGCTGGAAGCCGTAAGAGTTGGCCAGATGTCAATCAATCAAGCAGCTATCCACTACAACCTGCCATATTCGTCGTTGTATGGTCGATTTAAGCGAGGGAAGTATGACACGGAACCCTCAGACCATCCTGAAGGCCCTGGGGATCCAGTCATACAGTACCATTCAGCTCAGGCGCAATTTCAGCACCAAAATAGTTGA
- Protein Sequence
- MASQHYCLRWNNYQSNMTSVFHQLLQTESFVDVTLACNDLSLKAHKVVLSACSAYFQKLLLENPCKHPTIIMPQDVCFSDLKFIIEFVYKGEIDVSQAELQILPELRSNRVAIRRVWFQQDGATAHTARASVDVITDRLISSFGDIHWPPHSPDLSICDFSLWGHLKIRMYKHKPRTLEELKEAILSLLKTADQLKIKGLCEVSEDKENKKARCESPGLQNTPPKFRRLLNKRPRSTESIRKPLKKEYAERLESISVDDPDDMPVVEEKGAINGKNMTGHGLLPSNALFPQLCVDNEEFPPEPPGPAATPVRHVEMHECSPPRTLLTNTECSQRGELIETSLGEEPPVKIKLETLRSLDQSDTIDIDSHMSSHSMGSHSEEEQGMHTMMITPELMGLIPTSSSHSELSNDGHLLKSNGHVESHRHSGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEDNLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSQEDLERALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDTEPSDHPEGPGDPVIQYHSAQAQFQHQNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00766313;
- 90% Identity
- iTF_01104884;
- 80% Identity
- iTF_01104884;