Oven011665.1
Basic Information
- Insect
- Ophion ventricosus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963932345.1
- Location
- OZ010719.1:14550538-14557550[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4e-115 9e-111 370.1 30.2 1 300 29 327 29 327 0.97 2 3 0.0066 1.3e+02 1.8 2.9 122 171 327 376 326 379 0.91 3 3 0.034 6.9e+02 -0.5 5.1 194 237 358 400 340 404 0.57
Sequence Information
- Coding Sequence
- atggagTCGACTATAGCGGGAAGAAGGCGTAACGCTACAAGGCATTCTGCCGAGGATCAGGCACTCGACCAGATAGCCAAAGAGGCAGAGGCGAGACTCGCTGCACGGAGACAGGCCCGTGCTGAAGCACGTGAGATTCGGATGCGCGAATTGGAGAGACAACAAAAAGAAGCAGAGGAGAATGCAGATAGGGTTTACGATATGTGCTCGGCAGAAGGGAACAGAACAATGAGAGTGACGCCAGATCCAGTGAGAACATCACGTATACTCGCAAACGCGAACAATTTTCAGTCGAGTAGAAGATCGTCGGAAGATTCGTTGGAAGATGCAGGATTAAGCAGAGATCTGAGATTAGAGCTGAAAGAATTCGAGGAGAAGTTTAGGAAAGCGATGATAGCGAACGCCCAACTGGAcaacgaaaaatcatcgtacgcGTATCAAGTCGATTTGTTAAAGGACAAGCTCGAAGAGTTGGACGAGACAACTGCTCAACTGAGACGCGAACTGAGGGAAAAGAATAGAGAGGCGGAACAGTTAAAACGTATAAGTCAACGATTAAAGGAAGATTTCGATGTATGCAGAGCTCAATTGTTGGAAAGAGACACTCTTATTCAGGAAAATGGACTGGTCATAGTAGACGATGAGGGTAGCGGAGACGAAGATCCTGAAGCGCTAAATGGATCTTGTTACAGGAAAAGAGTACTAGTCAGCACAGAAGCTGCCGAGTTATTAGAAAATGCTGGCGAAGGTTCGCTAGacgTTCGATTGAGGAAATTTGCTTCCGAAAAGAAGGAACTGCAAGATGAAATTGGGCACTTGAGGTTGGAGCTGGAGGAGGCGAAGAGTCGTTTGAGATCGGAAAAATCTCCAGGTTCCGTATTAGgtgGACTTTCCGATTCCGAGGACGTTCAGAGAGAAACGAACAAATTATTGGCCGATTACAAATTTAAGATGCAAAAAGCTGAACAAGACATGTCCACGTTGCAGGCGACCGTTGCTAGGCTAGAAAGTCAAGTTATACGTTACAAATCCGCAGCCGAAGCGTCGGAAAAGGCGGAAGATGAACTTAAAGTTGAGAAGAGGAAATTACAAAGAGAAgtccgCGAATCGCAAGGTCGTGTTGAGGAACTCGAAACGGCAAATTCCCACTTGCAGAGACGATTGGACAAGCTTAAAAACGCTAAATCCGCGCTCCTCAAAGATGCTTCTCAAAGATAA
- Protein Sequence
- MESTIAGRRRNATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSAEGNRTMRVTPDPVRTSRILANANNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELDETTAQLRRELREKNREAEQLKRISQRLKEDFDVCRAQLLERDTLIQENGLVIVDDEGSGDEDPEALNGSCYRKRVLVSTEAAELLENAGEGSLDVRLRKFASEKKELQDEIGHLRLELEEAKSRLRSEKSPGSVLGGLSDSEDVQRETNKLLADYKFKMQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKDASQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01102050;
- 80% Identity
- -