Basic Information

Insect: Ophion obscuratus
Gene Symbol: -
Assembly: GCA_964007375.1
Location: OZ023312.1:45016512-45028295[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.8e-06 0.00046 21.6 1.7 1 23 336 358 336 358 0.98

2 9 2.7e-08 4.4e-06 27.9 1.6 3 23 366 386 364 386 0.98

3 9 0.00021 0.034 15.7 0.4 1 23 392 414 392 414 0.98

4 9 1.2e-06 0.00019 22.8 1.5 1 23 420 442 420 442 0.99

5 9 2.1e-05 0.0033 18.9 1.7 2 23 571 592 570 592 0.96

6 9 2.6e-09 4.2e-07 31.1 1.6 1 23 598 620 598 620 0.98

7 9 0.0006 0.096 14.3 0.6 3 23 628 648 626 648 0.97

8 9 7.9e-05 0.013 17.0 1.4 1 23 654 676 654 676 0.99

9 9 0.018 2.8 9.7 0.8 1 23 682 706 682 706 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.8e-06	0.00046	21.6	1.7	1	23	336	358	336	358	0.98
2	9	2.7e-08	4.4e-06	27.9	1.6	3	23	366	386	364	386	0.98
3	9	0.00021	0.034	15.7	0.4	1	23	392	414	392	414	0.98
4	9	1.2e-06	0.00019	22.8	1.5	1	23	420	442	420	442	0.99
5	9	2.1e-05	0.0033	18.9	1.7	2	23	571	592	570	592	0.96
6	9	2.6e-09	4.2e-07	31.1	1.6	1	23	598	620	598	620	0.98
7	9	0.0006	0.096	14.3	0.6	3	23	628	648	626	648	0.97
8	9	7.9e-05	0.013	17.0	1.4	1	23	654	676	654	676	0.99
9	9	0.018	2.8	9.7	0.8	1	23	682	706	682	706	0.95

Sequence Information

Coding Sequence: ATGTCAAGGTCAGGCCTGTACAAAGTGCTACCCCTATTCGGAATATTTAGCCTCCCGACTCAAGACAGTAACCCCAAAGCTTTCGCGGGAATTCGCAGTGAGGCTTCGGATACTGGCGCGCCATACGTCTTGTACAAGGACAATATGGAGAGGCCCCAGGGCCAATGGCCCTCGGGACCGGGAGCTCTCCAGGACAGCGGTCTTTACGCccaacagcagcaacagcagcagcagcagcagcaacagcaacagcaacagcagcaacaacagcagcagcaacagcagcagcagcagcaacagccgCAGGGCTCATCGTCCTCGGGTAGTCCACAGCAGGCATGTGGTCCACCGGTCGAGGGTGAAACGGGGCCGCCTCCGACGTTAGCTTCACCGGTTGCCTCGCCCTATCCGTCAACCGCCCCGGAGCCCCAGTCCCTCTCGCCTCCCGACGACGACATACAATCCAATCAATCGTCCGcccagcagcagcaacagcagcagcagcagcagcagcaacaacaacaacaacaacaacagcagcaacagcagcaggtccagcaacaacagcaacagGTCCAGCAGacgcaacagcagcaacaacagcagcaacaacagcagcagcaacagcaacaacagcagGGCCAGCAAGGGCAGGAACACTCGCCGCAGCAGCAGTTGACGCCTCACGAGGTCGAAAGAAGCGACTGCTTTCCCGGGGGCGCGGATCTTCAACAATATCCTCAACATTACTTCAAAGAGGCACGTCCTCATCCCTCGCCCTCGGTCCCACCTCACATGCTGACACCCGGCGGCTTCTCAGCACTTCACTATCTCAAGCAACCGGGCGTTATGCTGACGTCCCTCGGCCAGGGCGACGGCGGACCGGGCCTCGACGGACACCAGTACGGTAGTCCCGGTGGGCCCAACATGGGCGCAACCGGTTTACCCGATATCGTTCAGCAGAACGGCAAGAGCGGCAAAGGCGCGAACAGCGATTTACGCCTGTTCAAGTGTCTCACGTGCGGCAAGGACTTTAAGCAAAAGTCGACGTTGCTACAGCACGAGAGGATTCACACGGACAGCCGACCTTACGGTTGTCCCGAGTGCGGCAAACGCTTCAGGCAACAGTCACACCTTACGCAACATCTCCGAATACACGCTAACGAGAAGCCGTACGCTTGCGTTTACTGCGAGCGCACGTTTCGCCAGCGCGCCATCCTCAATCAGCATCTGCGCATACACTCGGGTGAGAAGCCATACCAATGTCCGGAGTGCGGAAAACACTTCCGTCAGAAGGCGATCCTGAATCAGCACGTCCGCACACACCAAGACGTGAGTCCACATCTGATATTCAAAAACGGAATGACCCCGACGCTCTGGCCGCAGGACGTGCCGTTTCCACCGGAGGAGGGCAAGGAGGAGGTCGCCTCGACGTTCGGCGACGGGGACACGCAATCGGGGGCTTTCAGTCCGTCGCCCGACGGCAATTCGATACAATATCCGGCGTACTTCAAGGACCCGAAGGGCGGCAATCACGGTGTTTTCGGGGCGGGCGGACCGAGCAGTTTCGGGGCCCTGCAATATATaaaacaacagcagcaacagcagcagcagcagcagcagcaaggGGGTGGGGCGGGAGCCGGTGGAAAATCTTGTCTTCCGGACGTGATACAGCACGGGCGTTCGGCGGGTATGCCTTTGTACGTACGTTGTCCGATATGCCAGAAGGAATTCAAGCAAAAGAGCACGCTACTGCAGCACGGTTGTATACACATAGAATCGAGGCCGTATCCTTGCCCCGAGTGCGGCAAGCGATTTCGTCAACAGTCACACTTGACGCAACACTTGCGCATACACACGAACGAAAAACCATACGGTTGCGTATACTGCGGAAGAAACTTTCGTCAGCGCACGATATTGAATCAACATTTGCGCATACACACGGGTGAAAAGCCATACAAGTGTCAGCAGTGCGGTAAGGATTTTCGTCAAAAAGCTATATTGGATCAGCACACGAGAACGCATCAGGGTGATAGACCATTTTGTTGTCCAATGCCGAATTGCAGACGACGCTTCGCCACCGAACCCGAGGTCAAGAAACACATCGACAATCACATGAATCCACACGCTACTAAGGCACGAAGAAATTCCAGTAGCGAGACTAAACCGCCCAATACGCCGACCGGATTGGGTCCTGTGCCAGCTGTGTCGCGGGGTTTGACGCCCGCGGTCGTTAAGCCCGAATTGTACTTTCCACAGTGTTACGCACCGGCGTTCAATCATCATCCGCCCGTATCGACGACGCAATTCTCGGTCGGACAGTCGAACGGGGTTGTCGCCGGTGGTGTCGGTGGTGCAGGAAGTGAATTCAAACCACCCACGGGACTTCCGCCTCAGTGA
Protein Sequence: MSRSGLYKVLPLFGIFSLPTQDSNPKAFAGIRSEASDTGAPYVLYKDNMERPQGQWPSGPGALQDSGLYAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQGSSSSGSPQQACGPPVEGETGPPPTLASPVASPYPSTAPEPQSLSPPDDDIQSNQSSAQQQQQQQQQQQQQQQQQQQQQQQQVQQQQQQVQQTQQQQQQQQQQQQQQQQQQGQQGQEHSPQQQLTPHEVERSDCFPGGADLQQYPQHYFKEARPHPSPSVPPHMLTPGGFSALHYLKQPGVMLTSLGQGDGGPGLDGHQYGSPGGPNMGATGLPDIVQQNGKSGKGANSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPFPPEEGKEEVASTFGDGDTQSGAFSPSPDGNSIQYPAYFKDPKGGNHGVFGAGGPSSFGALQYIKQQQQQQQQQQQQGGGAGAGGKSCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHLRIHTGEKPYKCQQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHATKARRNSSSETKPPNTPTGLGPVPAVSRGLTPAVVKPELYFPQCYAPAFNHHPPVSTTQFSVGQSNGVVAGGVGGAGSEFKPPTGLPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00214532;
90% Identity: iTF_00629286;
80% Identity: -