Basic Information

Insect: Ophion obscuratus
Gene Symbol: -
Assembly: GCA_964007375.1
Location: OZ023312.1:40723214-40727325[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00029 0.046 15.3 3.9 1 23 246 268 246 268 0.98

2 11 0.031 5 8.9 12.0 1 23 274 296 274 296 0.95

3 11 6.7e-05 0.011 17.3 6.6 1 23 302 324 302 324 0.99

4 11 0.00046 0.074 14.6 1.6 1 23 330 352 330 352 0.95

5 11 1.4e-06 0.00023 22.5 1.9 1 23 358 380 358 380 0.97

6 11 3e-05 0.0048 18.4 1.1 1 23 386 408 386 408 0.97

7 11 8.8e-05 0.014 16.9 1.6 1 23 413 435 413 435 0.97

8 11 4.8e-05 0.0077 17.7 0.0 1 23 441 463 441 463 0.96

9 11 4.6e-05 0.0074 17.8 0.2 2 23 475 496 474 496 0.96

10 11 5.9e-06 0.00095 20.6 2.5 3 23 564 584 562 584 0.96

11 11 5e-05 0.0079 17.7 4.6 1 23 594 616 594 616 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00029	0.046	15.3	3.9	1	23	246	268	246	268	0.98
2	11	0.031	5	8.9	12.0	1	23	274	296	274	296	0.95
3	11	6.7e-05	0.011	17.3	6.6	1	23	302	324	302	324	0.99
4	11	0.00046	0.074	14.6	1.6	1	23	330	352	330	352	0.95
5	11	1.4e-06	0.00023	22.5	1.9	1	23	358	380	358	380	0.97
6	11	3e-05	0.0048	18.4	1.1	1	23	386	408	386	408	0.97
7	11	8.8e-05	0.014	16.9	1.6	1	23	413	435	413	435	0.97
8	11	4.8e-05	0.0077	17.7	0.0	1	23	441	463	441	463	0.96
9	11	4.6e-05	0.0074	17.8	0.2	2	23	475	496	474	496	0.96
10	11	5.9e-06	0.00095	20.6	2.5	3	23	564	584	562	584	0.96
11	11	5e-05	0.0079	17.7	4.6	1	23	594	616	594	616	0.96

Sequence Information

Coding Sequence: ATGTGCACGACGCCTGGCAATGCGGGCGCCGGTTTCGGCTACGCGTGGTCGTTCAGCGGCCCGGGTACCGAGACCAGGGAGAATTCCCAGGCGGATCTAGCTGCCAACATCAATTACGCGGTCAACAACAATCAAGATCAAGGCTCCGGACAGAAGATTCAGGTGGACATTAAGCCGGCGAAGGTAGCTATAAGCGCGACACCTCGCAGGCCAATGTTCTCCATGAACGAGAGTTGCCAACAGACACCAACGACGACGACGCATCACGGACACACCGCGGTAGGTCACAATCAGTCTCATGTCAGAACAAAGAAGCATCACGACGTTTTTTCCCTGACCTGCGACAAGGGAGGTTGCAACTGCGACGCGGCGCATCCAACGCCGCCGCCTTCGCTGTTCTCCAACGCGCTGGTCTTTACAACGGCGGACAAGCACGCTATGAGCAAACACTTCATGACGCCGCTGGGACCTCTTCAACTGACCGCCGAGGAGTGCAACGAGATACTCATGAAGAGAGCGGCGGCTGCCTCCAATCAGCCCAACTCCAACAACGTGGCGACCAGTCAGGCGGATGGCGGaggtggcggcggcggcggcggcggtgcCAGCGCCGGCGGTGGTTCGCACTTCGGTCACGTGCTGAGTCACGTCAACACGACGCAGATCGAGCCGTCCAAGGTGGTGAAGCAACAGCAGGACATGGCCAGCCAGGTGCGAGTCCCCAAGGAGAGGCCCTACTCTTGCTCCGAGTGCGGCAAGTCCTTCCTACTCAAGCATCATCTGACGACTCACGCGCGGGTACACACGGGCGAGCGTCCCCACATATGCGTACACTGCGGCAAAACATTCGCTCACAAACACTGTCTACACACTCATCTCTTGCTACACAGCGCGGAGAGACCCTATCAGTGTCGcgaatgcaaaaaatcgtttaCCCTGAAGCATCATTTGGTGACGCACACGCGCGTTCACACCCGCGAAAGACCGTTCGTTTGTCAGGAGTGCGGACGCGCGTTTCCCCTGAAGCGTCATCTCGTGACGCATAGTAAATTTCACTCGGGCGAGAGACCCTTCGTATGCGAAGAGTGCGGCGAGTCCTTCTCCCAGAAGGATCATCTCACGATGCATTCGCGCTTCCACGGTAGCTTACATCCGTTCGTTTGTCACGATTGCGGTGCTACCTTCCAGAGGAAATTCGAGCTCGTCAATCACGGGCGTCTCCACGGACGCGTGCCCCATTCTTGTACCGTTTGTGGCAAGGAGTTCCTCCAGAAGAGAACGCTTCTCGCTCATATGCGTCTGCACACCGGTGAAACACCCTTCGCCTGTACCGTATGCGGCGAGGCTTTCCCGCGCAAGGTCGAACTCGTCGCCCACTCCAAGATACACAACAACAATACCAACCCGGATGAGAAATGTCTCACGTGCAGGGAATGTGGTTTGGATTTTTCGAATCGGGAGGCACTCACGTTGCACTTGAGGTTACACTCGGGCGATCGTACTCTCGTCACCGACCTTTGCGGACTAGCCGCGGCCTTTCAACAAACGCCAGGACACTTTTTAACGCCAAACGCCACTGGCACTCATCAGATGAACGGGCCACTCGGTGCGCCGGGGGTGAGTCACATGCACGGAGCGACGCAGACCTCGCCGCCGGTGTGTTCGGGCCCGAAGCCGAAGCCGCATCTATGCCCGGATTGCGGTCGCGGTTTTGCCCAGAAGCACGGCCTCTCCCAGCACCAGAGAAGACACACGGACGGGAGTTGTCACATAAGATCGCACATTTGCGACAAGTGCGGCAAGGCCTTCTTTCAGAAGAATCACTTGCTGTTGCACCAGCGCCAGCACATGGATCCACCGCCGAGTATACTGCGACAGCAACAGAGACAGGCCGCTCAGGCGGCTGCTCAGCAGGCCCAGCAAGCgcaacagcaacaacagcaggtccagcaacagcagcagggCTCTAGCCAGCAGGCCCAGCAGCAGGCCCAGGTACAACAGCAAgcacagcagcaacagcagcaggtACATCAGCAGgcccaacaacaacagcaaGTCCAACAGCAAGCCCAGCAACAGGCATGCACCGTAGACGCCAAGTCGATACAGCTCCAGGCGATACAGCAACAGGTACAACAACAGGTACAGCAGCAagtgcagcagcagcaacagcagcaacaacaacagcaacaacagcagcagcagcagcagcaacaacaggcGTGCTCGGTGGACGCAAAAGCAATACAATTGAACGTCACCATGTGA
Protein Sequence: MCTTPGNAGAGFGYAWSFSGPGTETRENSQADLAANINYAVNNNQDQGSGQKIQVDIKPAKVAISATPRRPMFSMNESCQQTPTTTTHHGHTAVGHNQSHVRTKKHHDVFSLTCDKGGCNCDAAHPTPPPSLFSNALVFTTADKHAMSKHFMTPLGPLQLTAEECNEILMKRAAAASNQPNSNNVATSQADGGGGGGGGGGASAGGGSHFGHVLSHVNTTQIEPSKVVKQQQDMASQVRVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICVHCGKTFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPFVCEECGESFSQKDHLTMHSRFHGSLHPFVCHDCGATFQRKFELVNHGRLHGRVPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKVELVAHSKIHNNNTNPDEKCLTCRECGLDFSNREALTLHLRLHSGDRTLVTDLCGLAAAFQQTPGHFLTPNATGTHQMNGPLGAPGVSHMHGATQTSPPVCSGPKPKPHLCPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHICDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQQAQQAQQQQQQVQQQQQGSSQQAQQQAQVQQQAQQQQQQVHQQAQQQQQVQQQAQQQACTVDAKSIQLQAIQQQVQQQVQQQVQQQQQQQQQQQQQQQQQQQQQACSVDAKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509061;
90% Identity: iTF_01056261;
80% Identity: -