Oobs001394.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ophion obscuratus
Gene Symbol
-
Assembly
GCA_964007375.1
Location
OZ023312.1:28375606-28389187[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.13 21 6.9 0.1 1 21 119 139 119 142 0.89
2 26 0.035 5.7 8.7 0.1 2 23 198 219 197 219 0.96
3 26 0.00079 0.13 13.9 3.6 1 23 225 248 225 248 0.96
4 26 0.012 1.9 10.2 2.2 1 23 253 276 253 276 0.93
5 26 0.16 25 6.7 0.1 1 23 281 304 281 304 0.94
6 26 6.2e-06 0.00099 20.5 0.2 1 23 319 341 319 341 0.98
7 26 0.00011 0.017 16.6 0.2 1 23 347 369 347 369 0.97
8 26 7.4e-06 0.0012 20.3 0.1 1 23 375 397 375 397 0.98
9 26 8.8e-05 0.014 16.9 1.4 1 23 522 545 522 545 0.95
10 26 0.036 5.7 8.7 0.3 1 23 551 574 551 574 0.92
11 26 0.02 3.2 9.5 0.2 2 23 630 651 629 651 0.96
12 26 0.00016 0.025 16.1 1.8 1 23 657 680 657 680 0.95
13 26 0.012 1.9 10.2 2.2 1 23 685 708 685 708 0.93
14 26 0.16 25 6.7 0.1 1 23 713 736 713 736 0.94
15 26 6.2e-06 0.00099 20.5 0.2 1 23 751 773 751 773 0.98
16 26 7.3e-05 0.012 17.2 0.3 1 23 779 801 779 801 0.97
17 26 7.4e-06 0.0012 20.3 0.1 1 23 807 829 807 829 0.98
18 26 8.8e-05 0.014 16.9 1.4 1 23 961 984 961 984 0.95
19 26 0.036 5.7 8.7 0.3 1 23 990 1013 990 1013 0.92
20 26 0.02 3.2 9.5 0.2 2 23 1069 1090 1068 1090 0.96
21 26 0.00016 0.025 16.1 1.8 1 23 1096 1119 1096 1119 0.95
22 26 0.012 1.9 10.2 2.2 1 23 1124 1147 1124 1147 0.93
23 26 0.0007 0.11 14.1 0.2 1 23 1152 1175 1152 1175 0.96
24 26 6.7e-06 0.0011 20.4 0.2 1 23 1190 1212 1190 1212 0.98
25 26 7.3e-05 0.012 17.2 0.3 1 23 1218 1240 1218 1240 0.97
26 26 7.4e-06 0.0012 20.3 0.1 1 23 1246 1268 1246 1268 0.98

Sequence Information

Coding Sequence
ATGACCGATCATATAATCGACGGCCAAGTGCGTACCAGAAAGCTCATAGGCAAATCGGTAACGTCGAATAAAAGCGAAGTGAGCAGCAACGGATACGTCGATTGTTCGACTACGACGACAATCACGCCTTCGTCGTCGATCACGGTCGAGCGCGAGGATGAGGATGTGAAAGACGGAGGAAAGGAAATTTGCGACGACGACAACTACACGATATTGCCATTTTGCGAGGTCAAGATATACGACGATGAGGAGGCTCCCTGTGCCGACGAGGACGACGGACTCGTTCAACCAAACGGCAAGAATGATGTTtctggtgattacttcaccgagACAATACCCGAGGCGATACAGTGCTTCAGGTGTAAGATATGCCTCGAGACGTACAACAATGCGTTGGCTTTCGAGTCACATGTGGTTGCGGAGCACGCTCCCGACATCGACAATAGCGACGAATTCCTGGAGAAGATTACCCTTTATCGAGTCTCTTGCGGTACCTCGTACCACACAAAAGTCAAGAGAAATCCCGATGCGCAACGCAACAACGAGGCCGGTCATGTGACCACGAGCTTCGAGAAGAAATCGAACGTGCTCTCGTGCAGTCAGTGCGACTACGAATCACCGAGCAAACGTTCCCTCGCGGTTCACGTCGCCAAACACGTCGAAAATGGTAAATTCGCGTGTAATACGTGCGGTCGTAGTTTCAAGAGCCGTCCCAAGCTCAAATGTCACATGAGGCTCAGTCATCGCGAGCAGAATCACATATGCGACGTTTGCGGGCGAATATATCGGGGCGCCAAGACTCTCCACAATCATCGTAAATTCGTACACTTCGGTGGTAAATACGATTGCAAGGCTTGCGGTCGTTTGCTCGCGAGCCAAAAGAATCTCGATTCTCACGTGGCGAAAGTTCACAACGAGAATCGACCGCCGAAAGAGGTGAAAACAACGAAAAACTTTGTATGCGACGCTTGCGGCAAAGTATTGTCACGTTCCGACAAATTAAAGATGCACATGAGAGTACACAACGGCGAGAAACCCTACGTATGCGCCATTTGCAAAGAATCGTTCGCCAAAAATAACTCCCTGAGGCAACACTTGATTTTGCACACCGGTGCTAAACCCTACGTGTGCGACATATGCGGCAAGGCCTTCGCTCAGAAACCCGGCCTCACCGGACATCGCAAATCACATCCGGGCCAACTTCCGCCCTTGCCACCGGTCTTCATCGATCCCATTATCGACGACCTCCTACGACAGCGATCTTTGAGGATTCGGCGTTCGCATCCGCATTTAGAGGTGACGCCGAATAAGAGCGAAGAGAGCAGCAACAGGTACGTCAGTTGTTCGACAACGACACCGACCACGTCACCGCTGTCGATCAAGGTCGAGCGTGAGGAGGTGGAAGATGATGATGAGGATATTTGCGACGACGAGAACGACACGATATTGCCATTTTGCGAGGTCAAGATAAGATACGACGATGAGGAGGCTCCCTGTGCCGGCGAGGGCGACGAGCTCGTTCATCtgaacgacgacaacgacgaggaCGATGTTTTCGGTGATTATTCCTGTCAAAAGTGCAACATCTACTTCACTACTTGGAACATGCTCAAGAGACACACGAAGGCGGTACACGAGGCGATACAGTGCTTCAAGTGTAAGATATGCCTCAAGGTGTACAACAAAGCGTTGGCTTTCGAGTCACACGTGGTCTCGGAGCACGGTACCGGTCTCGATTGTACCGACGATTTCTTGGAGAAGCTCACCCTTTATCGAGTCTCGCGCGGTACCTCGTTCTACACAAGGGTCAAGAGAAATCACGATGCGCGATGCAATAACAACGCCAGCCACGTGACCACGAGCTTCGAGACGAAATCGAACGTGCTATCGTGCAGTCAGTGCGACTACAAATCACCGAGCAAACGTTCTCTCGCGGTTCACGTGGCTAAACACGTCGAAAATGGTAAATTCGCGTGTAAAACGTGCGGTCGTAGTTTCAAGATACGTCGCGAGCTCACCTATCACATTAGGTTCAGTCATCGCGAGCAGAATCACATATGCGACGTTTGCGGGCGAATATATCGGGGCGCCAAGACTCTCCACAATCATCGTAAATTCGTACACTTCGGTGGTAAATACGATTGCAAGGCTTGCGGTCGTTTGCTCGCGAGCCAAAAGAATCTCGATTCTCACGTGGCGAAAGTTCACATCGAGAAACGACCGCCGAAAGAGGCGAAAACAACGGAAAACTTTGTATGCGACGCTTGCGGCAAAGTATTGTCACGTTCCGACAAATTAAAGATGCACATGAGAGTACACAACGGCGAGAAACCCTACGTATGCGCCATTTGCAAAGAATCGTTCGCCAAAAAGAACTCCCTGAGGCAACACTTGATTTTGCACACCGGTGCTAAACCCTACGTCTGCGACATATGCGGCAAGGCCTTCGCTCAGAAACCCGGCCTCACCGGACATCGCAAATCACATCCGGGCGAACATCCGCCCTTGCCACCGGTCTACATCGATTCCATTATCGACGACGTCCTACGTCAGCGATCTTTGAGGATTCAGCGTTCGCATCCGCATCTAGAGGTGACGTCGAATAAGAGCGAAGAGAGCAGCAACAGGCACGTCAGTTGTTCGATGACGACACCGACCACGTCACCGTTGTCGATCAAGATCGAGCGGGAGGAGGAGGATGAGGAGGAGGCGGAAGAAGAGGACGAAGACGAGGAGATTTGCGACGACGAGAACGACACGATATTGCCATTTTGCGAGGTGAAGATAAGATACGACGATGAGGAGGCTCCCTGTGCCGACGAGGGCGACGAGCTCGTTCATCTGAacgacgaaaacgacgaggacgATGTTTTCGGTGATTATTCCTGTCAAAAGTGCAACATCTATTTCACTACTTGGAACATGCTCAAGAGACACACGAAGGCGGTACACGAGGCGATACAGTGCTTCAAGTGTAAGATATGCCTCAAGGTGTACAACAAAGCGTTGGCTTTCGAGTCACACGTGGTCTCGGAGCACGGTACCGGCCTCGATTGTACCGATGATTTCTTGGAGAAGCTTACCCTTTATCGAGTCTCGCGCGGTACCTCGTTCTACACAAGAGTCAAGAGAAATCACGATGCGCAACGCAATAACAACACCAGCGATGTGATAATCAGCTTCGAGAAGAAATCGAACGTGCTCTCGTGCAGTCAGTGCGATTACAAATCACCGAGCAAACGTTCCCTCGCGGTTCACGTCGCTAAACACGTCGAAACTGGTAAATTCGCGTGTAAAACGTGCGGTCGTAGTTTCAAGATACGTCGCGAGCTCACCTATCACATTAGGTTCAGTCATCGCGAGCAGAATCACATATGCGACGTTTGCGGGCGAATATATCGGGGCGCCAAGACTCTCCACAATCATCGTAAATTCGTACACTTCGGTGGTAAATACGAGTGTAAGGTATGCGGTCGTTTGCTCGCGAGCCAGAAGAATCTCAATTCTCACGTGGCGAAACTTCACGTCGAGAAACGACCGCCGAAAGAGGTGAAAACAACGGAAAACTTTGTATGCGACGCTTGCGGCAAAGTATTGTCACGTTCCGACAAACTAAGAATGCACATGAGAGTACATAACGGCGAAAGACCCTACGTATGCGCCATTTGCAAAGAATCATTCGCCAAAAAGAACTCCCTGAGGCAACACTTGATATTGCACACAGGTGCTAAACCCTACGTGTGCGACATATGCGGCAAGGCCTTCGCTCAGAAACCCGGCCTCACCGGACATCGCAAATCACATCCGGGCGAACATCCGCCCTTGCCACCGGTCTACATCGATTCCATTCTCGACGACGTCCTACGACAGTGCGAACAATAA
Protein Sequence
MTDHIIDGQVRTRKLIGKSVTSNKSEVSSNGYVDCSTTTTITPSSSITVEREDEDVKDGGKEICDDDNYTILPFCEVKIYDDEEAPCADEDDGLVQPNGKNDVSGDYFTETIPEAIQCFRCKICLETYNNALAFESHVVAEHAPDIDNSDEFLEKITLYRVSCGTSYHTKVKRNPDAQRNNEAGHVTTSFEKKSNVLSCSQCDYESPSKRSLAVHVAKHVENGKFACNTCGRSFKSRPKLKCHMRLSHREQNHICDVCGRIYRGAKTLHNHRKFVHFGGKYDCKACGRLLASQKNLDSHVAKVHNENRPPKEVKTTKNFVCDACGKVLSRSDKLKMHMRVHNGEKPYVCAICKESFAKNNSLRQHLILHTGAKPYVCDICGKAFAQKPGLTGHRKSHPGQLPPLPPVFIDPIIDDLLRQRSLRIRRSHPHLEVTPNKSEESSNRYVSCSTTTPTTSPLSIKVEREEVEDDDEDICDDENDTILPFCEVKIRYDDEEAPCAGEGDELVHLNDDNDEDDVFGDYSCQKCNIYFTTWNMLKRHTKAVHEAIQCFKCKICLKVYNKALAFESHVVSEHGTGLDCTDDFLEKLTLYRVSRGTSFYTRVKRNHDARCNNNASHVTTSFETKSNVLSCSQCDYKSPSKRSLAVHVAKHVENGKFACKTCGRSFKIRRELTYHIRFSHREQNHICDVCGRIYRGAKTLHNHRKFVHFGGKYDCKACGRLLASQKNLDSHVAKVHIEKRPPKEAKTTENFVCDACGKVLSRSDKLKMHMRVHNGEKPYVCAICKESFAKKNSLRQHLILHTGAKPYVCDICGKAFAQKPGLTGHRKSHPGEHPPLPPVYIDSIIDDVLRQRSLRIQRSHPHLEVTSNKSEESSNRHVSCSMTTPTTSPLSIKIEREEEDEEEAEEEDEDEEICDDENDTILPFCEVKIRYDDEEAPCADEGDELVHLNDENDEDDVFGDYSCQKCNIYFTTWNMLKRHTKAVHEAIQCFKCKICLKVYNKALAFESHVVSEHGTGLDCTDDFLEKLTLYRVSRGTSFYTRVKRNHDAQRNNNTSDVIISFEKKSNVLSCSQCDYKSPSKRSLAVHVAKHVETGKFACKTCGRSFKIRRELTYHIRFSHREQNHICDVCGRIYRGAKTLHNHRKFVHFGGKYECKVCGRLLASQKNLNSHVAKLHVEKRPPKEVKTTENFVCDACGKVLSRSDKLRMHMRVHNGERPYVCAICKESFAKKNSLRQHLILHTGAKPYVCDICGKAFAQKPGLTGHRKSHPGEHPPLPPVYIDSILDDVLRQCEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103221;
90% Identity
iTF_01103221;
80% Identity
iTF_01103221;