Oobs005430.1
Basic Information
- Insect
- Ophion obscuratus
- Gene Symbol
- -
- Assembly
- GCA_964007375.1
- Location
- OZ023313.1:32246751-32248463[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 2.2e-09 38.0 0.0 2 36 16 51 15 54 0.92
Sequence Information
- Coding Sequence
- ATGCCGAAGCTCGTGGAAGGTACGAAGTACACCAAGAGATACAGCGAGGAAAATGTGCGCAAGGCACTCGAGGCGGTACAGGAGGACGGAATGTCGGTTCGCAAGGCGGGCCAACTGTTCGGGGTGCCAAGGGCAACAATACAATTTAGACGAAGCAGTCAATTCAAGAACAAAACGACGCTGGGGCCTAGTCCGATACTGACTGCGGAGGAAGAGGATACGTTGGAAAAGTGGATCCTGGCGAAGCATCGCAAAGTGTGTCCGAGGAGAAAGGAAGCTATTCAAGCATCGGTGAAGGACATGCTGGAGGCGAATCCGAGGGCTAATCCGTTCAAGGGTAACAATCCGGGGGACGGTTGGTACAAGGCTTATCTGAAGCGTCATCCGAACTTGAAGGTGACTACCACGGCTGCCAAGGGTACGGGAAAGGACATACGCAATTGGTTCGCCAATATCGAGGAGTACCTGGGCGAAGCTGGCTACTCGAATATACTGCAGGATCCGTCTAGGATATTTCTCGCGGACGAGACGAATTTCGAGTTGTGTCCGAAGAACAACAAAGTTCTGGCGCCTCGGGAGGTGAGAAACGTCGAGGAGATCGAGGGAGCTTTGCCAAAATCGAATATATCGGTGATGTTCACGTTTTCGGCTTCGGGCTACGAGACACCGCCCATGGTCGTTTATCCCTACAAACGCTTGCCCACGGACATCGTCAAGTCCGTGCCGCAAGATTGGGGCATCGGCTGTACGGAGAACGGTTGGATGAAGTCCGAGGTCTTTTACGATTACGTCAGGAGCGTACTGTTGCCATCGTTGCAGAAGAAAGGCGTCATGTTCCCAATAATATTGTATCTCGACGGTCACAGTAATCACGTGACTTATCGAGTTAGCCAGCTGTGCATGGAGCTCAATATCATTCTCGTGAGCCTTTATCCGACTATGTCGCGCTTCCTGAAGCCCGCCGAGATATCGACCCTCAAGCCCCTCAAGACAAGCTGGAAAAAAGGCGTTCTCGAGTTCCAACGGAAAAATCCTCTCGAGGTGATAACCAAGGAGAAGTTCGCGCCTCTGCTCTCGTCGTTGCTTAGCTCAGGCGTGACCACCGACACAGCCAAGGGCTTTCGCACGTGGGGCATCTATCCGTGGAATCCGAGCGCTATCGATTACACAAAGTGCATCGAGAGAAACAACAAGAAGTTCCATCAGGGCACCGTCGAGAAGCGCGAGTATCGTCACTCGAATACTTTCATATCGTGGGAGGAGTTCGAGAAGATCGTCGGTACGAGAAGACTCGAGACTTTTCGCGGTGTCGACGACGCTATCGAGGACGATCCCGAATACAGATACGAGAATTGCTTCACCGAGATGGGCGAGCTTACCCTCTATCATCTCTATCGTcaatttcgcacgaaaaaaccAACGCCCAATAATTACGCGCTTATCAATCCCGCCGGTAGCAGCGGAAGTGGCACTGGTAACGGTAACAACGCTCCCGGTTCTGCTAATAATGGCAATGCcagtaataacaacaataatccaACCACAAGCAACGTCGAGCCGACCATTCACGACGGTCATCATTTCGTCGCCGATACACATCCCACCGATCACTTGGAATTTCTCTATCGTCCCCATCCAGCGGACATACCCGCCGCTGCCAACAATTTCGTACCTGGTGCCGGTAATATGTACAACAACAATGCGTTTCCTTAA
- Protein Sequence
- MPKLVEGTKYTKRYSEENVRKALEAVQEDGMSVRKAGQLFGVPRATIQFRRSSQFKNKTTLGPSPILTAEEEDTLEKWILAKHRKVCPRRKEAIQASVKDMLEANPRANPFKGNNPGDGWYKAYLKRHPNLKVTTTAAKGTGKDIRNWFANIEEYLGEAGYSNILQDPSRIFLADETNFELCPKNNKVLAPREVRNVEEIEGALPKSNISVMFTFSASGYETPPMVVYPYKRLPTDIVKSVPQDWGIGCTENGWMKSEVFYDYVRSVLLPSLQKKGVMFPIILYLDGHSNHVTYRVSQLCMELNIILVSLYPTMSRFLKPAEISTLKPLKTSWKKGVLEFQRKNPLEVITKEKFAPLLSSLLSSGVTTDTAKGFRTWGIYPWNPSAIDYTKCIERNNKKFHQGTVEKREYRHSNTFISWEEFEKIVGTRRLETFRGVDDAIEDDPEYRYENCFTEMGELTLYHLYRQFRTKKPTPNNYALINPAGSSGSGTGNGNNAPGSANNGNASNNNNNPTTSNVEPTIHDGHHFVADTHPTDHLEFLYRPHPADIPAAANNFVPGAGNMYNNNAFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00798497;
- 90% Identity
- iTF_01101972; iTF_01100504; iTF_01101243; iTF_01103467; iTF_00798497; iTF_00266378; iTF_01299084; iTF_00262576; iTF_00265599; iTF_01508782; iTF_00439387; iTF_00829408; iTF_00828699;
- 80% Identity
- -