Olut013677.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ophion luteus
Gene Symbol
RREB1
Assembly
GCA_944452655.1
Location
CALYBV010001422.1:12317-25188[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00078 0.096 13.8 0.0 1 23 64 86 64 86 0.98
2 16 0.00018 0.022 15.8 0.3 1 23 100 122 100 122 0.98
3 16 6.4e-07 7.8e-05 23.5 2.8 1 23 128 151 128 152 0.97
4 16 0.024 3 9.1 0.4 1 23 259 282 259 283 0.93
5 16 3.9 4.8e+02 2.1 2.8 2 23 289 311 289 311 0.91
6 16 6.8 8.3e+02 1.4 0.6 1 13 369 381 369 388 0.78
7 16 0.025 3 9.1 0.1 1 23 509 531 509 531 0.97
8 16 6.1e-05 0.0074 17.3 0.3 1 23 540 562 540 562 0.98
9 16 0.0054 0.65 11.1 3.1 1 23 568 591 568 591 0.97
10 16 0.00048 0.059 14.4 3.0 1 23 1029 1052 1029 1052 0.97
11 16 0.00069 0.084 13.9 0.1 3 23 1366 1386 1364 1386 0.97
12 16 0.96 1.2e+02 4.1 6.5 1 23 1392 1415 1392 1415 0.97
13 16 0.019 2.4 9.4 1.8 1 23 1474 1498 1474 1498 0.95
14 16 0.57 69 4.8 3.1 1 23 1641 1664 1641 1664 0.96
15 16 0.012 1.4 10.1 0.4 2 23 1716 1737 1715 1737 0.94
16 16 1.4 1.7e+02 3.5 8.2 1 23 1743 1765 1743 1765 0.98

Sequence Information

Coding Sequence
ATGCGGTTTTGTGTATTCGGAATCTCGCCGACTGGATATGTGAAGACTACGACGACAGCAACAGCAACAGCAGCCGGGACGGCGGTAACCGAGCAACCCGAGATCCGACCTAACCATCGATACAGCAGCGAAACAGCCACAGATGCAGCATCCTCCCCATTGACATCGGATCAGCAGGACACCACAGCGTATCCCTGTCCAGCCTGTCCAATAGTGGTGACAACGTCGCGCGATCTGACGAATCACCTGCGAGGCCACAATTCCCCCCGGAGTACCGATTACAGCGGCGAGGACGATTATTCCTGTGGGGTTTGTCACAAGGTGCTGAGCTCCGCGAGTTCCCTGGACCGTCACGTTCTCGTTCACTCGGGCGAGCGTCCCTTCAAGTGCAAATACTGCGACATGGCGTTCACGACTAACGGCAACATGAATCGTCATCTGCGAACGGCCCATCACGGGGCGTCGCCTCGCGACAACAGCGCCTACACGGATTCCGAGGGTAGCAGCGATTCCGAAAAGTCCGCTACCAAGAGACGTCACGATGCCTCGATCGAGCAAGAGTACAACAACAACGAGATCGGCAAGAGCGCAACCGCCGATCATCTCTTCAGCCAGCACGAGTCCTCCTCCCCCACGAGATTCACGGCGAAGCGCAAACGCTCCGAGATCACCGAGGACGCGGAAAATCCCGCGAGAAAGCACAAAATAATGTTGGGCAACTCGCGCACCGAATTGCAAAATGGCGACGGGAGAAACGAGACGCGCACGGTCGTTCACAATTGTCCGGTGTGCGGAAGATTGGACTTTGCGACGAGCGCCCTGCTGGAGGCCCATCTCGAGCGTCATCATCCGGAATTCCCGGCAAAGTGCGATCCCTGCAATCTCTCGTTCAAGAACCATCGCGTTCTCAATCTCCACAAATACATGAAGCACATAGACGGGGAGAACAGCTCGGTCGATAACAACGGCCGTAACTTGCGCAATTCGGTGGTCGGGTTCAACGATTTGACGTTTGTCGACTTTTCGTCGGATAAGTTTCCGGCGATAGCGCGAGCCGTATGCGAGCAATCGCTCCATCGTCCCGCGTCCGGTGAGATCGCGAGATTCCAGTGTGACAAGTGCCTACGAGCGTTTCCCTGTCGTTCGGCCCTCGACGGCCACGAGACGGACTGCGGCACGAGCATCAGGACGTCCGCGTGTTGCCTCGACGACCGTTCCTCCCGGCGCGACGACTTCTTCGCGGGTCTCGATCTTCAGAACAGAGCTGCCCTGACCGAGGCCAAAGACGGCAAGGATCTCGCTGACATACAGAGCATAATATCGGTCACCTCCGGCCCGATATTGCAAAGTTTCCCGCGTTCGGACGCGAGTACACCGGAGCATCACAGAACGAAGGCGAACGCGAGTACGGCCGGTTGTTCCTCGGGCTCCTCAAGCACGCCATCATCCGCCGATTATCATCAGGAGGAAGAGGCGCAAGACGCGTTCGCCGCCGAATTCCGCCGTATGAAGCTCAAGGGCGAGTTCCCGTGTCGCTTGTGCGAGGCCGTTTTTCCGAATCTTCGGGCCCTCAAAGGGCACAACCGTTCGCACATGGGGGTTGGCCCGGGTATGCCATATCCTTGCAACATGTGTCCCTACACGAGCAACGACAAGGGCACCCTCGTGCGCCATTTGCGATCGCACAACGGCGACCGGCCCTTCGAGTGCTCCCTGTGCAACTTCGCCTTCACGACAAAAGCCAACTGCGAGAGACACGTGAGAAATCGCCACGGCAAAGTCTCCCGTGACGAGATCAAGAGCGTCATCATATATCATCCGAGCGAAGACAGCACCAACGACTCGGGCTCCCTCGAGCGAACGGATACGCGGCGCGAGGACGCCCGGAAGTCCCTCGTTTATCCACCGAGCGCGGCCATCGGCGACAAAGAAGACAACTCACAGCGTCCCAAAGACTTCTATCTGGGGCTTCAATTCGGCAACAAACAGAGCACAGCCAGCAGCGTCGTTTCCGACGAGCCACCCCACTCGATGCGATCTCTTCGTTACGACAAGACCGACGCTTTTCCAAGTACGCCAACACGCGGCCTCTGCGCTCGTGACACGAGCCACGGAGCTCTGGACGACGAGGCCGAGGACGACGAGGACGACTACGACGATTACGATTACGAGGAGAACGAGAACTATTGCGCGATCGGCAAGTCTGAGAACGGCGGCAAAATCGGCTACAACTCGAGATCCTCGGAGGAGGAGGGTGCTCTAGTCAGCGATACCAAAACGGCGATACACCAAAGAGTTCAAGCTAGTCCGATAGACCTGAAGAAACAGAGCGCCAGGGCCGTGACAGCTTCGACCGGAAGTCCCAACGGCGAGGACGCGATCGTCGAAGCTTCGAGCTTCGCGACTGGCGAAGACGCGCCCCTCGATCTATCCATGGACGTTCTCGATCTCAGCAAAAAGTCAAACGGCAACAACGGCAATCGGGACGTGTCCTCGTCGTCGCCCATCCCCACCGCCGTTACCACAAACGAGACCGAATTCGGTCGCAATCAGAAGGACTTTTACGACGCTACCAATCAATTTCTGCTCACTCAGGCGTTGCTGAAGGCCGGACAAGCCGGTAATCCCGCCACCTCGTTGGAGGCACTCTACGCCAACGCTCACATGATCTACCGGAACTTCGGTGGGTTCTCGGCAGCTGGCGTTGGCACCGGTATACTACCGCCCTATCTCTTCAATCCCCACATGTTCGGACAAGACTTCGCGATCAAGGACCGCCTGCAGAAGGAACTGCTGCGCGGTTTGCAACTTACGAGCGGCGGCAATCTCGTCGAGCCGAGCGTCGGCAATACCGCGTTCACCGGTGCCTATCCACCCGCCAGGGAAGCGACGAGAGCCGAACAGCCCAACGACTACGGCAAACTCGCCAGCTCCAAGCTACCACCGAAAATCGTCACCAGCACATCCTCGATCAGAGAGCCCAAACTCCCCAGTCCCCAATCCTCGAACTCCGTCAAGATGGTCATCAAGAACGGCGTTCTTATGCCCAAACAGAAGCAACGAAGATACAGAACCGAGAGACCCTTCACGTGCGAGCATTGCTCCGCCAGGTTCACCCTTCGCAGCAACATGGAGAGGCACATAAAGCAACAACATCCACAACACTGGAGCCAAAGACCGCGCGGAGGTCACTCCACCAGAGGACGTCCACCGGCGAATCCAGCCAGTCTCGTCCTGCCAACCGGCAACAATCACCACGTCAATCATTCACTCGCACAATCCTGCAACCCGATGTTGCCGAAAATTGCCACTTCCGGGGCTTCCTCGAGCTACGAGAAACACTCGATTTCCGATCAGGTGAAATATGCGATTCTGGCGCAACAGCTGAAAGGCAGCAAGATCGAGGAGAACGACACCGAGGAGGAGCTCGTCATCGACGAGAGCGCCCTGGAGAGCAAAGAGGCGGACGGCGAGGCACTGGCGCGCACCACGACCAGTCTGCTCAGAGGGAAACTCGAGGGAACCAGCACGTCCTACAGAGAGACCAGATCGGACCAGCAAAGAAACAAAGCCCCGGAAGTTTCGAGGCGAGAATCTCCCAGGCCCGAGGAAGCTACGACGCGGACGGAACGGACAACCAAGGAACCCGCGGCGGAAGATCGCCGCAAAGTCGTTGTCAAGACGGAGCCCGAAGAGGCCGAGGATCGGGAGGAAAAAGCGGACGGAGACGGCGAGCGGAACGACGAGGCTCGCGAACCCAGTCAATCGGGTCTTTCGGAAAGGACGAAAGTCGAGCAATCGACCTCGCGCGATTGTCCAACGATCGAGAGAAGCGAAGACCTCGCGAGCGTTTCCGAACTCTTGGACAACGCCTCCCAGCAGTATCAACAATTTCAACCGCAGTACATGAGCGACGAGGAAGGTCTCGTTGCGTCGACCAGCGACTGCAACAATTCCGGCAGCGACGAAAAATCGGATTCCGTGAACTCCGCAAATTCGACAAACTCCCAAACGTCCTCGAAGCGAAAGAAGAAGAAAAAGAAGAAGATGAAGAAGAAGAAATCGGCTTACTCGATGGCGCCTAATCGCGTGATATGCCCTTACTGCGAGAGGCCGTTTCCCTGGACCTCGTCCCTCAGACGGCACATCCTCACGCACACCGGACAGAAGCCCTATCAGTGTATGCACTGCTCGTTGCTCTTCACCACAAAGTCCAATTGCGATCGTCACCTGCTGAGGAAACACAAGAACAACGCCAACAAGATACGCCGCATGAGGAACTCGTCCTCACCGGAGACACTCGAACAGCCCTCCAACAACAACGACACCAGCAGCAACAACAACAACATCAGCAGCAGCAACAACAACAACAACAGCTCGAGCAGCGCGTTCGCGATGAGAAACGTGCCCGAGAGACCGTACAAATGTAACCTCTGCCCGAGCTCGACCTTCTCGACTTTGGGCAACCTCAAGAAGCACAAATCCTCGAAACACTCGAGGAATCCCGGTGGCAAGTCCCGAGCCGAGTCTCCGGTGACGAGCGAGCCCCGCAACAGCCCGATCACCACGTCGAACAAGCAAAACGACAACAGCGGCTACGAGAGTCAATCGTCCGGTGTCTCGGAGAACACGGATCACACCGATGCCCTGGAGAACCTGGAGAACCTGGAGAACGCCCCCTCGAACGTCGACGAGCCGGCTGCCCAGGCTGAGATCGCCGAGAGCCATCGAGCATCCACCGACCCGATCGACAAACGAACGCGGGACTATTTGGAACGCACGGAACCCAACGAGCCACCGGACAACTCGAACGACAACCCGACGACGAAGAATCACGAGACGTGTCCAACGACGACGACGGAGGCCGCCAAGACGCGAAGATTGTCACCGAGGTCGTCACCCGGGCCTACCGACGCTCCTTTCAAGTGTCATCTTTGCGACAGCGGGTTCTCCGAGCGACAGGACTGCCTGGAACACATCAGGATCAACCACACGAGGTCGTACGAGGTTCTCGTCGCCAAGGGCGCTCTCGACATGGATATCGAGACCCCGGAGGAACAACAGACCCCCAACGCATCCACCCTCCACACGAGCGACGGCGAAGAGAAACGCGGCAGATTTCCGGACTACAGCAACAGAAAGGTTGTCTGCGCATTCTGCATGCGTCGTTTTTGGTCGGCGGAGGATCTTCGACGGCACATGAGGACCCACACGGGCGAGCGGCCCTTCTCTTGCGACATATGCTGTCGGCGTTTCACCCTCAAGCACAGCATGCTCCGTCATCGCAAGAAGCACGAGTCCGTTGATTCGATGATGTACGTGGGTACGAGCGGTGACGAGGAATCGGCGCCCTCCCAGCCGCCAACGATAACACCACGCAGCCAGCAACATCAGCACAATCCAGGCCTCGTCGGCAATGCGAGTTGCGACTCGGGCCTCCAGGAAAGAATGTCAATTGGCAGCGCGGTGACCGTGGCGACCGGCGACGCCGCGCCCAGCGGCCTCGGGCGCTTCAATCCTTACGAAAAATTGGCCACCTTCACCGGCAAAATGACAAACGCCCAGCAGAACTTCAACATCGGCGAGGGCACCGCGGACACGGAAAACGATCTCATCTCGAATCTTCTCGGGATCCGGGACAAGAGCATCATCGACAAAGTCTTGCAGGCCTCGGCTGACGACGCTGCCAAACTACTCGGTGTCAACAGACATCACGATTGA
Protein Sequence
MRFCVFGISPTGYVKTTTTATATAAGTAVTEQPEIRPNHRYSSETATDAASSPLTSDQQDTTAYPCPACPIVVTTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHHGASPRDNSAYTDSEGSSDSEKSATKRRHDASIEQEYNNNEIGKSATADHLFSQHESSSPTRFTAKRKRSEITEDAENPARKHKIMLGNSRTELQNGDGRNETRTVVHNCPVCGRLDFATSALLEAHLERHHPEFPAKCDPCNLSFKNHRVLNLHKYMKHIDGENSSVDNNGRNLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGEIARFQCDKCLRAFPCRSALDGHETDCGTSIRTSACCLDDRSSRRDDFFAGLDLQNRAALTEAKDGKDLADIQSIISVTSGPILQSFPRSDASTPEHHRTKANASTAGCSSGSSSTPSSADYHQEEEAQDAFAAEFRRMKLKGEFPCRLCEAVFPNLRALKGHNRSHMGVGPGMPYPCNMCPYTSNDKGTLVRHLRSHNGDRPFECSLCNFAFTTKANCERHVRNRHGKVSRDEIKSVIIYHPSEDSTNDSGSLERTDTRREDARKSLVYPPSAAIGDKEDNSQRPKDFYLGLQFGNKQSTASSVVSDEPPHSMRSLRYDKTDAFPSTPTRGLCARDTSHGALDDEAEDDEDDYDDYDYEENENYCAIGKSENGGKIGYNSRSSEEEGALVSDTKTAIHQRVQASPIDLKKQSARAVTASTGSPNGEDAIVEASSFATGEDAPLDLSMDVLDLSKKSNGNNGNRDVSSSSPIPTAVTTNETEFGRNQKDFYDATNQFLLTQALLKAGQAGNPATSLEALYANAHMIYRNFGGFSAAGVGTGILPPYLFNPHMFGQDFAIKDRLQKELLRGLQLTSGGNLVEPSVGNTAFTGAYPPAREATRAEQPNDYGKLASSKLPPKIVTSTSSIREPKLPSPQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPASLVLPTGNNHHVNHSLAQSCNPMLPKIATSGASSSYEKHSISDQVKYAILAQQLKGSKIEENDTEEELVIDESALESKEADGEALARTTTSLLRGKLEGTSTSYRETRSDQQRNKAPEVSRRESPRPEEATTRTERTTKEPAAEDRRKVVVKTEPEEAEDREEKADGDGERNDEAREPSQSGLSERTKVEQSTSRDCPTIERSEDLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSTNSQTSSKRKKKKKKKMKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPETLEQPSNNNDTSSNNNNISSSNNNNNSSSSAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRNPGGKSRAESPVTSEPRNSPITTSNKQNDNSGYESQSSGVSENTDHTDALENLENLENAPSNVDEPAAQAEIAESHRASTDPIDKRTRDYLERTEPNEPPDNSNDNPTTKNHETCPTTTTEAAKTRRLSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEVLVAKGALDMDIETPEEQQTPNASTLHTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESAPSQPPTITPRSQQHQHNPGLVGNASCDSGLQERMSIGSAVTVATGDAAPSGLGRFNPYEKLATFTGKMTNAQQNFNIGEGTADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01100840;
90% Identity
iTF_01101580;
80% Identity
-