Basic Information

Insect: Ophion ellenae
Gene Symbol: Rreb1_1
Assembly: GCA_963210295.1
Location: OY723395.1:17284450-17295640[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00089 0.12 13.8 0.0 1 23 72 94 72 94 0.98

2 16 0.0002 0.027 15.8 0.3 1 23 108 130 108 130 0.98

3 16 7.3e-07 9.5e-05 23.5 2.8 1 23 136 159 136 160 0.97

4 16 0.028 3.6 9.1 0.4 1 23 267 290 267 291 0.93

5 16 4.5 5.8e+02 2.1 2.8 2 23 297 319 297 319 0.91

6 16 1.3 1.7e+02 3.8 0.3 1 19 377 395 377 398 0.89

7 16 0.008 1 10.8 0.1 1 23 517 539 517 539 0.97

8 16 6.9e-05 0.009 17.3 0.3 1 23 548 570 548 570 0.98

9 16 0.0061 0.79 11.1 3.1 1 23 576 599 576 599 0.97

10 16 0.00055 0.071 14.4 3.0 1 23 1039 1062 1039 1062 0.97

11 16 0.00079 0.1 13.9 0.1 3 23 1377 1397 1375 1397 0.97

12 16 1.1 1.4e+02 4.0 6.5 1 23 1403 1426 1403 1426 0.97

13 16 0.022 2.9 9.4 1.8 1 23 1491 1515 1491 1515 0.95

14 16 0.65 84 4.8 3.1 1 23 1655 1678 1655 1678 0.96

15 16 0.013 1.7 10.1 0.4 2 23 1730 1751 1729 1751 0.94

16 16 1.6 2.1e+02 3.5 8.2 1 23 1757 1779 1757 1779 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00089	0.12	13.8	0.0	1	23	72	94	72	94	0.98
2	16	0.0002	0.027	15.8	0.3	1	23	108	130	108	130	0.98
3	16	7.3e-07	9.5e-05	23.5	2.8	1	23	136	159	136	160	0.97
4	16	0.028	3.6	9.1	0.4	1	23	267	290	267	291	0.93
5	16	4.5	5.8e+02	2.1	2.8	2	23	297	319	297	319	0.91
6	16	1.3	1.7e+02	3.8	0.3	1	19	377	395	377	398	0.89
7	16	0.008	1	10.8	0.1	1	23	517	539	517	539	0.97
8	16	6.9e-05	0.009	17.3	0.3	1	23	548	570	548	570	0.98
9	16	0.0061	0.79	11.1	3.1	1	23	576	599	576	599	0.97
10	16	0.00055	0.071	14.4	3.0	1	23	1039	1062	1039	1062	0.97
11	16	0.00079	0.1	13.9	0.1	3	23	1377	1397	1375	1397	0.97
12	16	1.1	1.4e+02	4.0	6.5	1	23	1403	1426	1403	1426	0.97
13	16	0.022	2.9	9.4	1.8	1	23	1491	1515	1491	1515	0.95
14	16	0.65	84	4.8	3.1	1	23	1655	1678	1655	1678	0.96
15	16	0.013	1.7	10.1	0.4	2	23	1730	1751	1729	1751	0.94
16	16	1.6	2.1e+02	3.5	8.2	1	23	1757	1779	1757	1779	0.98

Sequence Information

Coding Sequence: ATGGCGGCGGCCAAATCAGAACAAAGGGGCTCCAGGCAACCGGAAATAACACAAAGTGACGAGATGAAGACTACGACgacagcaacagcaacagcagccGGGACGGCGGTAACCGAGCAACCCGAGATCCGACCTAACCATCGACACAGCAGCGAAACAGCCACAGATGCAGCATCCTCCCCATTGACATCGGATCACCAGGACGCCACAGCGTATCCCTGTCCAGCCTGTCCAATAGTGGTGACAACGTCGCGCGATCTGACGAATCACCTACGAGGCCACAATTCCCCCCGCAGTACCGATTACAGCGGCGAGGACGATTACTCCTGTGGCGTTTGTCACAAGGTCCTGAGCTCGGCGAGTTCCCTGGACCGTCACGTACTCGTTCACTCGGGCGAGCGTCCCTTCAAGTGCAAATACTGCGACATGGCGTTCACGACGAACGGCAACATGAATCGTCATCTGAGAACGGCCCATCACGGAGGATCGCCTCGCGACAACAGCGCCTACACGGATTCCGATGGTAGCAGCGATTCCGAAAAGTCCGGTACCAAGAGACGTCACGATGCCTCGATCGAGCAAGAGTACAACAACAACGAGATCGGCAAGAGCGCAACTGCCGATCATCTCTTCGGCCATCACGAGTCATCCTCGCCCACGAGATTCATGGCGAAGCGCAAACGTTCCGAGATCACCGAGGACACGGATAATCCCGCGAGAAAGCACAAAATAATGTTGGGCAACTCGCGCACCGAATTGCAAAATGGCGATGGGAGAAACGACTCGCGTACGGTCGTTCACAATTGTCCGGTATGCGGAAGACTGGACTTTGCAACCAGCGCCCTCCTCGAGGCCCATCTCGAGCGTCATCATCCGGAATTCCCGGCAAAGTGCGATCCCTGCAATCTCTCGTTCAAGAACCATCGAGTTCTCAATCTCCACAAATACATGAAGCACATAGACGGGGAGAACAGCTCGGTCGGCAACAACGGCCGTAACTTGCGCAATTCGGTGGTTGGCTTCAACGATTTGACGTTTGTGGATTTCTCGTCGGGCAAGTTTCCGGCGATAGCGCGAGCCGTATGCGAGCAATCGCTCCATCGTCCAGCGTCCGGTGAGATCGCGAGATTCCAGTGTGACAAGTGTCTCCGGGCGTTTCCCTGTCGTTCGGCCCTGGACGCCCACGAGATGGACTGCGGCACGAGCATTCGGACGTCCGCGTGTTGCCTCGACGACCGTTCCTCCCGGCGTGACGACTTCTTCGCGGGTCTCGATCTTCAGAACAGGGCTGCCCTAACCGAGGCCAAAGACGGCAAGGATCTCGCCGACATACAGAGCATAATATCCGTCACTTCCGGCCCGATATTGCAGAGTTTCCCGCGCTCGGACGCGAGTACACCGGAGCATCACAGAATCAAGGCCAACGCGAGTATGGCCGGTTGCTCCTCGGGCTCATCAAGCACGCCATCCTCCTCCGACTATCATCAGGAGGAAGAGGCGCAAGACGCGTTCGCCGCGGAATTCCGTCGTATGAAGCTCAAGGGCGAGTTCCCGTGTCGCTTGTGCGACGCCGTTTTTCCGAATCTTCGGGCCCTCAAAGGGCACAACCGTTCGCACATGGGTGTCGGCCCGGGTATGCCCTATCCCTGCAACATGTGTCCATACACGAGCAACGACAAGGGCACCCTCGTGCGACATTTGCGATCGCACAATGGCGACCGTCCCTTCGAGTGCTCGCTGTGCAACTTCGCCTTCACGACCAAAGCCAACTGCGAGAGACACGTGAGAAATCGCCACGGCAAAGTATCCCGTGACGAGATCAAGAGCGTCATCATATATCATCCGAGCGAAGACAGCACCAACGACTCGGGCTCCCTCGATCGAACGGATACGCGTCGCGAGGACGCCCGCAAGTCACTAGTTTATCCACCGAGCGCGGCCATCAGCGACAAAGAAGACAGCTCCCAGCGTCGCAAAGACTTCTATCTGGGCCTTCAATTCGGCAACAAACAGAGCACACCAAGCAGCGTCGTTTCCGACGAGCCACCACACTCGCTGCGATCTCTTCGTTACGACAAGAGCGACGCTTTTCCAAGTACGCCAACACGCGGCCTTTACGCCCGTGACACGAGCCACGGAGCCTTGGACGACGAGGCcgaggacgacgaggacgactACGATGATTACGATTACGAGGAGAACGAGAACGATTACGCGATCGGCAAGTCCGACAATGTCGGCAAAATCGGCTACAACTCGAGATCTTCGGAGGAGGACGGTGCTCTAGTCAGCGATACCAAAACGGCGATACACCAAAGAGTTCAAGCTAGTCCGATAGACCTGAAGAAGCAGAGCACCAGGGCCGTGACAGCTTCGACCGGAAGTCCCAACGGCGACGACGCGATCGTCGAAGCTTCGACCTTCGCGACCGGCGAAGACGCGCCCCTCGATCTGTCCATGGACGTTCTCGATCTCAGCAAAAAGTCAAACGGCAACAACGCCAATCGGGACGTGTCCTCGTCGTCGCCCGTCGCCACCGCCATTCCCACAAACGAGGCCGAATTCGGTCGCAATCAGAAGGACTTTTACGACGCCACCAATCAATTTCTGCTCACTCAGGCATTGCTGAAGGCCGGACAAGCCGGTAATCCCGCAACCTCGTTGGAGGCACTCTACGCGAACGCTCACATGATCTACAGGAACTTCGGTGGTTTCTCGGCAGCTGGCGTTGGCACTGGTATACTGCCGCCATATCTCTTCAATCCCCACATGTTCGGACAAGACTTCGCGATCAAGGACCGTCTGCAGAAGGAACTGCTGCGCGGTTTGCAGCTTACGAGCGGCGGCAATCTTGTCGAGCCGTCCGTCGGCAATACCGCGTTCACCGGTGCCTATCCACCGGCCAGGGAAGCGACGATCTCGAGAGCCGAACAGCCCAACGACTACGCCAAACTCGCAAGCTCCAAGCCACCACCGAAAATCGTCACCAGCACATCCTCGATCAGAGAGGCCAAAGTCGCCAGTCCCCAATCCTCGAACTCCGTGAAGATGGTCATCAAGAACGGCGTTCTCATGCCCAAGCAGAAGCAACGAAGATACAGAACCGAGAGACCCTTCACGTGCGAGCATTGCTCGGCAAGGTTCACCCTTCGCAGCAACATGGAGAGGCACATCAAGCAACAACATCCGCAACACTGGAGCCAAAGACCGCGCGGAGGTCACTCCACGAGAGGACGTCCACCGGCGAATCCAGCCAGTCTCGTCGTGCCAACCGGCAACAATCATCACGTCAATCATTCACTCTCGCAACCACCCTGCAACCCGATGTTGCCGAAAATTGCCACTTCCGGGGCTTCCTCCAGCTACGAGAAACACTCGATTTCCGATCAGGTGAAATATGCGATTCTGGCGCAACAGCTGAAAGGCAGCAAGATCGAGGAGAACGACACCGAGGAGgagctcatcatcgacgagagcGCCCACGAGAGCAAGGAGGTGGACGGCGAGGCTCTGGCGCGCACCACGACCAGTCTGCTCAGAGGGAAACTCGAGGGAACGAGCACGTCCTACAGAGAGACCAGATCGGACCAGCAAAGAAACAAAGCACCGGAAGTTTCGAGGCGAGAATCTCCCAGACGCGAGGAAGCTACGACGCGGACGGAACGGACAACCAAGGAACCCCCGGCGGAAGATTGCCGCAAAGTCGTCGTGAAGACGGAGCCCGAAGAGGTGGAGGATCAGGAGGAAAAAGCAGTCAAAGATGGCGACCGGAATGACGAGGCTCGTGAACCCAGTCAATCGGGTCTTTCGGAAACGACAAAAGTCGAACAATCGACTTCGCGCGATTGTCCAACGATCGAGAGAAGCGAAGACCTCGCGAGCGTTTCGGAACTCTTGGACAACGCCTCCCAGCAGTATCAACAATTTCAACCGCAGTACATGAGCGACGAGGAGGGTCTCGTCGCATCGACCAGCGACTGCAACAATTCCGGCAGCGACGAAAAATCGGATTCCGTGAATTCCGCAAATTCCACAAACTCCCAAACGTCCTCGAagcgaaagaagaagaaaaagaagaagatgAAGAAGAAGAAATCGGCTTACTCGATGGCGCCCAATCGCGTGATATGCCCTTACTGCGAGAGGCCGTTTCCCTGGACTTCGTCCCTCAGACGGCACATCCTCACGCACACGGGACAGAAGCCCTATCAGTGTATGCACTGCTCGTTGCTCTTCACCACAAAGTCCAATTGCGATCGTCACTTGCTGAGGAAACACAAGAACAACGCCAACAAGATACGCCGCATGAGGAACTCATCCTCACCGGAGACACTCGAACAGCCCTCCAACAACAACGACaccagcagcaacaacaacaacatcaGCAGcagtaacaacaacaacaacaacaacaacaacaacaacagctcAAGCAGCGCATTCGCGATGAGAAACGTGCCCGAGAGACCGTACAAGTGTAATCTCTGCCCGAGCTCGACCTTCTCGACTTTGGGCAACCTCAAGAAGCACAAATCGTCGAAACACTCGAGGAATCCCGGTGTCAAGTCCCGAGCCGAGTCACCGGTTACGAGCGAGCCGCGCAACAGCCCGATCACCACGTCGAACAAGCAAAACGACAACAGCGGCTACGAGAGTCAATCGTCCGGTGTCTCGGAGAACACCGATCACATGGATGCCCTGGAGAACCTGGAGAACGCTCCCGCGAACGTCGACGAGCCGGCTGCCGATGCTGAGATCGTCCAGAGCCATCAGGCATCCACCGAGCCGATCGACAATGGAACGCGGCACAATTTGGAAAgcatggaatgcaacgaaccaCCGGACAACTCCACCGACAACCAGACGCCAAAGAATCACGAGACGTGTCCAACGATGACGACGGAGGCCGCCAAGTCGCGAAGATTGTCACCGAGGTCGTCACCCGGGCCTACCGACGCACCATTCAAGTGTCATCTTTGCGACAGCGGGTTCTCCGAGCGACAGGACTGCCTGGAACACATTAGGATCAACCACACGAGGTCCTACGAGGTTCTCGTGGCCAAGGGCGCTCTCGACATGGATATCGAGACCCCGGAGGAACAACAGACCCCTAACGCATCCGCCCTGCACACGAGCGACGGCGAAGAGAAACGCGGCAGATTTCCCGACTACAGCAACAGAAAGGTTGTCTGCGCATTCTGCATGCGTCGTTTTTGGTCGGCGGAGGATCTTCGACGGCACATGAGGACCCACACGGGCGAGCGGCCGTTCTCTTGCGACATATGCTGTCGGCGTTTCACCCTCAAGCACAGCATGCTCCGTCATCGCAAGAAGCACGAGTCCGTTGATTCGATGATGTACGTGGGTACGAGCGGTGACGAGGAATCGGCGCCGTCCCAGCCGCCAACGATAACACCACGCAGCCAGCAACAACATCAGCACAATCCAGGCCTCGTCGGCAATGCGAGTTGCGACTCGGGGCTCCAGGAAAGAATGTCAATTGGCAGCGCGGTGACCGTGGCGACCGGCGACGCCGCGCCCAGTGGCCTCGGTCGCTTCAATCCTTACGAAAAATTGGCCATCTTCACCGGCAAAATGACAAACGCCCAGCAGAACTTCAACATCGGCGAGGGCACCGCGGACACGGAAAACGATCTGATCTCGAATCTTCTCGGCATCCGGGACAAGAGCATCATCGACAAAGTCCTGCAGGCGTCCGCTGACGACGCCGCCAAACTACTCGGTGTCAACAGACATCACGATTGA
Protein Sequence: MAAAKSEQRGSRQPEITQSDEMKTTTTATATAAGTAVTEQPEIRPNHRHSSETATDAASSPLTSDHQDATAYPCPACPIVVTTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHHGGSPRDNSAYTDSDGSSDSEKSGTKRRHDASIEQEYNNNEIGKSATADHLFGHHESSSPTRFMAKRKRSEITEDTDNPARKHKIMLGNSRTELQNGDGRNDSRTVVHNCPVCGRLDFATSALLEAHLERHHPEFPAKCDPCNLSFKNHRVLNLHKYMKHIDGENSSVGNNGRNLRNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGEIARFQCDKCLRAFPCRSALDAHEMDCGTSIRTSACCLDDRSSRRDDFFAGLDLQNRAALTEAKDGKDLADIQSIISVTSGPILQSFPRSDASTPEHHRIKANASMAGCSSGSSSTPSSSDYHQEEEAQDAFAAEFRRMKLKGEFPCRLCDAVFPNLRALKGHNRSHMGVGPGMPYPCNMCPYTSNDKGTLVRHLRSHNGDRPFECSLCNFAFTTKANCERHVRNRHGKVSRDEIKSVIIYHPSEDSTNDSGSLDRTDTRREDARKSLVYPPSAAISDKEDSSQRRKDFYLGLQFGNKQSTPSSVVSDEPPHSLRSLRYDKSDAFPSTPTRGLYARDTSHGALDDEAEDDEDDYDDYDYEENENDYAIGKSDNVGKIGYNSRSSEEDGALVSDTKTAIHQRVQASPIDLKKQSTRAVTASTGSPNGDDAIVEASTFATGEDAPLDLSMDVLDLSKKSNGNNANRDVSSSSPVATAIPTNEAEFGRNQKDFYDATNQFLLTQALLKAGQAGNPATSLEALYANAHMIYRNFGGFSAAGVGTGILPPYLFNPHMFGQDFAIKDRLQKELLRGLQLTSGGNLVEPSVGNTAFTGAYPPAREATISRAEQPNDYAKLASSKPPPKIVTSTSSIREAKVASPQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPASLVVPTGNNHHVNHSLSQPPCNPMLPKIATSGASSSYEKHSISDQVKYAILAQQLKGSKIEENDTEEELIIDESAHESKEVDGEALARTTTSLLRGKLEGTSTSYRETRSDQQRNKAPEVSRRESPRREEATTRTERTTKEPPAEDCRKVVVKTEPEEVEDQEEKAVKDGDRNDEAREPSQSGLSETTKVEQSTSRDCPTIERSEDLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSTNSQTSSKRKKKKKKKMKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPETLEQPSNNNDTSSNNNNISSSNNNNNNNNNNNSSSSAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRNPGVKSRAESPVTSEPRNSPITTSNKQNDNSGYESQSSGVSENTDHMDALENLENAPANVDEPAADAEIVQSHQASTEPIDNGTRHNLESMECNEPPDNSTDNQTPKNHETCPTMTTEAAKSRRLSPRSSPGPTDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEVLVAKGALDMDIETPEEQQTPNASALHTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESAPSQPPTITPRSQQQHQHNPGLVGNASCDSGLQERMSIGSAVTVATGDAAPSGLGRFNPYEKLAIFTGKMTNAQQNFNIGEGTADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01100840;
90% Identity: iTF_01102290;
80% Identity: -