Basic Information

Insect
Ophion luteus
Gene Symbol
-
Assembly
GCA_944452655.1
Location
CALYBV010000581.1:218699-222802[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00026 0.031 15.3 3.9 1 23 246 268 246 268 0.98
2 11 0.028 3.4 8.9 12.0 1 23 274 296 274 296 0.95
3 11 6e-05 0.0073 17.3 6.6 1 23 302 324 302 324 0.99
4 11 0.00041 0.05 14.6 1.6 1 23 330 352 330 352 0.95
5 11 1.3e-06 0.00016 22.5 1.9 1 23 358 380 358 380 0.97
6 11 2.7e-05 0.0033 18.4 1.1 1 23 386 408 386 408 0.97
7 11 7.9e-05 0.0096 16.9 1.6 1 23 413 435 413 435 0.97
8 11 3.8e-05 0.0046 17.9 0.0 1 23 441 463 441 463 0.96
9 11 4.1e-05 0.005 17.8 0.2 2 23 475 496 474 496 0.96
10 11 5.3e-06 0.00065 20.6 2.5 3 23 564 584 562 584 0.96
11 11 2.6e-05 0.0031 18.4 4.6 1 23 594 616 594 616 0.97

Sequence Information

Coding Sequence
ATGTGCACGACGCCTGGCAATGCGGGCGCCGGTTTCGGCTACGCGTGGTCGTTCAGCGGCCCGGGTACCGAGACCAGGGAGAATTCCCAGGCGGACCTAGCCGCCAACATCAATTACGCGGTCAACAACAATCAGGATCAAGGCTCCGGACAGAAGATTCAGGTGGACATTAAGCCGGCGAAGGTGGCTATAAGCGCGACACCGCGCAGGCCCATGTTCTCCATGAACGAGAGTTGCCAACAGACGCCGACAACGACTACGCATCACGGACACGCCGCGGTAGGTCACAATCAGTCTCACGTCAGAACAAAGAAGCATCACGACGTTTTTTCCCTGACCTGCGACAAGGGAGGCTGCAACTGCGACGCGGCGCATCCAACGCCGCCGCCTTCGCTGTTCTCCAACGCGCTGGTCTTCACAACCGCGGACAAGCACGCTATGAGCAAACACTTCATGACGCCGCTGGGACCTCTTCAACTGACCGCCGAGGAGTGCAACGAGATACTCATGAAGAGAGCGGCGGCTGCCTCCAATCAGCCCAACTCGAACAACGTGGCGACCAGTCAGGCGGACGGCGGTGGAGGTGGCGGCGGCGGTGGTGCCAGCGGCGGCGGCGGCGGTTCGCACTTCGGTCACGTGCTTAGTCACGTCAACGCAACGCAGATCGAGCCGAGCAAGGTAGTGAAGCAACAGCAGGACATGGGTAGCCAGGTGCGAGTTCCCAAGGAGAGGCCCTACTCTTGCTCCGAGTGCGGCAAGTCCTTCCTACTCAAGCATCATCTGACGACTCACGCGCGGGTACACACGGGCGAGCGTCCCCACATATGCGTACACTGCGGCAAAACATTCGCTCACAAACACTGTCTACACACTCATCTCTTGCTACACAGCGCGGAGAGACCCTATCAGTGTCGCGAATGCAAAAAATCGTTTACCCTGAAGCATCATTTGGTGACGCACACGCGCGTTCACACCCGCGAAAGACCGTTCGTTTGTCAGGAGTGCGGACGCGCGTTTCCCCTGAAGCGTCATCTCGTGACGCATAGTAAATTTCACTCGGGCGAGAGACCCTTCGTATGCGAAGAGTGCGGCGAGTCCTTCTCCCAGAAGGATCATCTCACGATGCATTCGCGCTTCCACGGTAGCTTACATCCGTTCGTTTGTCACGATTGCGGTGCTACCTTCCAGAGGAAATTCGAGCTCGTCAATCACGGGCGTCTCCACGGACGCGTGCCCCATTCTTGTACCGTTTGTGGCAAGGAGTTCCTCCAGAAGAGAACGCTTCTCGCTCATATGCGTCTGCACACCGGTGAAACACCCTTCGCCTGTACCGTATGCGGCGAGGCTTTCCCGCGCAAGGTCGACCTCGTCGCCCACTCCAAGATACACAACAACAATACCAACCCGGATGAGAAATGTCTCACGTGCAGGGAATGTGGTTTGGATTTTTCGAATCGGGAGGCACTCACGTTGCACTTGAGGTTACACTCGGGCGATCGTACTCTCGTCACCGACCTTTGCGGACTAGCCGCGGCCTTTCAACAAACGCCAGGACACTTTTTAACGCCAAACGCCACTGGCACTCATCAGATGAACGGGCCAATCGGAACGCCGGGGGTGAGTCACATGCACGGAGCGACGCAGACCTCGCCGCCGGTGTGTTCGGGCCCGAAGCCGAAGCCGCATCTATGCCCGGATTGCGGTCGCGGTTTTGCCCAGAAGCACGGCCTCTCCCAGCACCAGAGAAGACACACGGACGGGAGTTGTCACATAAGATCGCACGTTTGCGACAAGTGCGGCAAGGCCTTCTTTCAGAAGAATCACTTGTTGTTGCACCAGCGCCAGCACATGGATCCACCGCCGAGTATACTGCGACAGCAACAGAGACAGGCGGCTCAGGCGGCCGCCcagcaggcccagcaagcgcaacagcaacaacagcaggtccagcaacagcagcagggctctagccagcaggcccagcagcaggcccaggtgcaacagcaagcgcagcagcaacagcagcaggtacatcagcaggcccaacaacaacagcaagcccaacagcaagcccagcaacaggcgtgcaccgtagacgccaagtcgatacagctccaggcgatacagcaacaggtacaacaacaggtacagcagcaagtacagcagcagcaacagcagcaacaacaacagcagcaacagcaacaacaggcgtgctcggtggacgcaaaagcaatacaattGAACGTCACCATGTGA
Protein Sequence
MCTTPGNAGAGFGYAWSFSGPGTETRENSQADLAANINYAVNNNQDQGSGQKIQVDIKPAKVAISATPRRPMFSMNESCQQTPTTTTHHGHAAVGHNQSHVRTKKHHDVFSLTCDKGGCNCDAAHPTPPPSLFSNALVFTTADKHAMSKHFMTPLGPLQLTAEECNEILMKRAAAASNQPNSNNVATSQADGGGGGGGGGASGGGGGSHFGHVLSHVNATQIEPSKVVKQQQDMGSQVRVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICVHCGKTFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPFVCEECGESFSQKDHLTMHSRFHGSLHPFVCHDCGATFQRKFELVNHGRLHGRVPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKVDLVAHSKIHNNNTNPDEKCLTCRECGLDFSNREALTLHLRLHSGDRTLVTDLCGLAAAFQQTPGHFLTPNATGTHQMNGPIGTPGVSHMHGATQTSPPVCSGPKPKPHLCPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQQAQQAQQQQQQVQQQQQGSSQQAQQQAQVQQQAQQQQQQVHQQAQQQQQAQQQAQQQACTVDAKSIQLQAIQQQVQQQVQQQVQQQQQQQQQQQQQQQQACSVDAKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01509061;
90% Identity
iTF_01056261;
80% Identity
-