Basic Information

Insect: Ophion luteus
Gene Symbol: -
Assembly: GCA_944452655.1
Location: CALYBV010000448.1:85344-87689[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.9e-06 0.00035 21.4 1.0 2 23 401 422 400 422 0.97

2 13 5.7e-06 0.0007 20.5 1.7 1 23 428 450 428 450 0.98

3 13 0.44 54 5.1 2.4 1 20 456 476 456 478 0.93

4 13 2.2e-06 0.00027 21.8 0.8 1 23 500 522 500 522 0.98

5 13 4.7e-07 5.7e-05 23.9 1.0 1 23 528 550 528 550 0.97

6 13 0.00011 0.014 16.4 1.5 1 23 556 578 556 578 0.97

7 13 0.0021 0.25 12.5 0.4 1 23 584 606 584 606 0.99

8 13 4.9e-05 0.006 17.6 1.1 1 23 612 635 612 635 0.92

9 13 1.6e-05 0.002 19.1 1.3 1 23 641 663 641 663 0.98

10 13 0.00033 0.04 15.0 4.7 1 23 669 691 669 691 0.98

11 13 8.7e-06 0.0011 19.9 0.3 1 23 697 720 697 720 0.96

12 13 9.3e-06 0.0011 19.8 0.8 1 23 726 748 726 748 0.96

13 13 3e-06 0.00037 21.4 4.5 1 23 754 776 754 776 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.9e-06	0.00035	21.4	1.0	2	23	401	422	400	422	0.97
2	13	5.7e-06	0.0007	20.5	1.7	1	23	428	450	428	450	0.98
3	13	0.44	54	5.1	2.4	1	20	456	476	456	478	0.93
4	13	2.2e-06	0.00027	21.8	0.8	1	23	500	522	500	522	0.98
5	13	4.7e-07	5.7e-05	23.9	1.0	1	23	528	550	528	550	0.97
6	13	0.00011	0.014	16.4	1.5	1	23	556	578	556	578	0.97
7	13	0.0021	0.25	12.5	0.4	1	23	584	606	584	606	0.99
8	13	4.9e-05	0.006	17.6	1.1	1	23	612	635	612	635	0.92
9	13	1.6e-05	0.002	19.1	1.3	1	23	641	663	641	663	0.98
10	13	0.00033	0.04	15.0	4.7	1	23	669	691	669	691	0.98
11	13	8.7e-06	0.0011	19.9	0.3	1	23	697	720	697	720	0.96
12	13	9.3e-06	0.0011	19.8	0.8	1	23	726	748	726	748	0.96
13	13	3e-06	0.00037	21.4	4.5	1	23	754	776	754	776	0.99

Sequence Information

Coding Sequence: ATGTCCAGCCGATGGATCCCTTCGAGAGTTTTCCTGGACGGGGAGTTGCCCGTGACGCTGGAAGCGCCTTTAGCCTCGATAAAGCGGGACGGAGACTACCGGCAGGCTACGCCGCGCGAACGATTTTCTGCATCGGAGATTCGGAGAACCGGCGAGTGCGCCAACGACCCAGCGCTCGCTCACGAGGCTTCCGCTCCGCTTGCGCCGGTCAGAATAAATCACAGAGCTCAGATAGACGTGATAGAGATGGGAGGAGACGCGAAGGAGGGGAGCGCGGCTCGCGTTCTCGTCTACGAGGAGCAACACACGAAGTTGGTCGTTCTGAGGTCGCTGGAGAGCGACGACGCGCGCGCAGTGGCGAGCGAGCTGGTCGACATCGTGACGACGATCGGTGCGCCGCGAATAATTCAGAGCGGCAACGGTCGCGCGTACGCAGAGCGCGTCGTGCGTGAGATTCGTCGGCTGCTGCGAGACTTTTGCGTCGTTCACGGTGACGCGACGCGAACGGCGAGCGAGGAAAGACGCGACTTCCGACTGATCCTTCGGGCCTGGATGGACGATCATCCCGGCAGACCGTTGAGGGACGCTCTCCGCGTCGTTCAAGTTGCCGAAAACACGAGGCCGAATTCACGCAACGGCTCGATACCCAGCCAATTGTTCTTCGGCAGAAACATCTGCGAGGATCTTTGCCGTACGATCGGCGCGAAGGGACCCAACGGTTGCGTTTTCACGGCCGAGCGAAGTCACAACGAAGTCACAAAGTCGAACGGCCGGCCAACAACGGACAATCACGAGCAGGAGAAAATCGAATGTGACGCACACGGTGAAGAGCCGGACGTGCGATCTCGCACGAAAAGAGACGAGAAAAATGGAGGAATTGAAGAAAACGATTTCGAAGGGAGAAATGGAGAAAAGGATATCGCGGAAGAAAACGACGATAAATATTTTATAGGAAGAAATGAAGAGAAAGATTTGGAAGAAAGAAATGAAGAAGAGGACTTGAGAGAAAAAAGTCCCGAGAAGCGTACAAAAGAAACAAATGACTTGGCATCAAAAGAAAATAAAGTTGGTGGCCCGGAGAGTCCTGAGAACCTGCGCACCCGTCAGCCAATCAGCGTCAAGACTTTGTCTCGCAAAGCCTCGAAAAAGAGTCGCTCACGACCGGAGGCTCGAGGAACAACGAGAAGCAATTCTAACCTCGAGTGTACGTACTGCAAGCAAGTGTTCAACTTCCCAAGTGTACTCAAGAGGCACATGCGTTCGCACACGAACGAGAGGCCTTACGTTTGCGACCTCTGCGACAAGAGTTTCAAGCAGTTGGGACATTTGAGCCAGCACTCGTTAACGCACACGGACTATCGTTCGTTTCGATGCGATCACGGTTGTTCCGTGAAATTCGATAGTCTCGAGTCGCTGAAGCTTCACTCGTGTCGTTCTCGCGGTGAGGCGGACCCGACGTTGCCGCACACGGCCAAACGTCGCGATACTTTGCGCCTCTTCGAGTGCGACATCTGCAAAAAGATCTTCACGACTAAGAGCGTCCTCGAGCGTCACGTTTACACGCACACGCACGAGCGCAAATACGCGTGTAAGATTTGCGGCAAGAGATTCAAGCAGGCCGGCCACGTGAAGTCTCACATGTTGGTACACACGGGGGAGCGAAAATTTTCATGCACCGTTTGCGCGCGACGTTTCAGCCTCTCGAATTCACTGAAGAAACACATGTACGTGCACAACGGTGACAAGCCCTATCAATGCGACGTATGCGGCTCGAGATTCCTCGAGAAGCGCAATCTCAATGGACATCTCATGACGCACACCAACGAACGACCCCATTCGTGCAAAATTTGCGGCAAACGTTACACCCTCGCGGACACCCTGAGACGCCACGTGAGCGCGACGCACGAGGACGGACGCACGTATCAGTGCGAAATTTGCGCGAAAATGTTCAAACAACTGGCACACTTGTCCGTTCACAAGAAGGTTCACAACGACGAGAGACCCTTCCAGTGTCATCTCTGCGAGAAAAACTTCAAGCACAAGAACGTCCTCAAGTCGCATCTTGCCGTACACGCTAATGTGAGACCGTTCGAGTGCGATCTTTGCAAAGCTACCTTCGTTAGAAAGACCAATTTGCAGACTCACATAGCTTCGGCTCATATGAACGAACGGCCCTATGCATGCACCATATGCAACAAACGCTTCAAACAGATCAGCCATCTCAACGGTCACATCGTTGTTCACAGCAATTCGATGCCATATCAGTGCGAATTTTGCGATCGTCGCTGCAACCGACTCGACAATCTCAAGAAACACATGAGACTCCATACAAAGAACAAGAAATAA
Protein Sequence: MSSRWIPSRVFLDGELPVTLEAPLASIKRDGDYRQATPRERFSASEIRRTGECANDPALAHEASAPLAPVRINHRAQIDVIEMGGDAKEGSAARVLVYEEQHTKLVVLRSLESDDARAVASELVDIVTTIGAPRIIQSGNGRAYAERVVREIRRLLRDFCVVHGDATRTASEERRDFRLILRAWMDDHPGRPLRDALRVVQVAENTRPNSRNGSIPSQLFFGRNICEDLCRTIGAKGPNGCVFTAERSHNEVTKSNGRPTTDNHEQEKIECDAHGEEPDVRSRTKRDEKNGGIEENDFEGRNGEKDIAEENDDKYFIGRNEEKDLEERNEEEDLREKSPEKRTKETNDLASKENKVGGPESPENLRTRQPISVKTLSRKASKKSRSRPEARGTTRSNSNLECTYCKQVFNFPSVLKRHMRSHTNERPYVCDLCDKSFKQLGHLSQHSLTHTDYRSFRCDHGCSVKFDSLESLKLHSCRSRGEADPTLPHTAKRRDTLRLFECDICKKIFTTKSVLERHVYTHTHERKYACKICGKRFKQAGHVKSHMLVHTGERKFSCTVCARRFSLSNSLKKHMYVHNGDKPYQCDVCGSRFLEKRNLNGHLMTHTNERPHSCKICGKRYTLADTLRRHVSATHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAVHANVRPFECDLCKATFVRKTNLQTHIASAHMNERPYACTICNKRFKQISHLNGHIVVHSNSMPYQCEFCDRRCNRLDNLKKHMRLHTKNKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01100784;
90% Identity: iTF_01102991; iTF_01101517;
80% Identity: -