Oell021162.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ophion ellenae
Gene Symbol
-
Assembly
GCA_963210295.1
Location
OY723392.1:36988035-36990383[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 3.3e-06 0.00042 21.4 1.0 2 23 402 423 401 423 0.97
2 13 6.5e-06 0.00084 20.5 1.7 1 23 429 451 429 451 0.98
3 13 0.26 34 6.0 1.5 1 20 457 477 457 479 0.93
4 13 2.5e-06 0.00033 21.8 0.8 1 23 501 523 501 523 0.98
5 13 5.3e-07 6.9e-05 23.9 1.0 1 23 529 551 529 551 0.97
6 13 0.00013 0.016 16.4 1.5 1 23 557 579 557 579 0.97
7 13 0.0023 0.3 12.5 0.4 1 23 585 607 585 607 0.99
8 13 5.6e-05 0.0072 17.6 1.1 1 23 613 636 613 636 0.92
9 13 1.8e-05 0.0024 19.1 1.3 1 23 642 664 642 664 0.98
10 13 0.00037 0.049 15.0 4.7 1 23 670 692 670 692 0.98
11 13 9.9e-06 0.0013 19.9 0.3 1 23 698 721 698 721 0.96
12 13 1e-05 0.0014 19.8 0.8 1 23 727 749 727 749 0.96
13 13 3.5e-06 0.00046 21.3 4.5 1 23 755 777 755 777 0.99

Sequence Information

Coding Sequence
ATGTCCAGCCGATGGATCCCTTCGAGAGTTTTCCTGAACGGGGAGTTGCCCGCGACGCTGGAAGCGCCTTTAGCCTCGATAAAGCAAGACGGAGAATACCGGCAGGCTACGCCGCACGAACGACTTTCCGCATCGCAGATTCCGAGAACCGGCGAGTGCGCCAACGACCCAACGCTCGCGCACGAGGCTTCCTCTCCGCTCGCGCCCATCAGAATAAATCACAGAGCTCAGATAGACGTGATAGTGATGGGAGGAGACGCGAAGGAGGGGAGCGTGGCTCGCGTTCTCGTCTACGAGGAGCAACACACGAAGTTGGTCGTTCTGAGGTCGCTGGAGAGCGACGACGCGCGCGCAGTGGCAAGCGAGCTGGTCGACATCGTGACGACGATCGGTGCACCGCGAATAATTCAGAGTGGTAATGGTCGCGCGTACGCGGAGCGCGTCGTGCGTGAGATTCGTCGGCTGCTGCGAGACTTTTGCGTAGTTCACGGTGACGCGACGCGAACGGCGAGCGAGGAAAGACGCGACTTCCGACTGATCCTCCGGGCCTGGATGGACGATCATCCCGGCAGATCGTTGAGGGACGCTCTCCGCGTCGTTCAAGTTGCCGAGAAcacgagaccgaattcgcgcaACGGCTCGATACCCAGCCAATTGTTCTTCGGCAGAAACATCTGCGAGGATCTTTGCCGTACCATCGGCGCGAAGGGACCCAACGGTTGCGTTTTCACGGCCGAGCGAAGTCACAAGCAGCGCGAGCTCTGCTCAAACGGCCGGCAAACAACGGACAATCACGAGCAGGAGACAATCGAGTGTGACGCACACGGTGAAGAGCCGGACGAGCGATCTCGCACGAAAAGGGAtgagaaaaatggagaaattgaagaaaacgatTTCATAGGGAGAAACAGAGAAAAGGATATCGCCGAAGAAAATGACGATAAATATTTTATAGGAAGAAATGAAGAGAAAGATTCGGAAGAAAGAAATGAAGAAGAGGTCTTGAGAGAAAAAAGTCCCGAAAAGCGTACAAAAGAAACAAATGACGAGGcatcaaaagaaaataaagttGGTGGCCCGGAGAGTCCTGAGAACCTGCGCACACGTCAGCCAATCAGCGTTAAGACTTTGTCTCGCAAAGCTTCGAAAAAGAGTCGCTCGCGACCGGAGGCTCGAGGAGCAACGAGAAGCAATTCCAACCTCGAGTGTACGTACTGCAAGCAAGTGTTCAACTTCCCGAGTGTGCTCAAGAGGCACATGCGTTCGCACACGAACGAGAGGCCTTACGTTTGCGACCTCTGCGACAAGAGTTTCAAACAGTTGGGACATTTGAGTCAGCACTCGTTAACGCACACGGACTATCGTTCATTTCGATGCGATTATGGTTGTTCCGTGAAATTCGATAGTCTCGAGTCGCTGAAGCTTCACTCGTGTCGTTCTCGCGGTGAGGCGGACCCGACGTTGACGCACACGGCCAAACGTCGCGATACTTTGCGCCTCTTCGAGTGCGACATCTGCAAAAAGATCTTCACGACTAAGAGCGTCCTCGAGCGTCACGtttacacgcacacgcacgagCGCAAATACGCGTGTAAGATTTGCGGCAAGAGATTCAAGCAGGCCGGCCACGTGAAGTCTCACATGTTGGTACACACGGGTGAGCGCAAATTTTCATGCACCGTTTGCGCGCGACGTTTCAGCCTCTCGAATTCACTGAAGAAACACATGTACGTGCACAACGGTGACAAGCCCTATCAATGCGACGTATGCGGCTCGAGATTCCTCGAGAAGCGCAATCTCAATGGCCATCTCATGACGCACACCAACGAACGACCCCATTCGTGCAAAATTTGCGGCAAACGTTACACCCTCGCGGACACCCTGAGACGTCACGTGAGCGCGACGCACGAGGACGGACGCACGTATCAGTGCGAAATTTGCGCGAAAATGTTCAAACAACTGGCACACTTGTCCGTTCACAAGAAGGTTCACAACGACGAGAGACCCTTCCAGTGTCATCTCTGCGAGAAAAACTTCAAGCACAAGAACGTCCTCAAGTCGCATCTTGCCGTGCACGCTAATGTGAGACCGTTCGAGTGCGATCTTTGCAAAGCTACCTTCGTTAGAAAGACCAATTTGCAGACTCACATCGCTTCGGCTCATATGAACGAACGGCCCTATGCGTGCACCATATGCAACAAACGCTTCAAACAGATCAGCCATCTCAACGGTCACATCGTTGTACACAGCAATTCGATGCCATATCAGTGCGACTTTTGCGATCGTCGCTGCAACCGACTCGACAATCTCAAGAAACACATGAGACTCCATACAAAGAACAAGGAATAA
Protein Sequence
MSSRWIPSRVFLNGELPATLEAPLASIKQDGEYRQATPHERLSASQIPRTGECANDPTLAHEASSPLAPIRINHRAQIDVIVMGGDAKEGSVARVLVYEEQHTKLVVLRSLESDDARAVASELVDIVTTIGAPRIIQSGNGRAYAERVVREIRRLLRDFCVVHGDATRTASEERRDFRLILRAWMDDHPGRSLRDALRVVQVAENTRPNSRNGSIPSQLFFGRNICEDLCRTIGAKGPNGCVFTAERSHKQRELCSNGRQTTDNHEQETIECDAHGEEPDERSRTKRDEKNGEIEENDFIGRNREKDIAEENDDKYFIGRNEEKDSEERNEEEVLREKSPEKRTKETNDEASKENKVGGPESPENLRTRQPISVKTLSRKASKKSRSRPEARGATRSNSNLECTYCKQVFNFPSVLKRHMRSHTNERPYVCDLCDKSFKQLGHLSQHSLTHTDYRSFRCDYGCSVKFDSLESLKLHSCRSRGEADPTLTHTAKRRDTLRLFECDICKKIFTTKSVLERHVYTHTHERKYACKICGKRFKQAGHVKSHMLVHTGERKFSCTVCARRFSLSNSLKKHMYVHNGDKPYQCDVCGSRFLEKRNLNGHLMTHTNERPHSCKICGKRYTLADTLRRHVSATHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAVHANVRPFECDLCKATFVRKTNLQTHIASAHMNERPYACTICNKRFKQISHLNGHIVVHSNSMPYQCDFCDRRCNRLDNLKKHMRLHTKNKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01100784;
90% Identity
iTF_01102241;
80% Identity
-