Olut011092.1
Basic Information
- Insect
- Ophion luteus
- Gene Symbol
- ZNF236
- Assembly
- GCA_944452655.1
- Location
- CALYBV010001073.1:336123-350244[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00016 0.019 16.0 2.5 2 23 53 74 53 74 0.98 2 23 1.8e-08 2.2e-06 28.4 1.9 1 23 93 115 93 115 0.99 3 23 0.00071 0.087 13.9 3.4 1 20 121 140 121 143 0.94 4 23 9.6e-07 0.00012 22.9 0.5 1 23 149 172 149 172 0.97 5 23 0.0013 0.16 13.1 2.8 1 23 181 204 181 204 0.98 6 23 1e-06 0.00013 22.8 2.8 1 23 318 340 318 340 0.98 7 23 0.00027 0.033 15.2 2.3 1 23 346 368 346 368 0.99 8 23 0.0012 0.15 13.2 5.2 1 23 374 396 374 396 0.99 9 23 6e-07 7.4e-05 23.6 2.7 1 23 400 422 400 422 0.98 10 23 0.00091 0.11 13.6 2.9 1 23 477 499 477 499 0.98 11 23 1.9e-05 0.0023 18.9 3.8 1 23 505 527 505 527 0.99 12 23 4e-05 0.0049 17.8 1.2 1 23 533 555 533 555 0.98 13 23 8.9e-05 0.011 16.7 7.2 1 23 561 583 561 583 0.98 14 23 0.049 6 8.1 1.8 2 23 913 934 912 934 0.95 15 23 0.00012 0.015 16.3 1.0 1 23 940 962 940 962 0.99 16 23 0.61 75 4.7 0.0 2 23 970 991 969 991 0.96 17 23 1.2e-07 1.5e-05 25.8 1.3 2 23 1047 1068 1047 1068 0.98 18 23 0.00075 0.091 13.8 4.2 1 23 1074 1096 1074 1096 0.99 19 23 2.9e-05 0.0035 18.3 4.5 1 23 1102 1124 1102 1124 0.98 20 23 0.0012 0.15 13.2 3.1 1 23 1130 1152 1130 1152 0.98 21 23 0.00054 0.065 14.3 1.3 2 23 1376 1397 1375 1397 0.97 22 23 5.1e-06 0.00063 20.6 0.7 1 23 1403 1425 1403 1425 0.98 23 23 5.2e-07 6.4e-05 23.8 3.0 1 23 1431 1454 1431 1454 0.96
Sequence Information
- Coding Sequence
- ATGACTCTAGCCGTCGATTGCGTGAATTTTGCCATTCTACTCATTTGCTCCCGGGTATTTCACTTCGCTCTCGGCCTCAGCTCTCAATATTACAAGGCTCAACTGGACGCCCATTTGAAGCTTCACAACGAGAAATGGTCGAGCGAGGATGTTCGAAAGTGCAAACTGTGCCACAAGCAATTTACTCAACCAGCTCTATATCGTCTCCACATCAGAGAACATTACCGAACGAAGATCGTGAAGAAGACGAAAAAAGGGATGAGTCACAAGACGTTGTACAAGTGCAAGATATGCTCGAAGTCGTTCAAAAAGCCGAGTCAACTGATGAGACACATCAGAGTGCACACCGGTGAAAAGCCGTTCAAGTGCAACATCTGCACTCGCGCGTTCACCCAGAAATGCTCGCTGCAGATTCACACGTGGAAGCACATAGGCATGCGGCCTTATCGTTGCGAGTATTGCAACGCGAAATTCACTCAGAAAGGTAATTTGAACGCTCACATCTTGAGGGTTCACAGCGCTCGAGAGGGCGATCCTATTTATAGTTGTACGCTGTGTACCTGCGTGTTCAAGAAATTGGGTAGTTTGAACGGTCACATGAAGAGAATGCACTCGAATCCTACGGAGGAACCAATGCAAAAATGTGATAGCTCAACGGAAGCGGATATGCAAGCGACTGTCGACAACGTAATGTCGCAGTTGGCCTCGCTCGATGCAAACGTCAAAAATCAAGCGGATTCGACCAATTCGGTGGCGACGATTCGTCAGAGTGACATTCTTCAGCAAGCACTGAAGAAAAGTGGCTTCGACAGTAAGAAAAAGAATGCTGATGATACCGGCAAAAAAGTCGAGCCGCAAACCTCGTTCGTCACGCTATTGGACAGAGCTCAGGATGGCTCGCTGAGGAGATATCTGACGATAAAGCAACGTTGCATCGGGAGTATAAGATGGTACTCGTGCAACTTTTGCCACAAGGAATTCAAAAAACCGTCGGATCTCATAAGACACCTGCGGGTTCATACTCAAGAAAAGCCATTCAAGTGTTCATCCTGTTTCCGGTCGTTCGCTCTAAAGTCAACTTTGCGAGCCCACGAGCGAAGGCACGCCGGCACGAAGCAATACACTTGCGGTACATGCGACAAGACCTTTGCCTGTCACAGCAGTTTAACGTCTCACTTGCGTTCCCACGTGAAGCCACACAAGTGCGATCTCTGCGGAAAAACGTTCAGCACGAGTTCCGTATTGAAGAGTCACATGAATAGTCACACAACGGCCAAATCGAAGATATCACCGGAAGCGGAGAGTCTCGTGACTCAGATTGTTCTCGAGGAGCCACTTCTGATAAGCGATGCTGGTAACAAAATAAGCGTCGCTCACGTTAAGCCGAAACAGAGACAAGTTTATGACAACGGCGATGAGGCTAGACCTCACAAATGTTGGGTATGTCCGGCCGCCTTTAGAAAAATAAGCCATCTCAAGCAACACTATCTCAGGCACACGGGGGAAAGACCCTACAAGTGCCCGAAGTGCGAGAGGAGGTTCACATCAAACAGCGTTCTCAAATCTCATTTGCACACCCACGACGAGTCTCGACCGTACAGTTGTTCCGTTTGTAGCGCAAAGTTTTCGACTCAGAGTAGTATGAAAAGGCATTTGGTGACCCACAGTAACGTCAGGCCTTTCATGTGTCCGTATTGTCACAAGACTTTCAAAACATCTGTCAATTGTCGCAAGCACATGAAGATACACAAAACTGAGCTTGCTGTACAGCAACTGGCACAGCAGAGAACCGAGCGAGAGCCTCAGCTTTCGTCGATACAGCCGAAACAGTCGATAACGGAGTTGCCGGAGAACATAACTCTGCACGAGGACGTAGCCGTGACTTTCCAGTCTCAAATAGCTCCAGATTTTACGCAAGCTTTCAACGATCATTTTCAGCCGATATCGATGACAAAGGAAAAGTCGTATCTCGTCCACGATGGAATAGCTCAGACGATTGAGAACCATAATTTAGCCGTGGTAGATACGGATAACTTAGGAACGTCCCAGACCCTGCATGCCGACGAAACGGGCACTATTACGCTACCTAACTACTCTGGTGATCAAACTCTCACGCCGGAGAGCATACGTGAGATCGAGGAAACTTTGAACCAACAATTGTTCAATATCGGCATGAGCGACCCGAGCAATGTCACCCTGGGCACGAGGGATCAACAGGGAATAAACAATATTTATGACAATGGTAAAACATTGGACTCCGTTAACAATGTCAGCATTACGTCCAATATATTTCCGTCGCACTTTGATACGTTTGATATGAGTCAAATAACACTTCAAACCGACACGGAAATCGACATGGGAATAAGTTCGGCAAATTCGACGAGTATGGCGAGTATATTGCCGCGTTCGGCCCAGGAAGAGCAACGTCTCGTACCGGTAACGACTTGCAGCAATGGTGAAGATTCGCCGAGCAAACTATCACGTCAGTTGATGGTCGCGAGTTCGATGCAAACGTGTTCAGAACTCTTGAAGCCGGTTCAGTCCTGCCCAAAATATCCGAAAGTAATCGCGAAGGCTGACACGACCGATGTTACGGATCTGTTGAACGGTGATGGCACAACGAAAGAGCGGCTATTGGAGGTTCAAGAGAGGATGCATTCCCAGATCGAGCAAATCGCGGAGCACGTCGACACGAATGGGACGACTACGATCGTTCTTCAGTCCGAATCTTCATTGGAATGTCACATGTGTAACAAGAAAGGTTTCACCATGGAGACATTGAAAAGTCATCTGAACGCACATCGCGGGACGAAAGAGTTTCAGTGTAGCCAGTGTCCGTTGAAATTGAGCTCGAACAGCGGATTGAGCCAACATATGAAGAAGCACACCACCAAGTCATTAAGCTGGAGTTGTTCAATATGCATGGAAACATTACCGAACGAAGCGGAGTTGAAGTTGCACGCACAGATGCACGAGGACATCGAGTGGACGGGAGTTTCGATAGAGCCGGACAGTTCGCAGAAAGAGCCAATGTCCGTGGACCCCAATAGTTTCTTAACTGCAACAGCAGCGACAACCACAACATCGCGAACTCAAGAAAACAACGAATCTCCGAAAGAAAAGAAGGAGTACTCGAACAGATGTAAATATTGCCCGAAGACGTTTCGCAAGCCGAGCGATCTGATAAGACACGTGAGAACGCACACGGGTGAACGCCCGTACAAGTGTAAATTTTGCGACAAGAGTTTCGCGGTCAAGTGCACACTGGATTCGCACACCAAGGTTCATACCGGAAAAAAGAAGTTTTGCTGTCACGTGTGCAACCGTCTTTTCGCGACGAAGGGTAGTCTGAAGGTTCACATGCGAATGCACACGGGCTCGAATCCATTCAGATGTTCAATGTGCGATCTCCGTTTTCGCACGTCGGGACATCGAAAGGTTCACGAGTTGACGCACACCCGGGACCCGAAGGCGGGCACCAAGCGCAAGCCCAAACAATTGAAGGTGAGCGCTATTGCCGAGGTGGTAGCGGAGGTCGAGAAGACCGTCGAAAGGTCAGTGAAGATGGCAAACTCGATCGGCGAACAAACGAACGAGACGAATTATCCGAATCTCGATACGATAACGATAGGAGCAAGCGAACTCACGAATCACATAACATTCAATCCCGACGGGACGATCGTGAATAACGACTCGATGCTCTCGATAAACGAGAGCAATCAACTGGTAGCAAATTTACATTTTCTTCTGGCAAACGGTCTCGTTACGATTCAAGCCGACGACGTACTGCTGCCCCAAACAAATCTCAGCACGGACGTTAACGTCACTCACCACGAAACTAGTCTTGCTAATATAGTCTCACCCACGAATGTTCTTTCCTCCGGCGAGCAAAGACGACAGGTTGCCTGCAACGATAACGCTGCGGAGAATATCGTCGTGGCGACTCACCTGCCTTGTTTCGCCACCGATCTTCTTGATCAGCAACCTAGGATGATAAATTTAAACGAGTGCGAGACCATCGCGCCCCTTGAGCCGCTGAATACTGCGCCGGAAAAAAAACTACAGTCGCAACGTCAACAAACTCCGAAACAAGCGTCGCCCGCGAAATCCGCCAATTCCAAGAAAGAGTGCGACATATGCGGCAAAATATTTATGAAGCCCTGCCAGGTGGAGCGACACAAACGCATTCACACGGGCGAACGACCCTTCAAGTGCGAACTGTGCGAAAAATCTTTCGCTCAAAAAGCCACTCTGCAGATGCATCAGAAGGCGCACACCGGTGACCGACCGCATCCCTGCCCGCACTGCGATTATTCGTTCACGCAAAAGGGCAATCTCCAGACGCACCTGAAACGAGCGCATCAGCTCGATACTCTGGAAGTCAAGAAAATTCGCAGAGGACCGCAACAATTGCTGAGTGCCAAATTGACGCAAAACAATCCCGACGAGAATAGAATATTGAGTTTCGACGATATCTCGATCGTCGAGTATTTGAAGTGA
- Protein Sequence
- MTLAVDCVNFAILLICSRVFHFALGLSSQYYKAQLDAHLKLHNEKWSSEDVRKCKLCHKQFTQPALYRLHIREHYRTKIVKKTKKGMSHKTLYKCKICSKSFKKPSQLMRHIRVHTGEKPFKCNICTRAFTQKCSLQIHTWKHIGMRPYRCEYCNAKFTQKGNLNAHILRVHSAREGDPIYSCTLCTCVFKKLGSLNGHMKRMHSNPTEEPMQKCDSSTEADMQATVDNVMSQLASLDANVKNQADSTNSVATIRQSDILQQALKKSGFDSKKKNADDTGKKVEPQTSFVTLLDRAQDGSLRRYLTIKQRCIGSIRWYSCNFCHKEFKKPSDLIRHLRVHTQEKPFKCSSCFRSFALKSTLRAHERRHAGTKQYTCGTCDKTFACHSSLTSHLRSHVKPHKCDLCGKTFSTSSVLKSHMNSHTTAKSKISPEAESLVTQIVLEEPLLISDAGNKISVAHVKPKQRQVYDNGDEARPHKCWVCPAAFRKISHLKQHYLRHTGERPYKCPKCERRFTSNSVLKSHLHTHDESRPYSCSVCSAKFSTQSSMKRHLVTHSNVRPFMCPYCHKTFKTSVNCRKHMKIHKTELAVQQLAQQRTEREPQLSSIQPKQSITELPENITLHEDVAVTFQSQIAPDFTQAFNDHFQPISMTKEKSYLVHDGIAQTIENHNLAVVDTDNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMSDPSNVTLGTRDQQGINNIYDNGKTLDSVNNVSITSNIFPSHFDTFDMSQITLQTDTEIDMGISSANSTSMASILPRSAQEEQRLVPVTTCSNGEDSPSKLSRQLMVASSMQTCSELLKPVQSCPKYPKVIAKADTTDVTDLLNGDGTTKERLLEVQERMHSQIEQIAEHVDTNGTTTIVLQSESSLECHMCNKKGFTMETLKSHLNAHRGTKEFQCSQCPLKLSSNSGLSQHMKKHTTKSLSWSCSICMETLPNEAELKLHAQMHEDIEWTGVSIEPDSSQKEPMSVDPNSFLTATAATTTTSRTQENNESPKEKKEYSNRCKYCPKTFRKPSDLIRHVRTHTGERPYKCKFCDKSFAVKCTLDSHTKVHTGKKKFCCHVCNRLFATKGSLKVHMRMHTGSNPFRCSMCDLRFRTSGHRKVHELTHTRDPKAGTKRKPKQLKVSAIAEVVAEVEKTVERSVKMANSIGEQTNETNYPNLDTITIGASELTNHITFNPDGTIVNNDSMLSINESNQLVANLHFLLANGLVTIQADDVLLPQTNLSTDVNVTHHETSLANIVSPTNVLSSGEQRRQVACNDNAAENIVVATHLPCFATDLLDQQPRMINLNECETIAPLEPLNTAPEKKLQSQRQQTPKQASPAKSANSKKECDICGKIFMKPCQVERHKRIHTGERPFKCELCEKSFAQKATLQMHQKAHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLEVKKIRRGPQQLLSAKLTQNNPDENRILSFDDISIVEYLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439660;
- 90% Identity
- iTF_01100775;
- 80% Identity
- -