Olut011854.1
Basic Information
- Insect
- Ophion luteus
- Gene Symbol
- lola_2
- Assembly
- GCA_944452655.1
- Location
- CALYBV010001158.1:402724-409126[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4 1.2e+04 -3.3 0.1 4 20 102 118 101 119 0.73 2 2 2.2e-08 3.5e-05 24.0 0.1 9 40 421 453 420 458 0.88
Sequence Information
- Coding Sequence
- atggaggacgaccagcagttctgcctaaggtggaacaatcatcagagtacgctcatccaaaacttcgacacactcctagagagcggcacgttggtcgactgcaccctggcagcggaggggaagtacctaaaggcccacaaagtagtcctctccgcgtgcagtccgtactttgagggccttctcagcgaacactatgacaagcaccctgtctttatattaaaggacgttaagtttaaagaactgaaagccatgatggactacatgtacaggggagaagtgaatatctcccaggaccaattggcagccctccttaaagcggccgagtcgctgcaaataaagggcctcTCGGAGAGCAAAACGGGGGGCAACAATAACGGCAGCAAAACTGACTCATCCTCGTCGTCGTCGAGGCAACAACAGAAAGTGGTTGCGGCGCAGCCTACGGCACCGTCGTTGGACATTCCACACGCGTCTTCCGGTCTCACAATAGAAAAGAACAATAAAGTTCCTAGGCAGAGTATGGCACAGAGCTCGGTCGGCGATCTACCAGAAGACTCGGCAAGTCCTCAACTACCCAAGGGGCTCTCCTCCAGGGAAGGCTCGCAAAGTCCGACATCGAGAAAGAGAAAGAGATTCAGAAGAAGAAGCGTCGGGGACGACAACTCGATCGAGAATCACGACGCCTCGAACTCGAGCGATATGCCGCAACAAATGAGCGTACCCTCACTCGGTATCGCACCAGTTGCAGACGAAAAGACTCACACCGATCAGGCCGATCCCCTCGGCAGATCCGCGCTTATGCAACAGCTGACCAAACCCGCCGAGGACATGTTACAATTACCACTCGAAAAACCTGAGCCTACCGAAAGCCTGATCGAGCCAAAGTCCGAGTACCTGGAGGATAACGAGGAGAGCGTCGAAGATCTGACGCTAGACGACGATATGAACGACCTCAATGAAATGGAACAAGACAACAACAGAGCCGGCCCGTCTCACGATCCCTCCCAACACCCCGGTGGGGGGTCGATCTCGCGGTATCGCGGCACGAGTTCCGGCGTAACGATTGCCGCCGTCGCCGGCACGGTTGCCCGCGTCGGCGACGACGACGAAGCGCGATGGGCGTCCCATTTCCTCGATTATCGTAATAAAAAGTACACGAACACGAGACGTCCACGTCCGGACGTCGACGTAGGCGCGTTGCTCAAATCTCTCGCCAACAAGCAGGGACGAAAGTATAGCTTAGACTCGGTTAAAATGTCGCTGGAGGCCATATTGCTCCAGGGCGTTAGCACCACCCACGCATCCGAGATGTACGGTATCAACCGTTCGACCCTACAGTTTTATCTGAAAAAATTGAACGTCGTCAGACGAAGATGGAGACAGCCCGCGAAACTCGTACATCAAGGACAGTCCTGA
- Protein Sequence
- MEDDQQFCLRWNNHQSTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTGGNNNGSKTDSSSSSSRQQQKVVAAQPTAPSLDIPHASSGLTIEKNNKVPRQSMAQSSVGDLPEDSASPQLPKGLSSREGSQSPTSRKRKRFRRRSVGDDNSIENHDASNSSDMPQQMSVPSLGIAPVADEKTHTDQADPLGRSALMQQLTKPAEDMLQLPLEKPEPTESLIEPKSEYLEDNEESVEDLTLDDDMNDLNEMEQDNNRAGPSHDPSQHPGGGSISRYRGTSSGVTIAAVAGTVARVGDDDEARWASHFLDYRNKKYTNTRRPRPDVDVGALLKSLANKQGRKYSLDSVKMSLEAILLQGVSTTHASEMYGINRSTLQFYLKKLNVVRRRWRQPAKLVHQGQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266562;
- 90% Identity
- iTF_01100510;
- 80% Identity
- iTF_01102178;