Basic Information

Insect: Ophion ellenae
Gene Symbol: ush
Assembly: GCA_963210295.1
Location: OY723392.1:22913357-22936322[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0051 0.67 11.4 0.0 2 20 285 303 284 305 0.91

2 8 7.8e-05 0.01 17.1 0.4 1 23 336 358 336 358 0.98

3 8 0.23 29 6.2 1.1 3 20 410 427 409 429 0.93

4 8 0.0092 1.2 10.6 4.3 2 21 639 658 638 659 0.94

5 8 0.076 9.9 7.7 0.0 3 20 686 703 684 705 0.91

6 8 0.17 22 6.6 0.0 2 23 744 765 743 765 0.94

7 8 0.009 1.2 10.6 1.7 1 23 771 793 771 793 0.99

8 8 0.11 14 7.2 0.5 3 21 897 915 896 916 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0051	0.67	11.4	0.0	2	20	285	303	284	305	0.91
2	8	7.8e-05	0.01	17.1	0.4	1	23	336	358	336	358	0.98
3	8	0.23	29	6.2	1.1	3	20	410	427	409	429	0.93
4	8	0.0092	1.2	10.6	4.3	2	21	639	658	638	659	0.94
5	8	0.076	9.9	7.7	0.0	3	20	686	703	684	705	0.91
6	8	0.17	22	6.6	0.0	2	23	744	765	743	765	0.94
7	8	0.009	1.2	10.6	1.7	1	23	771	793	771	793	0.99
8	8	0.11	14	7.2	0.5	3	21	897	915	896	916	0.92

Sequence Information

Coding Sequence: atggtGGTTTCCCGCGAGTCGTCCGACCACGTGGTCGTATGTCAGGGCGTAAGGATCAAATGGGAAGATGAGGAATGGAGCGACTCGGAGAAGACACCATCGGTGAGCAGCGGTTTGGAGGGTGGTGGCTCGGCCGTATCGAGTCCGGCGGCGCCAAACGTCGACGAGGACTCGAGCCAGCCGCCGCCCTCGCGACTCGGGCCGAACAATTCCACCACCAGCGGTGGCCATATCTCTAACGCGTTGGTGGCCTCGTCGACGGCGACGATACCGAATTCGTCCGGCGGCGAGGACATCAGATTGCGTCTGAGCGTGCTCAGCGAGGACGCCAGGAAGCGACTGGCCACTCTGGCCGAGGGCTTCGAGATTGCGAAAGTCATTCGGGAGCGCCACGCGACGGAAAAGGCGACGGGGCGGGGCAACAGAACGCGAGATTCGAGCCCAAAATCCACGAGGAACGAAGCGGACGATGACATCGTCGTGTGCAGCCCTCGAGGATTCAAGGACAACGAGGATAATCAAAGAACGCTGACGAGGCGACGAGACGTCCACAGACGAGAATCCGAGGATTCGAGACGAGGGGAGGAAGTGCCATCGGAGCCGAAAAAAATACGCCTCGACGATGACGCCGCGCCGAGACTTCGACTCAACGCTAGTCTTGCGACGGATCCGGCTCTCAGACCGGCTACCGTCGCAGCTCTCACTATCAAACCCGAAAACGTCTCGCCACCCAACTCGACATCGGCTCTGCCCCCGGGTCTTCAGAATGCGTTAGCATCGGGTCGTTTATTCGTTTTACCGACGGACGGTAAGGAGTCATTGACGCTGGAGCCATCGAGGCCGATCCCGTTGATGTGTCCACCTTGCGGCATACGTTTCAGCTCGGCGAGCACCCTCGAGGCGCACCGAACGTATTACTGCGCGCACAGGCCTCGCTTGGATGAGGACGGTGGCAAcaacgacgaggacgacgagaaGACCGGCAAATACGAGTCGCGCAAGGCATACGCGTGTCCCCAGTGTTCTTACAGTGCCGACAAGAAAGTATCGCTCAATCGTCACATGAGAATGCACGCGACATCGCCGATAGCCGCGGCCCCGATCGCCGCCCCCACGACGATCACGACGACGTCCCAGTCGCCGCAGGGCAGCACAACCGCGAGCGCGAACTCGACGAAATCCTCGAGTTCGTCGAACGGCTCGTTGAACGAGGAGGCCGAGAGATACTGTCGAAATTGCGACATAAGATTCGTCTCCCTAAAGACATATCGCGCTCACAAGACCCACTATTGCAACACCAGGCACGTCGTCAAGGACACAACGGTCATGACGACGACGAAAAATTCACCCCCCACGACTGGAAGCCCCGGTGATTCGCCGCCACCGCACACCTGCCTCGCACTGCCGACGAATCCCATTCTCATAGTTCCGTACTCGCTGTTTCGCGGCGCTAGTATGCTCGCCGCACCTACCTTACCGACGCCCGATACACCGTGCTTCCTTCTGCCGAACGGATCGCTGCAGCCGATGACCCGAGGTCCACCGACCAACAGCCAAAATACCGTGCAGGATCCACCGTCCGTACTGAGGATAGCCAATAAACCGGTGACGCCGATCGTAATGTCGATTCCCGTACTGTCGACCTCACCGTCCTCCGGTGCATCGGCACCCCTCGATCTCAGCGTACGGAGGTCACCGGTCCAACAAGACGAGAAGGAAAATCGCGTCTCGCCTGCGCCATCTTCGTTGCCACCACCGCCAGGCAGTCCAAGGTCACGGGGCAGCGCCAGCCCGAGAACTAGGTCTCTGCCGAATGCACAGAACCAACAGCCACCAACCACCGAACTCGCCCTCAGACTCGCCGAACTTCCACCACCACCCGTACCCGGGGTACTCGTCAAGCAAGGCGTCTCTCGATGCAAAGAGTGCAATATCGTGTTTTGCCGTCACGAGAACTTCATCGCTCACAAGAAACATTACTGCCAAGCGAGGGAAAGTACCGTCTGCAATTCACCACCGCCCGGTACACCGTCGCCACCGCTCGTCCAATTGATATGCGCGGCTTGCGGCATAAAGTTCGCCTCCATGGACAATCTCGCGACCCATCAGGCGTTTTACTGTAAGAAGAGGCCCGAGCCCCAGGAACATCACGCGCAATGTCCCAAATGCAAGACGATGATCGATCCCGGTAGAACGCACACGTGCTCGAGCGGTCCCACAGGTGGATGGAGATGTCTGGTGTGCGGTGCCGTCAGTCCAACCGCAGGCGCGGCTCAACGTCACATGGACGCCCATCAGGGTGTCAAAGCGTTTCGTTGTAAGATCTGTCGTTACAAGGGAAACACACTGCGCGGCATGAGAACCCACATAAGAATGCACTTCGAGAAACGTGGAACAGACCTTCAGGAGGAAAAATACATCGAGTACGTGGTGGACGACGAGGCGGGTAATGCAACGAGCGAGCCCGCGACGGCAACGACACCGAAGGAAGTAGCGACGGAGGTTCAGTTGAACGGCAAAGCCGAGGTGAGAAAGAGCCCACCGTTGCCACCTCCGCCGCCACCACTTCCGCCGCCCCCGCCACCACCAGCTTCGGCGCCACAAACGCTCGGCAAAGTGAAGCAAGAACGCGAGGACACACCACCACCCGAGGAGAGCCTGGATCCCAGCAAGACCGGCCCTCGTTACTGTCGCTCTTGCGACATCAGCTTCAATTATCTGAGCACCTTCATAGCCCACAAGAAATTTTACTGCTCCAGTCACGCCGGCGAGgcgagcaacaacaacaacaataacaacaacaacaacaacgcgacgacgacgacgacgacgacgacgacgacgacgacgacgacgcccACGACAACTACAGCGAGAACGGCGACTCCTCCGACCGGCAGAACTGAAGCTTCCGtaatttaa
Protein Sequence: MVVSRESSDHVVVCQGVRIKWEDEEWSDSEKTPSVSSGLEGGGSAVSSPAAPNVDEDSSQPPPSRLGPNNSTTSGGHISNALVASSTATIPNSSGGEDIRLRLSVLSEDARKRLATLAEGFEIAKVIRERHATEKATGRGNRTRDSSPKSTRNEADDDIVVCSPRGFKDNEDNQRTLTRRRDVHRRESEDSRRGEEVPSEPKKIRLDDDAAPRLRLNASLATDPALRPATVAALTIKPENVSPPNSTSALPPGLQNALASGRLFVLPTDGKESLTLEPSRPIPLMCPPCGIRFSSASTLEAHRTYYCAHRPRLDEDGGNNDEDDEKTGKYESRKAYACPQCSYSADKKVSLNRHMRMHATSPIAAAPIAAPTTITTTSQSPQGSTTASANSTKSSSSSNGSLNEEAERYCRNCDIRFVSLKTYRAHKTHYCNTRHVVKDTTVMTTTKNSPPTTGSPGDSPPPHTCLALPTNPILIVPYSLFRGASMLAAPTLPTPDTPCFLLPNGSLQPMTRGPPTNSQNTVQDPPSVLRIANKPVTPIVMSIPVLSTSPSSGASAPLDLSVRRSPVQQDEKENRVSPAPSSLPPPPGSPRSRGSASPRTRSLPNAQNQQPPTTELALRLAELPPPPVPGVLVKQGVSRCKECNIVFCRHENFIAHKKHYCQARESTVCNSPPPGTPSPPLVQLICAACGIKFASMDNLATHQAFYCKKRPEPQEHHAQCPKCKTMIDPGRTHTCSSGPTGGWRCLVCGAVSPTAGAAQRHMDAHQGVKAFRCKICRYKGNTLRGMRTHIRMHFEKRGTDLQEEKYIEYVVDDEAGNATSEPATATTPKEVATEVQLNGKAEVRKSPPLPPPPPPLPPPPPPPASAPQTLGKVKQEREDTPPPEESLDPSKTGPRYCRSCDISFNYLSTFIAHKKFYCSSHAGEASNNNNNNNNNNNATTTTTTTTTTTTTTPTTTTARTATPPTGRTEASVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00266027;
90% Identity: iTF_01103845;
80% Identity: -