Basic Information

Insect: Ophion ellenae
Gene Symbol: gtf3a
Assembly: GCA_963210295.1
Location: OY723390.1:31217958-31228747[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 5.7e-05 0.0074 17.5 0.1 2 23 845 866 844 866 0.97

2 17 4.5 5.9e+02 2.1 0.4 3 19 874 890 872 892 0.90

3 17 2.5 3.3e+02 2.9 1.0 2 23 899 920 898 920 0.96

4 17 0.0011 0.15 13.4 1.8 3 23 929 950 928 950 0.98

5 17 0.0016 0.21 12.9 3.0 1 23 957 980 957 980 0.98

6 17 0.00068 0.089 14.1 2.1 3 23 988 1009 987 1010 0.96

7 17 2.9 3.7e+02 2.7 0.4 3 23 1018 1037 1017 1037 0.88

8 17 1.6e-07 2.1e-05 25.5 2.1 2 23 1043 1064 1042 1064 0.97

9 17 2.6e-06 0.00034 21.7 0.2 1 23 1070 1092 1070 1092 0.99

10 17 0.005 0.65 11.4 2.8 2 23 1104 1126 1103 1126 0.95

11 17 0.53 69 5.0 2.6 1 23 1132 1155 1132 1155 0.92

12 17 0.0066 0.86 11.0 2.0 2 23 1177 1199 1176 1199 0.95

13 17 0.0023 0.3 12.5 1.2 2 23 1206 1228 1205 1228 0.96

14 17 4.7e-05 0.0061 17.8 1.7 2 23 1236 1257 1235 1257 0.97

15 17 0.0014 0.18 13.1 2.3 1 23 1263 1286 1263 1286 0.96

16 17 0.38 49 5.5 3.2 2 23 1293 1314 1292 1314 0.96

17 17 0.04 5.2 8.6 2.4 1 23 1320 1342 1320 1342 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	5.7e-05	0.0074	17.5	0.1	2	23	845	866	844	866	0.97
2	17	4.5	5.9e+02	2.1	0.4	3	19	874	890	872	892	0.90
3	17	2.5	3.3e+02	2.9	1.0	2	23	899	920	898	920	0.96
4	17	0.0011	0.15	13.4	1.8	3	23	929	950	928	950	0.98
5	17	0.0016	0.21	12.9	3.0	1	23	957	980	957	980	0.98
6	17	0.00068	0.089	14.1	2.1	3	23	988	1009	987	1010	0.96
7	17	2.9	3.7e+02	2.7	0.4	3	23	1018	1037	1017	1037	0.88
8	17	1.6e-07	2.1e-05	25.5	2.1	2	23	1043	1064	1042	1064	0.97
9	17	2.6e-06	0.00034	21.7	0.2	1	23	1070	1092	1070	1092	0.99
10	17	0.005	0.65	11.4	2.8	2	23	1104	1126	1103	1126	0.95
11	17	0.53	69	5.0	2.6	1	23	1132	1155	1132	1155	0.92
12	17	0.0066	0.86	11.0	2.0	2	23	1177	1199	1176	1199	0.95
13	17	0.0023	0.3	12.5	1.2	2	23	1206	1228	1205	1228	0.96
14	17	4.7e-05	0.0061	17.8	1.7	2	23	1236	1257	1235	1257	0.97
15	17	0.0014	0.18	13.1	2.3	1	23	1263	1286	1263	1286	0.96
16	17	0.38	49	5.5	3.2	2	23	1293	1314	1292	1314	0.96
17	17	0.04	5.2	8.6	2.4	1	23	1320	1342	1320	1342	0.98

Sequence Information

Coding Sequence: ATGAGCGTAACGAACAAGAGTATTGCGTACGTAGACGCGGAGGCGAATGATCCGACAAACGTTGATGACAATTCGAACGGGCATTCGTCGGCGCACGAGGCTCTCATAAGGGATCTCACCTCGGAGAATGTTGTCATACTCAACGATGTTCTCTGCCCGGAGGAGCGTACTCTGGACGCCGCTCTACGTCCGACGGCCAATGTTGTCACCGTAGGTGGGTCGCCGTCGCAGGAGTGCGGCGCCGCCGAACACGCGCCAGATTCGTTTTCGAAAGAGGCGAAGCAATGTTGGAGCTCCGTGGCAAAGTTGGACCGGAACGATCACGACTACAGTGGCGTTCAGCGGGTCGTCGAGGTGGAAAAATCGACGAAGATGATCGACCAAAATCATTGTACGATCGTGAAGAACAGCACGGCATCGTTGTTGAGAACGATAAAGCGCAAGATGGCCACGGCGTCGCATCAGAGATCGAGCGCTCGAGTGAAGAATATAAGCGAGTTGAAGAAGGTGACGCCGCGATTGAAGCTCGTTGCATCGTCGGAGTCAAGAACGCCGCCCCCTCCGTTGCATCCCACCAAGCTCAATATCCCGAGTGCCGCGATTACGAAGAATTCGAGTGTACAGCATTCGCGGGAACAGTTGAAAAACTATTGTCGCACATGCGCCGGTCTGAAATTACCGCTGGTCGATATATTCAGCGGGAAAGGAATGCAGATGCGACTGAATCAGCAGATGAAACATTTGGTCGAGATAAAGGCGGACGACAGTCTCTCGACTCAGATGTGCATGGATTGCATATGCGATCTAAAGATGAGTTACAAATTTTTCATGCAAATCAAAAAGGCCCAAGTGAAGTTGCAATCGATAAGCGCCTCGTTGCACAGTAACGACGCAGCGACGGATGTTGCCGGAAGCACCGAGGACGAGCAAACGCCACCCATCGCCACGATAAACTTGACCAGCAGTCCGGAGCGTACGACTTATACGTCGGAAAAGAGAGAAATCGACGGCTCCGAATATCCGACAAATGTCTCAACCCCGGCCAAAGTTACGGACGAACAAGCCGTAACGAACGATACGAATAATTGCGAGTCTCCGACGAAGGTTGAGTCGCGTGCGGCTAAACCTTGCGTTTTCAATCTCAGCGACGACAACGACTCCATCGAAGAATTCGATCCGGAGGATCCAGCCTTCCAGTCGGACGTCGCCGAACGCGAGGTCGATTGTTCCCCGGAAACCCCAAAGAGTCCCCGGACTCCCAAAAGTCCCCGCGAAACGAACAATATTCAAAGAGAAACATCGAGCCCAGTGGCGACGAAAGTACCACCGGTGTCCGTTGTCGAGTCCGGAGCGGAGCGGAAACCAGACCCAACGAAGGATCCGAACAAAACGGTCTATCAGTACGACACGAAGTTGCAGGCTTACATAAAAGTCGAGCCGCCGGACGACGATCGCGGCAGCGCGAACGTCGACAATAATATCGAAAACGGCACAGGCACCAAGGACAACGTCAAGCAACCCAACATCCTCAAGCGCAAAATCTCCGTTGGCAAGAATTTTTTAGGAAATCCCGTGGCGTGCGCCAAACAGTCGGATTCGACGCACGTCAGATCGGGACAGAGAGACATGAAAAAGCCCAAATTGGACGTAAAGAACGCGCTAAACGTTTCGAACGAGAACGAGGAAGGTATAATGTACGTGACGGTGAAAGGATCCAAGCCCAACGAGCTGTTGCTCGtaaaggtgaaaaaaatggaaaaaggacCGGACGGTAAGAAGGACGATAGGAAGAAGCAGCCGAACAGCGAGGTCCCTCCGTCCGTCGAGAAAATACTGAAGAAGCTCGAACCCGCGATCATAAAGAGGGAAGCGGAATTGCAATTGGAACGTTCGAAGATACTGGACATGAGGGAACGCAAGATAGCCGAGCAAATCGAGGAGTACAAGAGGCGGCGAGAGAAGATACTCGGCGGTAGCGCCGGTGTGCCGAACGCTTTGAAATTCGACGAGGGTACGATACGTTTCGTGAATCCGATCGACGCCACGGTCAATCCCGTGGACGACGGTGTGCGAATTAAGATCGAGCCGATCGACGATACCGAGGACGCGCGCCGCGTGGCAGACCCGTTAAACGAGCAATCGTGCAACGAGACCGAGGAAACGATCGAGGTGAAGGAAGACGAGGACACCGAGGCGTACGACAACGCGGGCGAGTATCTCGCGCGATTGGCCAGGCTCAAGAAGAAGTGGGAGGAagcgaagaagaagaaggaaagTTTGAGGCGCGAACTCAACGCCTCGTACAACGAGAGTATCATGGAAAAATTGTCACGCGTATTGGGCGAGAGAGATACAAAATTGACGGATTTTTATGATTATCTGAAGCAACGAAAAATCGCAATAACGCGTCTCAAAGACGAGGACGTGATATCGTTGTACGAGGATCGCAACAACGCCGCGACAAAGAACAATTTTCCCGATCTCATAGACGAGTGTACACCGTTGGATTACATAGAGCAAGAAGATTATCTCGAGTGTGATTATTGCCCGGAGACTTTTGCCGTTCGCGATCTACTCGAGGAGCACCTCAAGACCCACGATTACAAGCTGATGTATTGGTGCGAGGATTGCCACTTGGAGTTCCCAACGGTGAAGAGCAAACGTGCACACAACAGCGAATGCATAAAGAAGCTCACCTGTCGTTATTGCGAGCTCGTGCTCGACTCCAAGGGCAAAAAGAGGCAACACGAGCAGAAACACGTCGACAACATTTACGGCCAGTTATGCGACGTGTGCGGCGAGAAATTCAAACACCAGGCAACCCTCGATCAGCACTTCAAGACCCAACACATGATATGGGAAAAGATATATCAGTGCAGCAAGTGCCCGAAGAAATTCGCCTTCAAGCAAAAATTGACGTTTCACATGAAATCCGTGCACACGACTTTGCGCGCATGGTTGTGCGAGGATTGCGGCGCTGACTTCAAGAATCCAGCGAGCCTGCGACATCATCGGATCCGCAAGCATCATCCGACCGGCAAGAAACGAGAGTGTACGGTGTGCAGTAAATTGGTGCCGTTCTACAGTCTCTCCAAGCACATGTACACCCACAAAGCTTACACGATACAGTGTCCGCACTGcgacaaaatgttcaaaaacagCTCGACCCTCAAGCAACACGTGAGAATACACGAGGATCAGCGCCAGTACAGATGCGACACTTGCGGCGTTGGCTTCAATCGTCGGGACGGGCTCAGGCTTCACATGAGGGTACATCAGAAGACCGACAGTCGCGCCCTCAAGGAATGCTCGTGTCAGATATGCTCGGAAAAGTTTCCCAATCACTCGATGCTCGTTATACATCGTAACAGGGTTCACAAGGACGGACGACAGTACACTTGTCACATATGCAACAGATCGATGCTCTCGACGAGATCCCTCGAGTGGCACATGTCTCACATACACAACGAAACGATGCCCGGCGGTGTCAAAGAAGAGGCCGAAACGCAAACCGAGAAGAAACGAGTCTCGTGCGTTCATTGCGACAAAACATTCAAGACCGAGATGATATTGCGCACTCACATAAAGAATACCCACATTGAGAAGAATCCTACGAAGTGCTTGGATTGCGAGCAAACGTTCACGTCGGATGTGCGCCTCAGGCATCACATGATGATAGCACACAATCGACTCGAGGGAACACTCACGTGTCCACACTGCCCGAAACGTTTCGTCAATCAATTACGACTCAAGACACACATGATATCACACTCCGAGGATCGACCTTACACGTGCGAGATATGCGGCTTCAATCTCAAAACGAAGATACAACTGATAAAACATCATCAGAATCGACACAGCGACGAGAGACCTCTGCAATGCCGCTATTGCCCGTGGAGGTGCAAACAAGTGAGCGCTCTCGTTTGCCACGAGAGAACTCACACCAACGAACGACCCTATTCGTGCATGGTTTGCCGTCAGAGATTCAAGTATCTCGGGGACAAGAACAAACACGAGAGACGACACGAGAGCCTCGGAGGATCCGGCTTCAAGAGAATCGTCGCCGGCAGAAACCTCAAACAGTCGAAGGTACAGCCCGAGGAAACTTCGACCTCGGATCAGGAACAGGTCGATTACGAGCAACCCGACGAGGAGGAACACCTCGTCGAGGAACAACAGTCCGAAGAGTACAACGAGGGAGACATTGTGAAATTCGAGGCCGAGAATATGGGCGAAGAATACGAGCAGGATTACGAACAGCAAGAATACGAGGAAACGTCGAGGGAAGCGTCGGAAGCTGCCGAAGTAATAATGAGCATGGAGGACACGACGGTGTACACGGAGGAAGTTACGGCCGACAATATCGAGTCGGCGGAAATGATAACTGACGAAATGATAACGAGTGACATATTGCAACCTGAGATAACCGTCGTTCATTTAGAGCAGCAAGACGATTCCGGCAAAATTCAAGTAATACCGGTTATGCTCTCGCTTCCCGATCTGAGTGACTCGAGTGCCGAAGTTAATCTGGCAACGGCTTCGATAATGTACAATAATTGA
Protein Sequence: MSVTNKSIAYVDAEANDPTNVDDNSNGHSSAHEALIRDLTSENVVILNDVLCPEERTLDAALRPTANVVTVGGSPSQECGAAEHAPDSFSKEAKQCWSSVAKLDRNDHDYSGVQRVVEVEKSTKMIDQNHCTIVKNSTASLLRTIKRKMATASHQRSSARVKNISELKKVTPRLKLVASSESRTPPPPLHPTKLNIPSAAITKNSSVQHSREQLKNYCRTCAGLKLPLVDIFSGKGMQMRLNQQMKHLVEIKADDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSISASLHSNDAATDVAGSTEDEQTPPIATINLTSSPERTTYTSEKREIDGSEYPTNVSTPAKVTDEQAVTNDTNNCESPTKVESRAAKPCVFNLSDDNDSIEEFDPEDPAFQSDVAEREVDCSPETPKSPRTPKSPRETNNIQRETSSPVATKVPPVSVVESGAERKPDPTKDPNKTVYQYDTKLQAYIKVEPPDDDRGSANVDNNIENGTGTKDNVKQPNILKRKISVGKNFLGNPVACAKQSDSTHVRSGQRDMKKPKLDVKNALNVSNENEEGIMYVTVKGSKPNELLLVKVKKMEKGPDGKKDDRKKQPNSEVPPSVEKILKKLEPAIIKREAELQLERSKILDMRERKIAEQIEEYKRRREKILGGSAGVPNALKFDEGTIRFVNPIDATVNPVDDGVRIKIEPIDDTEDARRVADPLNEQSCNETEETIEVKEDEDTEAYDNAGEYLARLARLKKKWEEAKKKKESLRRELNASYNESIMEKLSRVLGERDTKLTDFYDYLKQRKIAITRLKDEDVISLYEDRNNAATKNNFPDLIDECTPLDYIEQEDYLECDYCPETFAVRDLLEEHLKTHDYKLMYWCEDCHLEFPTVKSKRAHNSECIKKLTCRYCELVLDSKGKKRQHEQKHVDNIYGQLCDVCGEKFKHQATLDQHFKTQHMIWEKIYQCSKCPKKFAFKQKLTFHMKSVHTTLRAWLCEDCGADFKNPASLRHHRIRKHHPTGKKRECTVCSKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKTDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNETMPGGVKEEAETQTEKKRVSCVHCDKTFKTEMILRTHIKNTHIEKNPTKCLDCEQTFTSDVRLRHHMMIAHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCMVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNLKQSKVQPEETSTSDQEQVDYEQPDEEEHLVEEQQSEEYNEGDIVKFEAENMGEEYEQDYEQQEYEETSREASEAAEVIMSMEDTTVYTEEVTADNIESAEMITDEMITSDILQPEITVVHLEQQDDSGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01100823;
90% Identity: iTF_01102268; iTF_01100823; iTF_01103032;
80% Identity: -