Basic Information

Insect: Ophion costatus
Gene Symbol: gtf3a
Assembly: GCA_951751655.1
Location: OX632363.1:24938729-24947422[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0016 0.18 12.9 0.0 2 23 838 859 837 859 0.96

2 16 6.5 7.5e+02 1.5 1.0 2 23 892 913 891 913 0.95

3 16 0.001 0.12 13.4 1.8 3 23 922 943 921 943 0.98

4 16 0.0015 0.17 12.9 3.0 1 23 950 973 950 973 0.98

5 16 0.00062 0.071 14.1 2.1 3 23 981 1002 980 1003 0.96

6 16 0.19 21 6.3 0.3 2 23 1010 1030 1010 1030 0.96

7 16 1.5e-07 1.7e-05 25.5 2.1 2 23 1036 1057 1035 1057 0.97

8 16 2.4e-06 0.00027 21.7 0.2 1 23 1063 1085 1063 1085 0.99

9 16 0.0046 0.52 11.4 2.8 2 23 1097 1119 1096 1119 0.95

10 16 0.48 55 5.0 2.6 1 23 1125 1148 1125 1148 0.92

11 16 0.016 1.8 9.7 1.9 2 23 1170 1192 1169 1192 0.95

12 16 0.0021 0.24 12.5 1.2 2 23 1199 1221 1198 1221 0.96

13 16 4.3e-05 0.0049 17.8 1.7 2 23 1229 1250 1228 1250 0.97

14 16 0.0013 0.15 13.1 2.3 1 23 1256 1279 1256 1279 0.96

15 16 0.34 39 5.5 3.2 2 23 1286 1307 1285 1307 0.96

16 16 0.036 4.1 8.6 2.4 1 23 1313 1335 1313 1335 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0016	0.18	12.9	0.0	2	23	838	859	837	859	0.96
2	16	6.5	7.5e+02	1.5	1.0	2	23	892	913	891	913	0.95
3	16	0.001	0.12	13.4	1.8	3	23	922	943	921	943	0.98
4	16	0.0015	0.17	12.9	3.0	1	23	950	973	950	973	0.98
5	16	0.00062	0.071	14.1	2.1	3	23	981	1002	980	1003	0.96
6	16	0.19	21	6.3	0.3	2	23	1010	1030	1010	1030	0.96
7	16	1.5e-07	1.7e-05	25.5	2.1	2	23	1036	1057	1035	1057	0.97
8	16	2.4e-06	0.00027	21.7	0.2	1	23	1063	1085	1063	1085	0.99
9	16	0.0046	0.52	11.4	2.8	2	23	1097	1119	1096	1119	0.95
10	16	0.48	55	5.0	2.6	1	23	1125	1148	1125	1148	0.92
11	16	0.016	1.8	9.7	1.9	2	23	1170	1192	1169	1192	0.95
12	16	0.0021	0.24	12.5	1.2	2	23	1199	1221	1198	1221	0.96
13	16	4.3e-05	0.0049	17.8	1.7	2	23	1229	1250	1228	1250	0.97
14	16	0.0013	0.15	13.1	2.3	1	23	1256	1279	1256	1279	0.96
15	16	0.34	39	5.5	3.2	2	23	1286	1307	1285	1307	0.96
16	16	0.036	4.1	8.6	2.4	1	23	1313	1335	1313	1335	0.98

Sequence Information

Coding Sequence: ATGAGCGAAGCGAACAAAAGTCTTGCGAACGTAGGCGCGGAGGCGAATGATCCGATTAATTTTGATGACAATTCGAACGGGCATTCGTCGGCGCATGAGGCCCTCATACGGGATCTCACCTCGGAGAATGTTGTCATTCTCAACGATGTTCTCTGCCCTAAGGAGCGCGCTCAGGACGCCGCTCTACGTCCGACGGACGTCACTGTAGGTGGGTCGCCGTTGCAGGAGTACGGCGCCGCCGAGCACGCCCCAGATTCGTTCTCCAAGGAGGAGAAGCAATGTCGGAGCTCCGTGGCAAAGTTGGACATGAACGATCACGACTACAGCGGCGTTCAGCGGGTCGTCGAGGTGGAAAAAGCGACGAAGACGGTGGACCGAAATCATTGTACGGTTGTGAAGAACAGCACGGCATCGTTGTTGAGGACGATAAAGCGCAAGACGTCGCATCAGAGATCGAGCGCTCGAGTGAAGAATATAAGCGAGTTGAAGAAGGTGACGCCGCGATTGAAACTCGTGACATCGTCGGAGTCAAGAACGCCGCCGTCTACGCCGCATCTCGCCAAGCTGAATATCCCGAGTGCGGCGATAACGAAGGATTCGAGTGTACAGCATTCGCACGAACAGTTGAAGAACTATTGTCGCACATGCGCCGGTCTGAAATTACCGCTGGTCGATATATTCAGCGGGAAAGGAATGCAGATGCGACTCAATCAGCAGATGAAACATTTGGTCGAGATAAAGTCGGACGACAGTCTCTCGACTCAGATGTGCATGGATTGCATATGCGATCTGAAGATGAGTTACAAATTTTTCATGCAAATAAAAAAGGCCCAGGTGAAGTTGCAATCGATGAGCGCCTCGTTGCACAGTAACGACGCAGCGACGGAAGTTGCCGGGAGCACCGAGGACGAGCAGCCGCCACCGATCGCCACGATAAACTTGACCAGCAGTCCGGAGCGTACGACTTGTGCTTCGGAAAAGGGAGAAATCGACGGCTCCGCATGCGCGACGAATGCGTCAAGCCCAGTCAAAGTTACGGAGGACCGAGTCGTAACGAACGAGACGAATCATCGCGAGTCTCCGACGAAGGCTGAGTCGCGTGCGGCTAAGCCTTGCGCTCTCAATCTCAGCGACGACAACGACTCCATCGAGGAATTCGATCCGGAGGATCCAGCCTTCCAGTCCGACGTGGTCGAATACGAGGTTGATTGTTCCCCGGAAGCCCCAAAGAGTCCCCGGGCTCTCAAAAGTCCCCGCGAAACGCAAAACACTCAAGAAACACGGAGCCCAGTGGCGACGAAAGTACCACCGGTGTCCGCTGTCGAGTCCGGATCGGAGCGGAAACCGGACCCGAGCAAGGATCCGAACAAAACGGTCTATCAGTACGACACGACGCTGCAGGCTTACATAAAAGTCGAGCCGCCGGACGACGATCACGAGAGCGCGATCGTCGACAAGAAAATCGAAAACGGCACCGACACCAAGGAACTCAAACACCCGAACATCCTCAAGCGCAAAATCTCCGTTGGCAAGAATTTTTTAGGGAATCCCGTGGCGTGCGCCAAACAGTCGGATTCGACGCACGTCAGATCGGGACAGCGAGACATGAAAAAGCCAAAATTGGACGTAAAAAACGCGCTAAACGTTTCGAACGAGAACGAGGAAGGTATAATGTACGTGACGGTGAAAGGATCCAAGCCCAACGAGCTGTTGCTCGTAAAGgtcaaaaaaatggagaaaggcGCGGACGGTAAGAAGGACGAGAGGAAGAAGCAGCCGAGCAGCGAGGTCGTTCCGTCCGTCGAGCAAATGCTGAAGAAGCTCGAACCCGCGATCATAAAGAAGGAAGCGGAATTGCAACTGGAACGTTCGAGGATACTGGACATGAGGGAACGCAAGATAGCCGAGCAGATCGAGGAGTACAAGAGGCGGCGAGAGAAGATACTGGGCGGTAGCGCGGGTGTGCCGAACGCTTTGAAATTCGAGGAGGGTACGATACGTTTTGTGAATCCGGTCGACGCCGAGGTAAATACCGTGGAGGACGATGTGCGAATCAAGATCGAGCCGATCGACGATCCGGAGGACGTGCGCCACGTGGTAGCCCCGGTAAACGAGCAATCGAGCAACGAGACCGAGGAAACGGTCGAGGTGAAGGAAGACGAGGACACCGAGGCGTACGACAACGCGGGCGAGTATCTCGCGCGATTGGCCAGGCTCAAGAAGAAGTGGGAGGAGGCGAAGAGGAAGAAGGAAAGTTTGAGGCGCGAACTCAACGCCACGTACAACGAGGGTAACATGGAAAAACTGTCACGCGTACTCGGCGAGAGGGATACAAATTTGACTGATTTTCAGGATTATCTGAAGCAACGAAAAATCGCAATAACGCGCCTCAAAGACGAAGACGTGATATCGTTGTACGAGGATCGCAACAGCGCCGCGGCCAAGAACAACTTTCCCGATCTCATCGACGCGAGTACACCCTTGGATTACATAGAGCAAGAAGATTATCTCGAGTGTGATTATTGCCCGGAGACTTACGCGGTTCGCGACCTACTCGAGGAGCACCTCAAGGGCCACGATTACAAGCTCATGTATTGGTGCGAGGATTGCTACTTGGAGTTCCCAACGGTTAAGAGCAAACGTGCACACAACAGCGAATGCATGAAGAAGCTCACCTGTCGTTATTGCGAGCTCATACTCGACTCCAAGGGCAAGAAGAGGCAACACGAGCAGAAACACGTCGACAGCATCTACGGACAGCTGTGCGACGTGTGCGGCGAGAAATTCAAACACCAGGCAACCCTCGATCAGCACTTCAAGACCCAACACATGATCTGGGAAAAGATATATCAGTGCAGCAAGTGCCCGAAGAAATTCGCCTTCAAGCAAAAATTGACCTTTCACATGAAATCCGTGCACACGACTTTGCGCGCATGGTTGTGCGAGGATTGCGGCGCCGATTTCAAGAATCCAGCCAGCCTGCGACACCATCGGATCCGCAAGCATCATCCGACCGGCAAGAAGCGGGAGTGTCCGGTGTGCCGTAAAATGGTGCCGTTCTACAGTCTCTCCAAGCACATGTACACCCACAAAGCTTACACGATACAGTGTCCGCACTGCgacaaaatgttcaaaaacagCTCGACCCTCAAGCAACACGTGCGAATACACGAGGATCAGCGCCAGTACAGATGCGACACTTGCGGCGTAGGTTTCAATCGTCGGGACGGGCTCAGGCTTCACATGAGGGTACATCAGAAGACCGACAGTCGCGCCCTCAAGGAATGCTCGTGTCAGATATGCTCGGAAAAGTTTCCCAATCACTCGATGCTCGTTATACATCGTAATCGCGTGCACAAGGACGGGAGGCAGTACACTTGTCACATATGCAACAGATCGATGCTCTCGACGAGATCCCTCGAGTGGCACATGTCTCACATACACAACGAAACGATGCCGGGCGGCGTCAAGGAAGAGGCCGAAACGCAAACCGAGAAGAAACGAGTCTCGTGCGCCCATTGCGAAAAAACTTTCAAGACCGAGATGATATTGCGCACTCACATAAAGAATACCCACATAGAGAAGAATCCCACCAAGTGCTTGGATTGCGAGCAAACCTTCACGTCGGACGTTCGCCTCAGGCATCACATGATGATAGCACACAATCGACTCGAGGGAACACTCACGTGTCCACACTGCCCGAAACGTTTCGTCAATCAATTACGACTCAAGACACACATGATATCGCACTCCGAGGATCGACCTTACACATGCGAGATATGCGGCTTCAATCTCAAAACGAAGATACAACTGATTAAGCATCATCAGAATCGACACAGCGACGAGAGACCTCTGCAATGCCGTTATTGCCCGTGGAGGTGCAAACAAGTGAGCGCTCTCGTTTGCCACGAGAGAACTCACACCAACGAACGACCCTACTCGTGCATGGTCTGCCGTCAGAGATTCAAGTATCTCGGCGACAAGAACAAACACGAGAGACGACACGAGAGCCTCGGAGGCTCCGGCTTCAAGAGAATCGTCGCCGGCCGAAACCTCAAACACCCGAAGATACAGCCCGAGGAAACTTCTACCTCGGATCAGGAACAGGTCGATTACGAGCAACGCGACGAGGAGGAACACCTCGTCGAGGAACAACAGTCCGAAGAGTACACCGAGGGAGACATTGTGAAATTCGAGGCCGAGAATATGGGCGAAGAATACGAGCAGGATTACGAACAGCAAGAATACGAGGAGACGTCGAGGGAAGCGTCGGAAGCTGCCGAAGTAATAATGAGCATGGAGGACACGACGGTGTACACGGAGGAAGTTACGGCCGACAATATCGAGTCGGCGGAAATGATAACCGACGAGATAATAACGAGTGACATATTGGAACCTGACATAACCGTCGTTCATTTAGAGCAGCAAGACGATTCCGGCAAAATTCAAGTAATACCGGTTATGCTGTCGCTTCCCGATCTGAGTGACTCGAGTGCCGAAGTTAATCTGGCAACGGCTTCGATAATGTACAATAATTGA
Protein Sequence: MSEANKSLANVGAEANDPINFDDNSNGHSSAHEALIRDLTSENVVILNDVLCPKERAQDAALRPTDVTVGGSPLQEYGAAEHAPDSFSKEEKQCRSSVAKLDMNDHDYSGVQRVVEVEKATKTVDRNHCTVVKNSTASLLRTIKRKTSHQRSSARVKNISELKKVTPRLKLVTSSESRTPPSTPHLAKLNIPSAAITKDSSVQHSHEQLKNYCRTCAGLKLPLVDIFSGKGMQMRLNQQMKHLVEIKSDDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSMSASLHSNDAATEVAGSTEDEQPPPIATINLTSSPERTTCASEKGEIDGSACATNASSPVKVTEDRVVTNETNHRESPTKAESRAAKPCALNLSDDNDSIEEFDPEDPAFQSDVVEYEVDCSPEAPKSPRALKSPRETQNTQETRSPVATKVPPVSAVESGSERKPDPSKDPNKTVYQYDTTLQAYIKVEPPDDDHESAIVDKKIENGTDTKELKHPNILKRKISVGKNFLGNPVACAKQSDSTHVRSGQRDMKKPKLDVKNALNVSNENEEGIMYVTVKGSKPNELLLVKVKKMEKGADGKKDERKKQPSSEVVPSVEQMLKKLEPAIIKKEAELQLERSRILDMRERKIAEQIEEYKRRREKILGGSAGVPNALKFEEGTIRFVNPVDAEVNTVEDDVRIKIEPIDDPEDVRHVVAPVNEQSSNETEETVEVKEDEDTEAYDNAGEYLARLARLKKKWEEAKRKKESLRRELNATYNEGNMEKLSRVLGERDTNLTDFQDYLKQRKIAITRLKDEDVISLYEDRNSAAAKNNFPDLIDASTPLDYIEQEDYLECDYCPETYAVRDLLEEHLKGHDYKLMYWCEDCYLEFPTVKSKRAHNSECMKKLTCRYCELILDSKGKKRQHEQKHVDSIYGQLCDVCGEKFKHQATLDQHFKTQHMIWEKIYQCSKCPKKFAFKQKLTFHMKSVHTTLRAWLCEDCGADFKNPASLRHHRIRKHHPTGKKRECPVCRKMVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKTDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNETMPGGVKEEAETQTEKKRVSCAHCEKTFKTEMILRTHIKNTHIEKNPTKCLDCEQTFTSDVRLRHHMMIAHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCMVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNLKHPKIQPEETSTSDQEQVDYEQRDEEEHLVEEQQSEEYTEGDIVKFEAENMGEEYEQDYEQQEYEETSREASEAAEVIMSMEDTTVYTEEVTADNIESAEMITDEIITSDILEPDITVVHLEQQDDSGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01101558; iTF_01103757; iTF_01102268; iTF_01103032;
90% Identity: iTF_01101558;
80% Identity: -