Basic Information

Insect: Ophion ellenae
Gene Symbol: -
Assembly: GCA_963210295.1
Location: OY723385.1:47771955-47776090[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00029 0.038 15.3 3.9 1 23 245 267 245 267 0.98

2 11 0.032 4.1 8.9 12.0 1 23 273 295 273 295 0.95

3 11 6.8e-05 0.0088 17.3 6.6 1 23 301 323 301 323 0.99

4 11 0.00047 0.061 14.6 1.6 1 23 329 351 329 351 0.95

5 11 1.5e-06 0.00019 22.5 1.9 1 23 357 379 357 379 0.97

6 11 3.1e-05 0.004 18.4 1.1 1 23 385 407 385 407 0.97

7 11 8.9e-05 0.012 16.9 1.6 1 23 412 434 412 434 0.97

8 11 4.3e-05 0.0056 17.9 0.0 1 23 440 462 440 462 0.96

9 11 4.7e-05 0.006 17.8 0.2 2 23 474 495 473 495 0.96

10 11 6e-06 0.00078 20.6 2.5 3 23 563 583 561 583 0.96

11 11 5e-05 0.0065 17.7 4.6 1 23 593 615 593 615 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00029	0.038	15.3	3.9	1	23	245	267	245	267	0.98
2	11	0.032	4.1	8.9	12.0	1	23	273	295	273	295	0.95
3	11	6.8e-05	0.0088	17.3	6.6	1	23	301	323	301	323	0.99
4	11	0.00047	0.061	14.6	1.6	1	23	329	351	329	351	0.95
5	11	1.5e-06	0.00019	22.5	1.9	1	23	357	379	357	379	0.97
6	11	3.1e-05	0.004	18.4	1.1	1	23	385	407	385	407	0.97
7	11	8.9e-05	0.012	16.9	1.6	1	23	412	434	412	434	0.97
8	11	4.3e-05	0.0056	17.9	0.0	1	23	440	462	440	462	0.96
9	11	4.7e-05	0.006	17.8	0.2	2	23	474	495	473	495	0.96
10	11	6e-06	0.00078	20.6	2.5	3	23	563	583	561	583	0.96
11	11	5e-05	0.0065	17.7	4.6	1	23	593	615	593	615	0.96

Sequence Information

Coding Sequence: ATGTGCACGACGCCTGGCAATGCGGGCGCCGGTTTCGGCTACGCGTGGTCGTTCAGCGGCCCGGGTACCGAGACCAGGGAGAATTCCCAGGCGGACCTAGCCGCCAACATCAATTACGCGGTCAACAACAATCAGGATCAAGGCTCCGGACAGAAGATTCAGGTGGACATTAAGCCGGCGAAGGTGGCTATAAGCGCGACGCCGCGCAGGCCCATGTTCTCCATGAACGAGAGTTGCCAACAGACGCCGACTACGACTACGCATCACGGACACGCAGCGGTAGGTCACAATCAGTCTCACGTCAGAACAAAGAAGCATCACGACGTTTTTTCCCTGACCTGCGACAAGGGAGGTTGCAACTGCGACGCGGCGCATCCGACGCCGCCGCCTTCGCTGTTCTCCAACGCGCTGGTCTTCACAACTGCGGACAAGCACGCTATGAGCAAACACTTCATGACGCCGCTGGGACCTCTTCAACTGACCGCCGAGGAGTGCAACGAGATACTCATGAAGAGAGCGGCGGCTGCCTCCAATCAGCCAAACTCCAACAACGTGGCGACCAGTCAGGCCGATGGCGgaggtggcggcggcggcggtgccagcggcggcggcggcggttcGCACTTCGGTCACGTGCTCGGTCACGTAAACGCGACGCAGATCGAGCCGACCAAGGCGGTGAAGCAACAGCAGGACATGGGTAGCCAGGTGCGAGTCCCCAAGGAGAGGCCCTACTCTTGCTCCGAGTGCGGCAAGTCCTTCCTACTCAAGCATCATCTGACGACTCACGCGCGGGTACACACGGGCGAGCGTCCCCACATATGCGTACACTGCGGCAAAACATTCGCTCACAAACACTGTCTACACACTCATCTCTTGCTACACAGCGCTGAGAGACCCTATCAGTGTCGCgaatgcaaaaaatcgtttaCCCTGAAGCATCATTTGGTGACGCACACGCGCGTTCACACCCGCGAAAGACCGTTCGTTTGTCAGGAGTGCGGACGCGCGTTTCCCCTGAAGCGTCATCTCGTGACGCATAGTAAATTTCACTCGGGCGAGAGACCCTTCGTATGCGAAGAGTGCGGCGAGTCCTTCTCCCAGAAGGATCATCTCACGATGCATTCGCGCTTCCACGGTAGCTTACATCCGTTCGTTTGTCACGATTGCGGTGCTACCTTCCAGAGGAAATTCGAGCTCGTCAATCACGGGCGTCTCCACGGACGCGTGCCCCATTCTTGTACCGTTTGTGGCAAGGAGTTCCTCCAGAAGAGAACGCTTCTCGCTCATATGCGTCTGCACACCGGTGAAACACCCTTCGCCTGTACCGTATGCGGCGAGGCTTTCCCGCGCAAGGTCGACCTCGTCGCCCACTCCAAGATACACAACAACAATACCAACCCGGATGAGAAATGTCTCACGTGCAGGGAATGTGGTTTGGATTTTTCGAATCGGGAGGCACTCACGTTGCACTTGAGGTTACACTCGGGCGATCGTACTCTCGTCACCGACCTTTGCGGACTAGCCGCGGCCTTTCAACAAACGCCAGGACACTTTTTAACGCCAAACGCCACTGGCACTCATCAGATGAACGGGCCAATCGGTACGCCGGGGGTGAGTCACATGCACGGAGCGACGCAGACCTCGCCGCCGGTGTGTTCGGGCCCGAAGCCGAAGCCGCATCTATGCCCGGATTGCGGTCGCGGTTTTGCCCAGAAGCACGGCCTCTCCCAGCACCAGAGAAGACACACGGACGGGAGTTGTCACATAAGATCGCACATTTGCGACAAGTGCGGCAAGGCCTTCTTTCAGAAGAATCACTTGTTGTTGCACCAGCGCCAGCACATGGATCCACCGCCGAGTATACTGCGACAGCAACAGAGACAGGCGGCTCAGGCGGCTGCCCAGCAGGCCCAGCAAGcgcaacagcaacaacagcagGTCCAGCAACAGCAGCAGGGCTCTAGCCAGCAGGCCCAGCAGCAGGCCCAGGTGCAACAGCAAgcacagcagcaacagcagcaggtACATCAGCAGGCCCAACAACAAGCCCAACAGCAAGCCCAGCAGCAAGCCCAGCAACAGGCATGCACCGTAGACGCCAAGTCGATACAGCTCCAGGCGATACAGCAACAGGTACAACAACAGGTACAGCAGCAAgtacagcagcagcaacagcagcaacaacaacaacaacagcagcaacagcaacaacaggCGTGCTCGGTGGACGCAAAAGCAATACAATTGAACGTCACCATGTGA
Protein Sequence: MCTTPGNAGAGFGYAWSFSGPGTETRENSQADLAANINYAVNNNQDQGSGQKIQVDIKPAKVAISATPRRPMFSMNESCQQTPTTTTHHGHAAVGHNQSHVRTKKHHDVFSLTCDKGGCNCDAAHPTPPPSLFSNALVFTTADKHAMSKHFMTPLGPLQLTAEECNEILMKRAAAASNQPNSNNVATSQADGGGGGGGGASGGGGGSHFGHVLGHVNATQIEPTKAVKQQQDMGSQVRVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICVHCGKTFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPFVCEECGESFSQKDHLTMHSRFHGSLHPFVCHDCGATFQRKFELVNHGRLHGRVPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKVDLVAHSKIHNNNTNPDEKCLTCRECGLDFSNREALTLHLRLHSGDRTLVTDLCGLAAAFQQTPGHFLTPNATGTHQMNGPIGTPGVSHMHGATQTSPPVCSGPKPKPHLCPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHICDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQQAQQAQQQQQQVQQQQQGSSQQAQQQAQVQQQAQQQQQQVHQQAQQQAQQQAQQQAQQQACTVDAKSIQLQAIQQQVQQQVQQQVQQQQQQQQQQQQQQQQQQACSVDAKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509061;
90% Identity: iTF_01056261;
80% Identity: -