Oell024787.1
Basic Information
- Insect
- Ophion ellenae
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963210295.1
- Location
- OY723394.1:22910062-22918550[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.8e-115 1.3e-110 370.3 29.9 1 300 29 327 29 327 0.97 2 3 0.004 1.3e+02 2.5 2.6 122 171 327 376 325 379 0.91 3 3 0.019 6.1e+02 0.3 5.7 193 240 357 403 339 404 0.69
Sequence Information
- Coding Sequence
- atggaGTCGACTATAGCGGGGAGAAGGCGTAACGCTACGAGGCATTCTGCCGAGGATCAGGCCCTCGACCAGATAGCCAAAGAGGCAGAGGCGAGACTCGCCGCACGGAGACAGGCCCGCGCCGAAGCACGTGAAATTCGGATGCGCGAATTGGAGAGACAACAAAAAGAGGCGGAGGAGAATGCTGATAGGGTTTACGATATGTGCTCGGCAGACGGGAACAGAACGATGAGAGTGACGCCAGATCCAGTGAGAACATCACGTATACTCGCAAATGCGAATAATTTTCAGTCGAGTAGAAGATCGTCGGAAGATTCGTTGGAAGATGCAGGACTAAGCAGAGATCTGAGATTAGAACTGAAAGAATTCGAGGAGAAGTTTAGAAAAGCGATGATAGCGAACGCCCAACTGGACAACGAAAAGTCATCGTACGCGTATCAAGTCGATTTGTTGAAGGACAAGCTCGAAGAGTTGGACGAGACCACAGCTCAACTGAGACGCGAGCTCAGGGAAAAGAATAGAGAAGCGGAACAGTTAAAACGTATAAGTCAACGATTAAAGGAAGATTTCGATGTATGCAGAGCTCAATTGTTGGAAAGAGACACTCTTATTCAGGAAAATGGACTCGTCATAGTAGACGATGAAGGTAGCGGAGACGAAGATCCTGAAGCGCTAAACGGATCTTGTTACAGGAAAAGAGTACTAGTCAGCACAGAAGCTGCCGAGTTATTACAAAATGCTGGCGAAGGTTCGCTAGACGTTCGATTGAGGAAATTTGCTTCCGAAAAGAAGGAACTGCAAGATGAAATTGGGCACTTGAGGTTGGAGCTGGAGGAGGCAAAGAGTCGTTTGAGATCGGAAAAATCGCCAGGTTCCGTATTAGGTGGACTTTCCGACTCCGAGGACGTTCAGAGAGAAACGAACAAATTATTGGCGGATTACAAATTTAAGATGCAAAAAGCTGAACAAGACATGTCCACGTTGCAGGCGACCGTTGCTAGGCTAGAAAGTCAAGTTATACGTTACAAATCCGCAGCCGAAGCGTCGGAAAAGGCGGAAGATGAACTCAAAGTTGAGAAGAGGAAATTACAAAGAGAAGTCCGCGAATCGCAAGGTCGCGTTGAGGAACTTGAAACGGCAAATTCCCACTTGCAGAGACGATTGGACAAACTTAAAAATGCTAAATCCGCGCTACTCAAAGACGTCTCACAAAGATAA
- Protein Sequence
- MESTIAGRRRNATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSADGNRTMRVTPDPVRTSRILANANNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELDETTAQLRRELREKNREAEQLKRISQRLKEDFDVCRAQLLERDTLIQENGLVIVDDEGSGDEDPEALNGSCYRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIGHLRLELEEAKSRLRSEKSPGSVLGGLSDSEDVQRETNKLLADYKFKMQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKDVSQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01102050;
- 80% Identity
- iTF_01102050;