Oell026816.1
Basic Information
- Insect
- Ophion ellenae
- Gene Symbol
- lola
- Assembly
- GCA_963210295.1
- Location
- OY723395.1:17342177-17352561[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-16 4e-13 49.7 0.0 2 42 408 449 407 462 0.95
Sequence Information
- Coding Sequence
- ATGTCTATGCAACAGTTCTGTTTACGATGGAACAATCATCAGCCAAATTTCATATCCGTCTTCTCGTCGCTGCTGAACAATGAGACTCTGGTGGACGTTACTTTGGCCGCCGAGGGTCGTCATCTCCAAGCTCACAAAGTCGTACTATCGGCGTGCAGCACATACTTTCAGTCCCTCTTCACCGTCAATCCCTGTCAGCATCCTATCGTCATTCTCAAAGATGTCAAATTCTCCGATCTCAAGATCATGGTTGATTTCATGTATTACGGCGAAGTCAATGTTTCCCAGGATCAATTGCCCTCGATAATCAAGACAGCGGAAAGTTTGAAGATCAAGGGCCTCGCGGAGATGCACACGGCCTCACTGACAAAGTGGCCAAGCGAAACCGGTGGTGCCGATTGCGGAGAGTCCTGTTCGCCGAGTCCCTCGCCGTTGTCGCCCTCCTTCCGTAGAAAACGCTTGCGCAAGGGTTCGACGGGCTCGACTTCCGGTGGATCGGCCGACAAGACGGAGGAAATGAGCGAGATCACACTCGTCGCCACGAACATAGTTAAACCGGAGCCGCACATTGTACCCCAGGACGGAGCAGGCGACACCCTCAGGCGCCCCGTCAACACCACCACCGACACCCAAGGCAGCATCGACGAAGATCAAATATCCATCATGAGCAACATGGAAAGCAGCACGACGACGACGCCCGCTCAGAGCGAAGGTTCTTTGCAGGAAGTGGGCCATCACGCCGGAAACATCGGCCACGGCTCCCTGTCTCATCCACCGAGTCACCAAGGATTGCAATGGACAATAATGGAGCATACGTATCCGCGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGGTCCAAGCTTCGTCGGCATTCACGACACCCGAAATAGGCGCAGCCTCGAGCCTCAGCGAGCATCAGTATCAATCGGGTGGTGGCGGTGGCGGTGGTGGCGGCACGAGTACGACAGCGTCATCTAATTGCGGGCTGACCAGCTACCCGAACTCGTCGATGCAGCACGCTTCGAATACGGATGGCGGCGGTGCTGCtggcgctgctgctgctgctgctgctggtgGTGGAGGAAGCGGTAACGGTGGCGGAGGTAACGGACAGAGCGGTGGTCTCTCGCCGGCGCAGTGCTCGAGCAATTGTCAGAGTCCTTGCGCTAGTCCGCAAGCAACTATAAAGAGAAAAAGATCGACGAATCCCCAAGCCGACGAAAATTTTATACGAGCCCTGGAGGCGGTGCGTTACGGTGGTATAGGATTTTGTAAAGCCGCCCGAATGTTCGGCGTTAACAATCGGACCTTGTGGCTCGAGTACAAAAAACGGGGCTATCCGAACAATCGTCCGAGCTTGAAGTCCCGGGTGAAGCAAGAATCGAGCGCGTCACCGCCGCCACCACCACCGCCGGCGACTACCTCGCAGACGGTCGATTCGCAGAGTCCGACACCTATGGGACCACCAACGACGCCTCACAGTACACACAACGCGCATCCGACCCACACGATGCTCACCGCACACAGTCCCCACGCGATGCTCTCCGGTTACATCGACAACAGACACTCCGATTATACACTACCGAGCTCGACGATGCCGATCAACTTGCACGGCGTTAATTACAACTCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSETGGADCGESCSPSPSPLSPSFRRKRLRKGSTGSTSGGSADKTEEMSEITLVATNIVKPEPHIVPQDGAGDTLRRPVNTTTDTQGSIDEDQISIMSNMESSTTTTPAQSEGSLQEVGHHAGNIGHGSLSHPPSHQGLQWTIMEHTYPRFALSSCQTNLSVQASSAFTTPEIGAASSLSEHQYQSGGGGGGGGGTSTTASSNCGLTSYPNSSMQHASNTDGGGAAGAAAAAAAGGGGSGNGGGGNGQSGGLSPAQCSSNCQSPCASPQATIKRKRSTNPQADENFIRALEAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQESSASPPPPPPPATTSQTVDSQSPTPMGPPTTPHSTHNAHPTHTMLTAHSPHAMLSGYIDNRHSDYTLPSSTMPINLHGVNYNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629212;
- 90% Identity
- iTF_01101461; iTF_01102924; iTF_01102698; iTF_01101967; iTF_01102182; iTF_01100725; iTF_01100501; iTF_01103671; iTF_01103462;
- 80% Identity
- iTF_01101461;