Oell011494.2
Basic Information
- Insect
- Ophion ellenae
- Gene Symbol
- retn
- Assembly
- GCA_963210295.1
- Location
- OY723388.1:20329891-20351162[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-19 9.3e-16 58.8 0.0 17 89 19 89 11 89 0.92
Sequence Information
- Coding Sequence
- ATGCGGTGGCTTGTGCGACCAATCTGCAAAGACAATTTTGTAGGATTTCTGTCACGAACGCCGATCAATCGTTTGCCAATAATGGCGAAGTCGGTGCTCGATCTCTACGAGCTCTTCCAGTTGGTTATAGCCCGGGGTGGCCTAGTCGACGTTATAAACAAGAAGCTCTGGCAGGAAATCATCAAGGGCCTACACCTGCCGTCTAGTATCACATCCGCCGCGTTCACGCTTCGGACCCAGTACATGAAGTACCTCTATCCGTACGAGGGTGAGAAATTGGGCCTTTCAACGCCGTCCGAGCTCCAAGCGGCGATAGACGGTAATCGTCGCGAGGGACGGAGAAGCAGCTACGGGGCTTACGGAGGCGGTGGCGGTGCCGAGAGTATGATGCAGAGAAACCCGCACACACCTGGCGCAATGGCGTTGCACTCGCAAATGTCACCGCTCTCGCTCGTGTCGGCGGTCGCCGGTGGTCAGCATCACGGATCGCAGTCCCTCGTCAATGGTAGCGCCGCTCACACACCTATGCCGCATCATCCTCATCATCCGCAACATCCTCAAGGTCCGATCGGCCCCATACCGGGACTGGCACCTGCCGAATTCGAGGCCCGCATGGTCGAGTACGTGAAATTGCTGAACAAGGAACTGAGGGACGCAGGTGTGACGACACCACCGCCGATGATCCGTCGACAGGGCAGCGCAACGCCACCCTCGACTACGCCACCACGCGACAACGCCTTCAGCGCCCTCGAAATGTCGCGGCTAACACTATGGAACATGTACAACAACAATTCACTTTATCCTGGGGTCGGCCATCAGCCGCCACTCTCGCCACAGGCCTCGAACTCACCGCATCGACAGGCCGCCAGCCCGGAACCACAGCGCGAAGCACTCGATCTTGGCCTCAGGTCGTCACCACTGTCCGCGTCACCAACGAGACACAGTCCTCCCTCCTCGAGCAGTAGCATCCAGGTCAAGAGGGATCGAGATCTCACAGGTACACCTGGTGTGCCACCTACCAAGAGGCTACACTCGGACGACGATAGTCCCAATGAGAAGAGCGTACCGGCATTCGCAGGCACTCACATCAAAATCTCCAACCGTGGTGACGGACGGAACGGCGATAACTCTCTCGTCGTCAGTATGGAACTCAACGGAGTAATGTACCAGGGTGTATTGTTCGCACAGACAGACGGCAGGAGTTCAACGACCGCCACCAATAACAACACAAAAGCTGCGAGAAGCATCGTCTCGTGA
- Protein Sequence
- MRWLVRPICKDNFVGFLSRTPINRLPIMAKSVLDLYELFQLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYEGEKLGLSTPSELQAAIDGNRREGRRSSYGAYGGGGGAESMMQRNPHTPGAMALHSQMSPLSLVSAVAGGQHHGSQSLVNGSAAHTPMPHHPHHPQHPQGPIGPIPGLAPAEFEARMVEYVKLLNKELRDAGVTTPPPMIRRQGSATPPSTTPPRDNAFSALEMSRLTLWNMYNNNSLYPGVGHQPPLSPQASNSPHRQAASPEPQREALDLGLRSSPLSASPTRHSPPSSSSSIQVKRDRDLTGTPGVPPTKRLHSDDDSPNEKSVPAFAGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDGRSSTTATNNNTKAARSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129126;
- 90% Identity
- iTF_01056577;
- 80% Identity
- iTF_01102567;