Basic Information

Insect: Ophion costatus
Gene Symbol: stc
Assembly: GCA_951751655.1
Location: OX632359.1:36561259-36570398[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 2.6e+04 -4.4 1.6 15 19 529 533 528 533 0.81

2 15 0.14 1.8e+03 -0.4 0.1 4 10 562 568 561 569 0.94

3 15 1.8e-06 0.024 15.2 10.8 4 18 579 593 577 594 0.94

4 15 1.9e-06 0.025 15.2 15.3 1 18 630 647 630 648 0.92

5 15 0.57 7.5e+03 -2.4 0.6 1 5 657 661 657 666 0.83

6 15 0.28 3.7e+03 -1.4 1.5 5 10 675 680 675 680 0.96

7 15 3.4e-08 0.00045 20.7 13.8 1 19 686 704 686 704 0.97

8 15 1.9e-05 0.25 11.9 13.4 4 18 751 765 744 766 0.86

9 15 1.6 2.1e+04 -3.8 2.0 5 10 795 800 795 800 0.93

10 15 0.0033 44 4.8 11.2 1 11 806 816 806 828 0.88

11 15 1.9e-07 0.0025 18.3 19.5 1 19 833 851 833 851 0.98

12 15 0.47 6.3e+03 -2.1 0.7 5 10 879 884 878 884 0.94

13 15 2 2.6e+04 -6.6 9.4 10 19 898 908 887 908 0.75

14 15 1.6e-06 0.022 15.3 13.2 1 16 944 959 944 970 0.86

15 15 7.1e-06 0.093 13.3 13.2 1 19 976 995 976 995 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	2.6e+04	-4.4	1.6	15	19	529	533	528	533	0.81
2	15	0.14	1.8e+03	-0.4	0.1	4	10	562	568	561	569	0.94
3	15	1.8e-06	0.024	15.2	10.8	4	18	579	593	577	594	0.94
4	15	1.9e-06	0.025	15.2	15.3	1	18	630	647	630	648	0.92
5	15	0.57	7.5e+03	-2.4	0.6	1	5	657	661	657	666	0.83
6	15	0.28	3.7e+03	-1.4	1.5	5	10	675	680	675	680	0.96
7	15	3.4e-08	0.00045	20.7	13.8	1	19	686	704	686	704	0.97
8	15	1.9e-05	0.25	11.9	13.4	4	18	751	765	744	766	0.86
9	15	1.6	2.1e+04	-3.8	2.0	5	10	795	800	795	800	0.93
10	15	0.0033	44	4.8	11.2	1	11	806	816	806	828	0.88
11	15	1.9e-07	0.0025	18.3	19.5	1	19	833	851	833	851	0.98
12	15	0.47	6.3e+03	-2.1	0.7	5	10	879	884	878	884	0.94
13	15	2	2.6e+04	-6.6	9.4	10	19	898	908	887	908	0.75
14	15	1.6e-06	0.022	15.3	13.2	1	16	944	959	944	970	0.86
15	15	7.1e-06	0.093	13.3	13.2	1	19	976	995	976	995	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGATCCGACCAGGCCGGTCCGTCGGACGACCAAAATTTTTACCTCCTAGCGCACGCGTTAAACGCCGCGGCTAATCCCCGAACCTGGGACTACTATTCGACGGCTGGAAACGTCGGATACTCGCACGATTCGATGGGCATGTACGCCCAGAACAATCATTCAAACTCTGGTGGGTCCCAGAGTTTCCCGAGCAGCGTTTATCAAGGGTACACTCCGCCCATTCACGAGAGCGCTCCTCCGATAGCCGAGGGATCTCGCTACTTCAAGAGCCACACCCAGTCGCAGGAACTTCCGATGTACAATAATCGCCACGTCAATTACGCTCAGAACGAGTCGGACATTTCGAGCGCGCAATACTCGAATCGAAAAGAGGACACGAGTTTGGCTCACCACTCGAATCTTCACGCGGGCGCGAGTGAATTCATGCCGATGAATATGCCGAAAAGTTCGTCCTCGTACGACGGCACGGACTTCCAATACAACGATTATCCGAATGAGAATCCTCAATCGTCCTCTTCTCACGCGTTCTTCGGCGATAACAGAAATCGCGCGAACGAACGACGCTACGACAATACGAGGAGCAACAATTCTTATCGGGGCTCGTACAAGCCTCAACGTTCGCGCAATTACGAGCAAACCTACGGTGGCTCGAGAGGCAACGGGGATTCGACCAATCACGATGCTCCATCGATAAATCTACAATCGGAGGACAACACTCATCGCGGCGGCACGAAGAACCCCCGAGCTCGCAACAATCACGGTAGATTTACAAACGAGAGATACTCGAACAATCGTCAGCAGCGTGACAACAACGAAAGATCGAGGCCGGACAGACGAAAAATGCAGGTTGATACATGGCAAAATCCCAGCGAGTCTTATCGAGACGCTAAAGCGAGCAACGAGGATTCTCGCGATAACCATAGCGCTTCGAATAACCGCGGAAAGTGGGCGAGAAACGACAGGAGATATCAGAACGATAGATACCCGACCAATACTCGTCAGCAGAGCGACAAGATGCATCAAGCCTCGAACGAGTACGAGGAACAACAGAACTTCGATTCCGCGATCTCGAGCAATCCCGCGATCGGTACGAGACGCGAAATCTCTCACAATCGGGAGACCGAGAGGACTTACAGAAACGAGAGGGGACGCGGCAGACAAAGAGATGCCTCGGCCAATTATGAACCCTCCGggcattcttattacgatcacGAAGGAGATAATCTCGAGAGAGACAATAGCGGTAAATACGATAGATCCAGGGAGGATAACAAGAAATCGCGGGTTTCGCGGGACGAGGAAACTCAAAGCTGGAGACAGAAGGACAGAGCACCCACCAGGAGTGCAATGACGAAGAAGTACAACAAGAAAATCGAATTCGATGATGTTGCCAGCCAGAGAGAACGATTGACCGAGCTATTGAATCAAGGTCACTTGGAGTGTCTCATTTGTTGCGACTACATAAGGCAAAATGATCCGGTTTGGTCCTGCACCAATTGCTATCACGTGCTACATCTTAAGTGTCTGAAGAAGTGGGCACACTCGTCGCAGAGCGAAAATGGTTGGCGATGCCCAGCCTGCCAGAACGTGAGCTTGACCGTCCCCGAGGTGTATTATTGCTTCTGCGGCAAAGCCCGAGCTCCGGAATGGAATCGCCGGGACGTGGCTCACTCGTGTGGCGAAATATGCGGCCGTTTGAGAGCCAAAAACAACTGCGTTCACAAGTGCACGTTGCTCTGTCATCCGGGTGCATGTCCCGAGTGCATAGCCATGGTAACGAGACCCTGCGGCTGCGAAAAAACGTCGCAGAGCCTCAAGTGCAGCACCACGACCCTCGTCGTTTGCGAAGCCAATTGCGAGAAGATGCTCAATTGTCGTATCCACAATTGTGAGAAAAAGTGTCATCACGGTGATTGCGGCCCTTGCGACAAGACGTTGCATCAAAAATGCTACTGCGGAAAGCACGAGCGTGACGTAACGTGCGACGTCGATGTACCGGCGAACTACACTTGCCAGGAAATTTGCGACAAATTACTCGAGTGCGGTAATCATCGGTGCGGGGAAATTTGCCATCCGGGCAGCTGCGAGGCCTGCACGCTGCAACCGTCAACGGTGACGCATTGTTGTTGCGGACAAACGCCACTGACCGTCGAACGCACGACGTGCCTCGATCCGATACCCACGTGCGATAAATCGTGCTCGAAAACATTGAAATGCGGTCAACCTAGCGATCCTCATACGTGCAAAGTCGACTGCCATCCAGGCGATTGTCCCGAGTGCGAGCTGACAACGAAGGTTCGTTGTCGTTGCGGCAACATGGATCGCGAGATCGCTTGCAAAGAGCTCCGTACAAAGGCCGATGATGcgcgttgcgaaaaaaaatgcacgaagaaGCGTTCTTGCGGCAAGCACAAGTGCAACCAGCTTTGTTGCATCGATATCGAGCACATATGTCCGATGCCATGCTCCAAGACGCTCAATTGCGGCAGACACAGATGCCAATTGTGTTGTCACAAAGGCAGATGTCAGCCCTGTCAGGAGATGAGTTTCGACGAGTTGCACTGCGAGTGCGGGGCGTCGGTGATTTATCCTCCGGTGCCTTGCGGCACGCGGCGACCGACTTGCAGTCGTCCCTGCACACGTCAACACTCTTGCGGTCACGAGGTTCTCCACAATTGCCACAGCGACGCGACCTGTCCGCCCTGTACGGTTCTTACGCAGCGATGGTGTTACGGCAAACACGAGCTAAGAAAAGCCGTGCCTTGCCACGTGAACGAAATATCCTGCGGTCTGCCGTGCAACAAGCCGATCTCGTGTGGCAGACACAAGTGCATAACCCTCTGTCATTCCGGTGCTTGCGAAAAGCCCGGCCAAGTCTGCGCTCAACCTTGCACCACTGCCCGTGAGATGTGCGGCCACATTTGCGCTGCACCGTGCCACGACGGCAAGTGCCCGGACACGCCTTGCAAAGAAATGGTCAAGGTCACGTGCACCTGTGGCAACAGAACCATGACGCGTGCGTGTGCCGAAAATTCTCGAGAATTTCAGAGAATAGCGAGCGGCATACTGGCgagcaaaatggcggacatgcAACTCGGTCATTCGGTCGACCTTGAGGAAGTTTTCGGCCAGGGCGCCAAGAAACAGAATCAACTGAAGACCCTCGAGTGCAACGACGAGTGCAAGATCATCGCGAGAAATCGTCGATTGGCCCTCGGCCTTCAGATCGCGAACCCCGATGTTAGCGGCAAACTCATGCCGCGATACACCGAAACCATGAAACAATGGGCGAAAAAGGATCCGCACTTTTGTCAAACGATACACGATCGGCTCACCGAGCTCGTACAGCTCGCCAAAACATCCAAGCACAAATCACGAAGTTACTCGTTCGACAGCATGAATCGGGACAAGCGTAACTTCGTGCACGAGAGCTGCGAACATTTCGGTTGTGAGAGTCAAGCTTATGATCAGGAGCCGAAAAGAAATGTCGTCGCTACCGCGGTCAAAGATAAGTGTTGGTTACCGAGTTATAGCTTATTAGAGATTGTGCAACGAGAAAACGGCCAGCGCAAAGTGCCACGGCCAATGCTCAATTCGTCAAAACCGACATCGACTTTGAGATTGTCGAAAGTGCTATCATCAACTGCCAAGGCAAGTCAGAAGCTGCAGTCCGCAGCTTCCACGTCCTCGAAGTCTCCGGAGGCTGAAATAGATTATTTCGATTTTCCAAATGGCAAAGCCGACAAGTGGCCCACCTTTTAA
Protein Sequence: MATWDGSDQAGPSDDQNFYLLAHALNAAANPRTWDYYSTAGNVGYSHDSMGMYAQNNHSNSGGSQSFPSSVYQGYTPPIHESAPPIAEGSRYFKSHTQSQELPMYNNRHVNYAQNESDISSAQYSNRKEDTSLAHHSNLHAGASEFMPMNMPKSSSSYDGTDFQYNDYPNENPQSSSSHAFFGDNRNRANERRYDNTRSNNSYRGSYKPQRSRNYEQTYGGSRGNGDSTNHDAPSINLQSEDNTHRGGTKNPRARNNHGRFTNERYSNNRQQRDNNERSRPDRRKMQVDTWQNPSESYRDAKASNEDSRDNHSASNNRGKWARNDRRYQNDRYPTNTRQQSDKMHQASNEYEEQQNFDSAISSNPAIGTRREISHNRETERTYRNERGRGRQRDASANYEPSGHSYYDHEGDNLERDNSGKYDRSREDNKKSRVSRDEETQSWRQKDRAPTRSAMTKKYNKKIEFDDVASQRERLTELLNQGHLECLICCDYIRQNDPVWSCTNCYHVLHLKCLKKWAHSSQSENGWRCPACQNVSLTVPEVYYCFCGKARAPEWNRRDVAHSCGEICGRLRAKNNCVHKCTLLCHPGACPECIAMVTRPCGCEKTSQSLKCSTTTLVVCEANCEKMLNCRIHNCEKKCHHGDCGPCDKTLHQKCYCGKHERDVTCDVDVPANYTCQEICDKLLECGNHRCGEICHPGSCEACTLQPSTVTHCCCGQTPLTVERTTCLDPIPTCDKSCSKTLKCGQPSDPHTCKVDCHPGDCPECELTTKVRCRCGNMDREIACKELRTKADDARCEKKCTKKRSCGKHKCNQLCCIDIEHICPMPCSKTLNCGRHRCQLCCHKGRCQPCQEMSFDELHCECGASVIYPPVPCGTRRPTCSRPCTRQHSCGHEVLHNCHSDATCPPCTVLTQRWCYGKHELRKAVPCHVNEISCGLPCNKPISCGRHKCITLCHSGACEKPGQVCAQPCTTAREMCGHICAAPCHDGKCPDTPCKEMVKVTCTCGNRTMTRACAENSREFQRIASGILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIARNRRLALGLQIANPDVSGKLMPRYTETMKQWAKKDPHFCQTIHDRLTELVQLAKTSKHKSRSYSFDSMNRDKRNFVHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPRPMLNSSKPTSTLRLSKVLSSTAKASQKLQSAASTSSKSPEAEIDYFDFPNGKADKWPTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00439892;
90% Identity: iTF_01103952;
80% Identity: -